Cololabis saira (Pacific saury): 133422127
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Entry
133422127 CDS
T09849
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03250
Viral life cycle - HIV-1
csai04144
Endocytosis
csai04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133422127 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133422127 (hgs)
04145 Phagocytosis
133422127 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133422127 (hgs)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
133422127 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
HEAT_Maestro
Adaptin_N
FYVE_2
RasGEF_N_2
UIM
Cnd1
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
133422127
NCBI-ProteinID:
XP_061568012
LinkDB
All DBs
Position
21:11782079..11797303
Genome browser
AA seq
783 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIVAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTIHDEVACKQTMEELKDLLKKQTEPNVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFELLNNHPSLSPPLRKAEGKAPSTG
SADLPPEYLTSPLSQQSQVIPEKMPPKRDEAALQEEEELQLAIALSQSEAEEKERMRQKN
SYSVYPKADPTPVTSSAPPVSTLYSSPVNSSAPLAEDVDPELARYLNRTYWEKKQEEARK
SPTPSAPAPVSLAEPLPPVSQPVETHVPVQPVNIVEQQYQNGESEENHEQFLKALQNAVT
TFLNRMKSNHMRGRSITNDSAVLSLFQSINNMHPQLLEILNQLDEKRLYYEGLQDKLAQV
RDARAALNALRDEHREKMRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQ
EQEKERQMRLEQQKHTIQMRAQMPAFPLPYAQMQSLPPNVAGGMVYQPGAPPSYPGTFSP
AGSVEGSPMHNIYMTQPGQTAPGQYQAMPNPAADPNMVNAYMYQAAGTNGQPAPPPGQAP
PTTCPPYTNYQPTPTQAYQNVVSQAQSMPPMSQPAPSNGMGYMSYQPYNMQNMISALPGQ
DPNMPPQQQYMSGQQPMYQQVAPPGGPQQQQQQQQQQQQQQPQQQQAPQSVPGSTEAQLI
SFD
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaggtggaggaacatttgagaggcttctcgataaagccaccagtcagctgctt
ttggagactgattgggaatctattcttcagatctgtgatctcattcgacaaggagacacg
caagcaaaatatgctattgtggccattaagaagaagctgaatgacaaaaatccccatgtg
gctctttatgcacttgaggtcctggagtcggtggtgaagaactgcggacagacgatacat
gatgaggttgcctgcaaacagaccatggaggaactaaaagatctacttaagaaacagaca
gaaccaaatgtcagaaacaagatcctgtacctgatccaagcctgggctcatgccttccgc
aacgaacccaaatacaaagtcgttcaagatacgtatcaaatcatgaaagtggaaggtcat
gttttccccgagtttaaggagagtgatgccatgtttgcagcagagagagccccagactgg
gttgatgctgaggagtgccatcggtgcagagtccagtttggagttatgacaagaaagcac
cattgtcgagcctgtggtcagattttctgtgggaaatgttcttccaagtactccaccatt
ccaaagtttggcattgagaaggaagtgcgtgtgtgcgagccgtgctttgagctgctcaac
aaccacccctccctctctcctccacttaggaaggctgaaggaaaagccccgtccacaggc
tccgctgacctgccccccgagtacctgaccagcccgctgtcccaacagtcacaggtaatt
ccggaaaaaatgccccccaagagagatgaagcagctctgcaggaggaggaggagctgcag
ctggccattgcactttcccaaagtgaggcagaagagaaggagcggatgagacagaaaaac
tcctactcagtgtatcccaaagcggatcccacccccgtgacttcttctgcacccccagtc
agcaccctttactcttctcctgtgaattcctccgctccactagctgaggacgtggaccct
gaactggcccgctacctgaacagaacgtactgggagaagaagcaggaagaggcccggaaa
agtccaaccccctcggctcctgctcccgtgtcgttggctgagccgcttccaccagtcagc
cagcctgtggaaacccacgtccctgtccagcccgtcaacatagtggagcagcagtaccag
aacggtgaatcagaggagaaccatgagcagtttctgaaggctctgcagaatgccgtcacc
accttccttaatcgcatgaagagcaaccacatgcgtgggcgcagcatcaccaatgacagt
gcagtgctctcactcttccagtccataaacaacatgcacccacagcttctggaaatcctc
aaccaactggatgaaaagagattgtactatgagggactgcaggataagttggctcaggtg
cgcgatgctcgggctgcccttaacgcactccgagatgagcacagagagaagatgcggaga
gctgcagaggaggcagagagacagagacagatccagctggcacaaaagctggaaataatg
aggcagaagaagcaggagtacctggagatgcagaggcagttggctattcagcgtcttcag
gagcaagagaaggagaggcaaatgcgtttggagcagcagaaacacacaatccaaatgaga
gcccagatgcctgcttttccgctaccctatgcccagatgcagtctttacctcccaatgtt
gcgggcgggatggtgtaccagcccggtgctccaccgagttacccgggaacgttcagtcct
gccggctccgtggagggttcacccatgcacaacatctatatgactcagcctgggcagact
gcaccaggacaataccaggccatgcccaaccctgcagcagatcccaatatggttaatgcg
tacatgtatcaggctgcgggcaccaatgggcagcctgctcctcctccaggccaggctcca
cccactacctgtccaccctacaccaactatcagcccacaccaacacaggcctaccagaac
gtcgtctctcaggcacaaagtatgccccccatgtcgcagccagccccctccaacggtatg
ggttatatgagttaccaaccatataacatgcagaacatgatctctgctctgccaggacag
gatcccaacatgcctccccaacaacagtacatgtcaggccagcagcccatgtaccagcag
gttgctccccctggtggcccccaacagcagcagcagcagcagcaacagcagcagcagcag
cagccacagcagcagcaggcacctcagtctgtccccggcagcacagaggcacagctcatc
tcctttgactaa
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