Cololabis saira (Pacific saury): 133422314
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Entry
133422314 CDS
T09849
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133422314 (si:ch211-106h11.1)
Ion channels [BR:
csai04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
133422314 (si:ch211-106h11.1)
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Gene cluster
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Motif
Pfam:
Pannexin_like
LRR_4
LRR_8
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_EndoS
LRR_LRWD1
LRR_13
LRR_9
Motif
Other DBs
NCBI-GeneID:
133422314
NCBI-ProteinID:
XP_061568254
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Position
21:complement(30344764..30355857)
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AA seq
893 aa
AA seq
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MFSLSEMAPLNQHQNSCKLLKPWWEVFMDYLVVLMLVTSVLACTVQLSRDKVVCIPLDPL
VTENCSNHNVSPSLDVARTPASKSIPQDIGPNLLSEARGRRTHLVYQQYIYISQVCYHVA
LPLSSRFFPYMVLLQSLLLVASGSFWLHFPHTSSRIEQFLSILAKCCESPWTSQSLSHAA
RQESIHELVKGGRRPLQPPPSSGSSSPPETQTQRSSIDSGTDSPVLKRSDCAPSAPPPSP
SPSTLSCNSTMSSITVGSEVHFPSSKPSVTVDSPRHIMCLDKSDGEQARALFERVRKFRS
HCESSAVIYKVYLAQTIFKLFMVTLIISYTIPLLASLSFNHICHPAERALVGYDTFECIH
VLSSLLHKLLVAYLTLLGLYGLLHFYTLAWIFQSCLRQYSFHSLKELWSLRDVPDLTNDL
AFLIHMLDQYDPLLAQRLSVFLSPVSESRLLEESLERLWGEEKLKAMTTVEADGCTRLQL
VALPRLPPALFTLGQLRVLKLELITNARFTAQTANMTSLRELHLYHCVAAVDPSALAVLQ
ERLEVLHITFTQASEIPSWVLSLRSLHELHLSGRLSSEGGVGRSWALGSLRQLRHLRVLV
IRGMLQRIPGELNEVAGSLVTLKINNEGTRLLVLTGLKRMVDLTELQLQDCQLERLPSAL
LALTSLRTLDLQHNKLRTLEELLSLAHLWRLSSLKLAYNRVVALPASVAVLRGLELLDLS
NNQLQSLPPALFTLRRLRKLLLAGNLLEELPSDVKVLQLLTELDLSGNRLESLPSGLFLS
CLELRVLNVAHNSLGSLPSGIAALNQLCRLDLRGNSLEELPVELGCCLGLCGGGLLVENW
LFLSLPPNVRDFLSHSHTTSGRCSEDRSRPDSDFFPYFPPAQWCFSSALESQI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcggagatggctcccctgaatcagcatcagaacagctgtaaactcctg
aagccctggtgggaggtcttcatggactacctggtggtgctgatgctggtgacgtcggtc
ctggcctgcaccgtgcagctgtccagggacaaagtggtctgcatccctttggatccactg
gtcactgaaaactgtagtaaccacaacgtttcaccgagcctggatgtggcccggactcct
gcttcaaagagcattcctcaggacatcggtccaaatcttctctctgaagcgcgaggtcgg
cgtacacatctggtctaccagcaatacatctatattagccaggtgtgctaccatgtggct
ttgccgctgagctcccgcttcttcccctacatggtcttgctgcagtctctactgctggta
gccagcggctcgttctggctccacttccctcacacctcctcccgcattgaacagttccta
tccatcctggccaaatgctgcgagtcgccctggacgtctcagtccttgtcccatgccgcc
cgccaggaaagcatccacgagctagtgaagggggggagacggccactgcagcctcctcca
tcttcagggtcctcttcccccccagagacccaaacacagcgctcaagcatcgactcgggg
acggacagccccgttttgaagaggtcggattgtgcaccctcagcccccccaccatctcct
agtccgtccacgctgtcctgcaactccaccatgtcttctataaccgttggttctgaggtc
cactttccgtcctccaagccttcagtcacagttgacagtccccggcatataatgtgcctg
gataaaagtgatggggagcaggccagagcgctgtttgagagagtcaggaagtttcggtct
cactgcgaaagctcagctgtcatttacaaggtctacttggctcagacaatattcaaacta
ttcatggtgacgctgatcatcagttacaccatccctcttctcgcctccctctcctttaac
cacatctgtcaccctgccgagcgtgcgttggtgggctacgatacctttgaatgcatccat
gtgctgtcctcactgctgcacaagctgctggtggcctacctgaccctgctggggctgtac
ggcctgctgcacttctacacactcgcctggatctttcaaagctgtcttcggcaatattcc
ttccactctctcaaggagctttggtccctcagagacgtcccagacctgacgaacgacctg
gccttccttatacacatgttagaccagtacgaccccttgctggcccagcggctctccgtg
ttcttgtcccccgtaagcgagagcaggctgcttgaggaaagcttggagaggctctgggga
gaggagaaactgaaagccatgaccaccgtggaggccgacggctgcaccagactgcagctg
gtggcgctgccccggcttcctccagccctcttcaccctcggccagctccgggtcctcaaa
ctggagctcatcacaaacgccaggttcactgcacagacggctaacatgacctcactcagg
gagctgcatctttaccactgtgtggcggctgtggatcccagtgcacttgcggtcctccag
gaacgcctggaggtcctgcacatcaccttcactcaggcatcggagatccccagctgggtc
ctgtccctccgcagcctgcacgagctccacctctctgggcgtttgagcagtgagggtggc
gtggggcgtagctgggccctggggagcctacgtcagttgcgtcacctccgtgtcctggtc
attcgaggcatgttgcagaggatccccggtgagttgaacgaggtggcgggcagcttagtg
acactaaagatcaacaacgagggcacgaggctgcttgtgcttacgggcctgaagcggatg
gtggacctgacggagctgcagctgcaggactgccagctggagcgtttgccctctgcactg
ctggctctgaccagcctgcggacattggacttgcagcataacaaattaagaaccctggag
gaactgcttagtctggctcacctgtggcgcctgtcttccctcaagctcgcctacaaccgt
gtcgtggccctgccggcgagcgttgccgttctccgaggcttggagcttctagatctctcc
aacaaccagctgcagagtcttcccccggcactctttactcttcgccgccttcgtaagctt
ctgctggctggcaacctgctggaagagctgccttctgacgtgaaggtgctgcagctgctt
acggagctggacctgagcggtaacaggttggagagtcttccctccggcctcttcctcagc
tgtttggagctacgcgtcctcaacgtggctcacaactccctcggttcattgccaagcggg
atcgcagctttaaatcagctgtgcaggttggatttgcgcggcaatagtctggaagagctg
cctgtggaactgggctgctgtttggggctgtgtggaggaggcctcttggtggaaaactgg
ctgtttctttctttgcctccaaacgtcagggactttctgagccactctcacacgaccagc
ggcaggtgttcagaggatcgttcccggccagattctgactttttcccgtatttccctcct
gcacagtggtgcttctcttctgctctggaatcccaaatatag
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