Cololabis saira (Pacific saury): 133422097
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Entry
133422097 CDS
T09849
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133422097 (recql5)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133422097 (recql5)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
133422097 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SRI
Helicase_C
RecQ_Zn_bind
RecQ5
TFIIS_M
ResIII
Motif
Other DBs
NCBI-GeneID:
133422097
NCBI-ProteinID:
XP_061567984
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All DBs
Position
21:complement(24793468..24809301)
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AA seq
1013 aa
AA seq
DB search
MASLQDALKTHFGFSNFRSKVQEDVVRAVIRGDRDVFVCMPTGAGKSLCYQLPAVLGQGI
TLVISPLIALIQDQVDHLRELNIPACSINSKLPVAERRLILADLGSSSPKLKLLYITPEM
VASASFQPCLTDLCSRRLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRARLQGVPCLALT
ATAPKNVQDDIVQTLRMSAPLSFVTPVFRKNLYYDVIFRELLPNAYVHLHAFIKTSLALE
SASDGQGCGIVYCRTREGCEVVAHQLTKLGILSKPYHAGLKAGDRTEVQNEWMQGKVLVI
VATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDKEQLNF
LIRQEVGRKQAKRGSAKESDKTAITDLEAMVSFCEQEKCRHATISKFFGNQMPNCAGACD
FCRHPKIVRAQLERAATLSTRTEAASKEPKGPFGFQAGLYEGGRKGYGFERFDSGDEDNG
GDDEGKNRKKHFTELYKRQMHMRKGSDGPREDFVPPDADCLLRDASSQKIPRLTVKTREH
CLYRLQEAVQCQQGEQDAFDCDGLTSAIDIEHEIFRNSKSSNLYKASVLKKVSELKKASS
APVKGEEGEGTSSSTSESKTKLEKDVSSSSSSSSSSLYPEELQGFTLASEVYSMKRKRVG
AGLRGSSNPFLSAKDLLEPSVLDASSDKGKTSGRFLSDCSGESDMRRVGEGIPNAETMSS
IPSSIKARALAISGSLNSPTKGGRALSKKQQKLAEAAKTSRNISQYFAKTEKQTTEKSPD
EAELSNETDSTFSHSPTEVFEENIDQEPDSGKSPAVSQTEDVILIESKTEVVVITDDEKE
KADEEEILNPKDMTSITEQNEPAEEAKPPLIQEFQVKEDVEANLEPPPAKRSRPADKSSR
RVRFNPTVQEKVVKPVSKPPPPATLKEAADIVVRCLDPFYAQGKFANKELFKSFARHLSH
LLAEDKTQGKEQLKAKAKALIKNLFSKVQRCESEADWKHLQRRHSCETKETKE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttacaagatgcgttgaagacccacttcgggttcagcaacttcaggtctaag
gtccaggaagacgtggtgagggcagtcatccgaggggacagggatgtgttcgtgtgcatg
cccaccggggcagggaagtccctgtgctaccagctccctgcggtgctgggtcagggcatt
accctggtcatatcccccctgatcgccctcatccaggaccaagtagaccacctgagggag
ctcaacatcccggcctgctccatcaactccaagctcccggtggccgagcgccgtctgatc
ctggctgacctggggagcagcagcccaaagctgaagctcctctacatcactccagagatg
gtggcctctgcctcgttccagccctgcctgacagacttgtgcagccggcgtcttctgtcc
tacctggctgtggacgaggctcactgcgtctctcagtggggacacgattttagacccgac
tatctcaaactcggcgagctgcgggctcgtttacaaggggttccctgtttggctttgacg
gcaacagcccccaagaatgtacaagatgacattgttcagaccctgaggatgtccgcccct
ctgtcttttgtcacgcccgtcttccggaaaaatttgtactatgatgtgatcttcagggag
cttcttccaaacgcttacgtccacctgcacgcctttatcaagacatccctggcactggaa
agtgcatctgatgggcagggctgtgggattgtgtactgtcgaaccagagaaggctgtgaa
gtcgtggctcatcagctgaccaagctcggcatcttgtccaagccgtatcacgcaggtctg
aaggcaggagatcgcacagaggtgcagaatgagtggatgcaggggaaggtgctggttatt
gtcgctaccatcagctttgggatgggagtagataaagctaatgtcagatttgtagcacac
tggaaccttgctaagtctctggccagttactatcaagaatctgggagagcaggaagagac
ggtctaccctcctcctgccgcacatactattccccaaaggataaggagcaacttaacttc
ctcatccgccaggaagtcggccggaaacaggcaaagcgtggctctgcgaaggagtcggac
aaaactgccatcacagacctcgaagccatggtgtcgttttgtgagcaagaaaagtgtcgc
catgccaccatctccaagttctttggaaaccagatgccaaattgcgcaggtgcctgcgac
ttctgtcgtcaccccaaaatcgtgcgagcccagctggagcgagcggctacgctcagcacc
aggaccgaggcggccagcaaagagcccaaaggaccgttcgggttccaggcgggtctttac
gaaggagggaggaagggttacggctttgaaaggtttgattcaggggatgaagacaacggt
ggggatgatgaaggcaaaaataggaagaagcattttactgagctctacaagaggcagatg
cacatgcggaagggctctgatggtccaagagaagacttcgttccaccagatgccgactgc
ctgctcagggatgccagcagccagaagatcccccggctcactgtgaagaccagagagcac
tgcctgtaccgcctgcaggaggccgtgcaatgccagcagggggagcaagatgcattcgac
tgtgacggtctgacgtctgccatcgatattgaacatgagatcttcagaaatagcaaatcc
agcaacttgtacaaagcctctgttctaaagaaggtgtctgagttgaagaaagcttcatct
gctccagtgaagggagaggaaggagaaggaacaagcagcagtaccagcgaatctaagaca
aaactggagaaagacgtatcctcctcctcctcctcctcctcttcttccttatatcctgag
gagctgcagggtttcaccctcgcatctgaggtctactcaatgaaacgaaagagagtaggg
gcgggcctgagggggtcgtctaaccccttcctgagtgccaaggatctgctggagccttcc
gtgttagacgcatcgtccgacaaagggaaaacgagcggtagatttttgagtgactgctca
ggggagtcggatatgaggagagtcggggagggaataccgaacgcagaaacaatgtcatct
ataccttcatccatcaaagccagagctcttgccattagtggctccctcaacagcccgaca
aaaggaggcagagccctgagcaagaaacaacagaagctagcagaagctgcaaagacttcc
cgcaacatctcccagtactttgcaaagacggagaaacaaacaacggagaagagccccgat
gaggcagagttgtccaacgaaacagatagcactttttctcattctcccactgaggtgttt
gaggagaacattgaccaggagccggattcagggaaaagccctgcggtttctcagactgag
gatgtgatcctcatagaaagtaaaaccgaggtggttgttataactgatgatgaaaaggag
aaagcagacgaagaggagattttgaatccaaaggatatgacgtccatcacggaacaaaat
gaacctgcagaagaagctaaaccgcctttaattcaagagttccaggtgaaagaggatgta
gaggccaacttggagcctcctcccgcaaaacgcagccggcctgcagacaagagcagcaga
agagtgagattcaaccccaccgtgcaggagaaggtcgtgaagccggtcagcaagcctcct
ccgcccgccacgctgaaggaagccgccgatatcgtggtccgttgtctggaccccttttac
gctcagggaaagtttgccaacaaggaactgtttaagtcgtttgctcgccacttgtctcac
cttctagcagaggataagacccagggaaaagaacaacttaaagctaaagccaaagcactc
atcaagaacctcttcagtaaagtccagcgctgcgagagcgaagcagactggaagcacctt
caaagacgacacagctgtgaaaccaaagagaccaaggagtga
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