Cololabis saira (Pacific saury): 133422092
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Entry
133422092 CDS
T09849
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133422092 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133422092 (cpsf4)
03019 Messenger RNA biogenesis [BR:
csai03019
]
133422092 (cpsf4)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133422092 (cpsf4)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133422092 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
133422092
NCBI-ProteinID:
XP_061567979
LinkDB
All DBs
Position
21:complement(27655203..27660254)
Genome browser
AA seq
268 aa
AA seq
DB search
MQDILATVDHIKFDVELAVQQQLGAQPLPFPGMDKSGSAVCEYFVRGACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGTSEQPP
LPQQAQNQTKNMSNMGRSSLSLIQLTNSSPGQRPQHIPNLGQPNNMGMGMGMNRGPRPLD
QVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatcctggccaccgtggaccacatcaagttcgatgtggagctggcggtgcag
cagcagctgggggctcagccgctgcccttccccggcatggacaagtccgggtcggcggtg
tgtgagtacttcgtgaggggagcctgtatgaaaggtgggatgtgtcccttccgccacatc
agcggggagaagacggtggtgtgtaaacactggctcagaggactctgcaagaagggggac
cagtgcgagtttctccatgaatatgacatgaccaagatgcctgagtgctacttctactca
aagtttggcgagtgcagcaacaaagagtgtcccttccttcacatcgatccagagtctaag
atcaaagactgtccgtggtacgaccgagggttctgcaagcacggtcctgactgtagacac
agacacacaaggagggtgatctgtgtcaactacttggtgggtttctgtccagaaggaaaa
tcctgtaaattcatgcacccccgttttgaattgcctatgggaacttctgaacagccgcct
cttccacagcaagcccagaaccagacaaagaatatgtctaacatgggtcggtcgtcactt
tctctaatccaactgaccaactccagtccaggccagcggccgcagcacatcccaaacctg
ggtcagccaaacaacatgggcatgggcatgggcatgaacagaggaccgcgtcctctggac
caagttacctgttacaagtgtggagaaaagggccactatgccaacaaatgtacaaagggc
caccttgccttcctgagtggacagtaa
DBGET
integrated database retrieval system
