Cololabis saira (Pacific saury): 133422157
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Entry
133422157 CDS
T09849
Symbol
nbr1b
Name
(RefSeq) next to BRCA1 gene 1 protein isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133422157 (nbr1b)
04137 Mitophagy - animal
133422157 (nbr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133422157 (nbr1b)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133422157 (nbr1b)
Membrane trafficking [BR:
csai04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
133422157 (nbr1b)
Pexophagy
Other pexophagy associated proteins
133422157 (nbr1b)
Aggrephagy
Cargo receptors
133422157 (nbr1b)
Xenophagy
133422157 (nbr1b)
Other autophagy associated proteins
Midbophagy
133422157 (nbr1b)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
133422157 (nbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
133422157
NCBI-ProteinID:
XP_061568060
LinkDB
All DBs
Position
21:32183340..32220910
Genome browser
AA seq
1067 aa
AA seq
DB search
MQTADSMEPNINLKVNFRGNYRSLVLTGPESRSWEAVEALVKRSFGLCSLQLTYFDEDNE
EVCVNSQVEYEEALKTAGRQGNRLHMNVSEARGQPARVLATKTSGAEPKRGFRPPQHCPT
LAQVVSRKVQAAVPEQSLVIMKEIKGSKEEDKTPPAWFTSYMEKVKTTFKDQVVREAVEK
ICREFSGQCCIHKPLGGGGVGGGGGGAAAASRGTEAQQVPEVASSTLPGAPTSSTPSCSS
CRGQTTGGGFQCSVCTSCTLCEPCSFSHDPSHNLVRARTPLSIPEHGSPAPDHSRFHRRG
DRSFRKAEKQRLKAEKRLLKAEVKEIRKQLRMERRGIQWSSSHTDGSSSPILLQPRATQH
SSPERPKCPCPMGVPAMMAAFLDENLPDGTRLRPGTKFIKYWKMRNTGTVSWSSDTKLKF
MWGNLAVASGDRWREVSVPFLQPGQVGIVSVALCAPAVDGSYTSHWRLAHNGEQFGPRVW
CSIVVDPQAPAPMLADGILVSPCATPQGRNPAAKEGNTSGDQLLMSVDHEEFCIPSVDLL
TAQDLLSFELLDINIVQELECVPNNTPADVTPCISPLPQDSHLLDKNSPSLGLIREETEV
INSIMDITKGTGSGAEAGGVPAQEEGDHDIGSPCVCETLIRSDTLQEDHGCLKEGPLETS
KVLCPAAEGGSSSASNSPLNQPAVIKPSLSSPPNLSLPAPPALPPVPTPGPSLAAAAMPG
LSSLPAPHPHPPRTQPTEPTATGEGEQSCMKNVSESGVKDKRKEKEGMRSRSSSTSSEDY
IIILPDCFDTTRPLGESMYSSALSQPGDVPEKSMSDSDHLSSDHMANTTKEMELRSTGEV
PEASGMNTVGTSEILHTSEMVDDKPLTPEYLAPPEDLAPPEDLATPEDLAPPEDLAPPED
LAPPEYLAPPEDLAPPEAIITPSSADSGGETDETSAGESDLNTPEEASGSEQTDTGDTEG
DDSGDNQTSAVSGVTEVTGVTGVTGGLVKGALSVAASAYKALLTGQNPAQPPVDPSTQDT
MMAVLVEMGFADRALNQQLLQKHKYNLLDVVNELVQITDNDWYSTHY
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcagacagcatggagcccaacatcaacctgaaggtgaatttcagaggaaac
tacaggagcctggtcctgacggggccggagagccgcagctgggaggccgtggaggccctg
gtgaagcgctccttcggcctctgcagccttcagcttacctactttgacgaggacaacgag
gaggtgtgtgtcaacagtcaagttgaatatgaggaggccctgaagactgcgggccggcag
gggaaccgcctgcacatgaacgtttccgaggcccggggacagccggcgagggtcctggcc
accaagaccagtggagcggagcccaagaggggcttcagacccccccaacactgccccacc
ctggctcaggtggtcagccgtaaggtccaggccgcagtaccggagcagagcttggtcatc
atgaaagagattaaaggatccaaagaagaagacaaaacccccccggcctggttcacttcc
tacatggaaaaggtgaagaccacgtttaaggatcaggtggttcgggaggcggtggagaag
atctgccgggagttctccggacagtgctgcatccacaaaccactcgggggaggaggagta
ggtggaggaggaggaggagcagcagcagcaagtcggggcacagaggcccagcaggttcct
gaggtggcatcttccaccttgcctggagctccaacgtcctccacaccttcttgctcctcc
tgcaggggccagaccaccggaggaggcttccagtgcagtgtctgtacttcctgtactctg
tgcgagccctgcagcttctcccacgatcccagtcacaacctggtgagagcacggaccccc
ctgtccatcccagaacacggatctccggcaccggaccacagcaggtttcacagacgagga
gaccgcagtttccggaaggcagagaaacagcgtctgaaggctgaaaaacgtctactgaag
gccgaggtgaaagagatcagaaaacagctgaggatggagaggcggggcatacagtggagc
tcctcccacaccgatggaagctcctcccccatccttcttcagcctcgcgctacccagcac
agcagccccgagcgcccaaagtgcccctgtcccatgggggtcccagccatgatggctgct
tttctggatgagaaccttcctgatgggacccggttacgtcctggaaccaagttcatcaaa
tactggaagatgaggaacactggaacggtcagctggagctccgacaccaagctgaagttc
atgtgggggaacctggctgttgcgtccggagaccgttggagagaagtgtctgttcccttc
ctgcagccaggacaggttggtattgtgagcgtggcactttgtgctccggcagtcgacgga
tcctacacttctcactggcgtctggcccacaatggagagcagtttggacctcgagtgtgg
tgcagcatcgtggtggacccccaggccccggcccccatgttggctgatgggattcttgta
tcgccctgcgccactccacaggggaggaatccagctgcaaaggagggaaacacatctgga
gatcagctgttaatgtcagtggaccatgaagagttctgcattccctctgtagacctgctc
actgcccaggatcttctgtcattcgagctgttggacatcaacatcgtccaggagctggag
tgtgtccccaacaacacccctgctgatgtgactccctgcatctcccctctgcctcaagac
agccacttgctggacaagaacagcccctctttgggtctgatacgggaggagacggaagtc
atcaacagcatcatggatattactaaagggacaggatctggagctgaagcaggtggggtt
ccagctcaggaggaaggggaccatgacattgggtcaccgtgtgtttgtgagactctgatc
cgctcagataccctccaggaggaccatggctgtctgaaagagggccctctagaaaccagc
aaagtcttgtgtccggctgctgagggtggatcgtcctcggcctccaacagtccactaaac
cagccagctgttatcaagccttccctgtcctccccgccgaacctctccctgcctgctccc
ccagctctgcccccggtaccaacgcctggcccatccttagcggcggccgccatgcccggt
ctgagctccctgccagctcctcaccctcatccacccaggactcagccgacggagcccaca
gccacaggtgaaggtgagcagtcctgcatgaaaaacgtctctgagtctggagtcaaggac
aaacggaaggaaaaagaggggatgaggagccgctcctcctccacgtcttcagaggattac
atcatcatcctccccgactgtttcgacaccactcggccgctgggcgagtccatgtacagc
tctgctctgtcccagcctggagatgttccagagaagtccatgtcagactcagatcatctg
tcttctgaccacatggccaataccaccaaggagatggagcttcgttcaacaggtgaagtt
ccagaggcttcgggaatgaacacggtgggaaccagtgaaatccttcacacgtctgagatg
gtggatgataaacccctgacacctgaatacttggctccacctgaggacttggctccacct
gaggacttggctacccctgaggacttggctccacctgaagacttggctccacctgaggac
ttggctccacctgagtacttggctccacctgaagacttggctccacctgaagccatcatc
acaccaagcagtgcagacagcggcggagagacggatgaaaccagcgctggggagtctgat
ctgaacacacctgaggaagcttctggttctgagcaaactgacaccggcgatactgaagga
gatgactctggagacaaccagacctcggcggtttctggcgttaccgaggtgaccggggtc
accggggtcaccggcgggctggtgaagggggcgctgtcggtggctgcgtcggcgtacaag
gctctgctgaccggacaaaaccctgcacagcctccggtggacccgtccactcaggacacc
atgatggcggtgctggtggagatgggcttcgccgaccgggcgctcaaccagcagctcctg
cagaaacacaagtacaacctgctggacgtggtcaacgagctggtccagatcaccgacaac
gactggtactccacgcactactga
DBGET
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