Cololabis saira (Pacific saury): 133422247
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Entry
133422247 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM16-like isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133422247
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133422247
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133422247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
ANCHR-like_BBOX
zf-B_box
Mt_ATP-synt_D
PilJ
Exonuc_VII_L
GrpE
DUF5344
Osmo_CC
ATP-cone
Apolipoprotein
DUF4407
Gp-FAR-1
YwqH-like
Motif
Other DBs
NCBI-GeneID:
133422247
NCBI-ProteinID:
XP_061568181
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All DBs
Position
21:17729981..17735807
Genome browser
AA seq
508 aa
AA seq
DB search
MVSLSSNIEGNLKEIEYTTSIKEELEDPTVQASDALPLQDVLCDSCMDNPSKALKSCLTC
MVSYCEAHLRPHLENAKFQNHRLVDPLHEIDCQSCEVHRLPLKGFCLLDSCCVCLDCESE
EHKGHTTELLGEARTQMETVLQKKHEEISKTVSAVEEAIGKLQNNNDLIKSSVQEVCVVV
EQQFTRLQTTVEEVRKRVEDELEGEQKQALRQAEGIQAHLEQRRAEFMKILAQMNTLSKS
KSDVDFLQGFSVWEKILADVFVPTVHINRMDYLNSYVQAVTDLTQELCALIFSSYREKIS
IICKNGAKALMPDSQPSTLPDPESHEDFLTYAKNLTFDPDTTHNFLRITEDNKKLTNTSP
WQHSYPYHPSRFEFWRQAMTSDSLYLGRHYIEAELSGEGAHVGVTCKSIDRKGEQSSSCI
TGDDFSWCMGRNSRGFSAWHADVETPLEVTDITRIGLYLDFQRGTVSFYNVTDGVRLLHA
YTAELMEPLYVSVWLSKKDNVVSLIDAK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtctcagcagtaacatagaagggaacttaaaagagatagagtacactacaagt
ataaaggaggagctggaggatcctactgttcaggcatccgatgcactgcccctgcaagac
gtgttgtgcgactcgtgcatggataaccccagcaaagcattaaaatcctgcctgacttgc
atggtttcctactgcgaggcccacctcagaccccatctggagaatgccaagtttcagaac
catcgtctggtggaccccctccatgaaatcgactgtcagagctgtgaggtccatcggctt
cctctgaaaggtttctgccttctggacagctgctgtgtgtgcctggactgtgagagcgag
gagcacaaagggcacacaactgaattactgggtgaagcacgcacacagatggagactgtg
ttacagaagaaacatgaagaaatcagtaagactgtctcggccgtagaggaagcaattgga
aaactgcagaacaataatgatttaattaagtcgtcagtgcaagaggtttgtgttgttgtt
gaacagcagttcaccaggctccagacgaccgtggaggaggtcagaaaaagggtggaggat
gagctggaaggagagcagaaacaggccctgagacaggccgagggcatccaggcacatctg
gagcagaggagagccgagttcatgaaaatactggctcaaatgaacacgctgtccaagagc
aagtctgatgtcgactttctgcagggtttttctgtgtgggagaaaatattggctgatgtt
tttgtgcccactgtacacatcaaccgcatggactacctaaactcatatgtccaggcagtg
actgatctcacacaggagctgtgtgccctcattttctcttcctacagggaaaaaatcagc
atcatttgtaaaaatggtgccaaagccttgatgccagactcccagccttcaaccctgcct
gatccagagtctcatgaggacttcctgacatatgcaaaaaacttaacttttgaccccgac
accacccataatttcctacgtatcacggaggacaacaagaagctgaccaacaccagcccc
tggcagcacagctacccataccaccccagtcgctttgagttctggcgtcaggccatgact
tcggacagcctgtatttgggaaggcactacatcgaggctgagctgagtggcgagggtgct
cacgtcggcgtcacctgcaagagtattgatcgtaaaggagagcagagcagcagctgcatc
accggagatgatttttcatggtgtatgggaaggaacagccgaggtttctccgcatggcac
gctgatgtggagacaccgttagaagtcaccgatatcaccaggatcggtttatatcttgac
tttcaacgaggcactgtgtctttttataatgtcaccgacggtgtgaggctgctccacgcg
tacacggctgagcttatggagcccttatacgtatcagtctggctgtcaaagaaagataat
gtagtttctctgattgatgcaaaatga
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