Cololabis saira (Pacific saury): 133422329
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Entry
133422329 CDS
T09849
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133422329 (srebf1)
04131 Membrane trafficking [BR:
csai04131
]
133422329 (srebf1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
133422329 (srebf1)
Membrane trafficking [BR:
csai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133422329 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
133422329 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
SHNi-TPR
ZapB
Motif
Other DBs
NCBI-GeneID:
133422329
NCBI-ProteinID:
XP_061568269
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All DBs
Position
21:20940558..20957813
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AA seq
1200 aa
AA seq
DB search
MNRLSFDDPSLDNLDATLSLNDPSDIDTALLSDIDDMLQLINNQDMEFGGLFDPSSYSGG
PTTQEVPALSQPIVLASPPAANTTPTSSSTSSILSSNPHLDALLGPPITRSSSTPDKAFQ
PPTFQQSPLAQVAPSSTQKPQPSSPQQAQSVRQPQVEQPQPIVSTATPTQASSPGPNPAF
SPLPQQLFSPPGPQTPAQPQTQPQSRNNFKSQTIYTVGSPSTVSAPATSLSSSPPTVQPV
AIQAQLHGLTTASPILTTASPILTTASPILTTASPILTTASPILTTSTSPPVQAIAPHVQ
QVPVLLQPQFIKAESLLLTTLKPDPCMVTTMASPTSLATTTTAVQSTSLQAFMGGGTILT
TVPVMVDADKLPINRIAITGKTMGQPYKGEKRTAHNAIEKRYRSSINDKIVELKDLVAGT
EAKLNKSAVLRKAIDYIRYLQQANQKLKQENVALKMAAQKNKTLKDLVAMEVDGPTEVKN
ELPTPPASDVGSPTSYSHCSSDSEPDSPMVEDMKPTIGTSDGSEAGGSAGGMLDRSRMAL
CAFTFLFVSLNPLASLLCSGSGSAGGAGDVPRHAGRNVLGVDAEAESWGWMDWMLPTILV
WLLNGVLVSGVLIRLLVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQAIHNLRTCL
KALGRPLPTSQLDLACAALWCFVRFCLQRLWVGRWLAARAGGLRSDRPLQEDACKSSRDA
ALVYHRLHQLHMTGKLTGNHLSAVHMALSGVNLAECAGSCLPVASLAEVYVSAALRVKAS
LPRVLHFTSRVFLSSARQACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYS
QAGNTVDPLAQVTQAFREHLLEKALYCVAQPQGEKSPSQGKGEYADALEYLQLLISASDA
AGATSQSFAIGSNMATVTGCDPHSKWWSSVAVVIINWLQGDDAAAERLYPTVEHLPRSLQ
NSESLLPKACLNTFRAVRTLLSKPENCQLNLSYVDKASTLLRDSLNLGPHCHNSSLDKVV
ELLVCDLLLVMRTNIWHVQQQGTSPAGPGTVGPSSPAGLHQASPPELQGFQQDLSSLRKL
AHTFKPAMRRLFLHEATARLMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQA
EAVMLACRYLPPSFLSAPGQRMGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcctatcttttgacgatccctcgttggataatctggatgcaacattatcgctc
aatgaccccagcgatattgatacagcccttttaagcgacattgatgacatgctccagctt
atcaacaatcaagacatggagtttggtggactgtttgatcccagttcctattcggggggc
cctaccacccaagaggttcctgctttgtcccaacccatcgtcttagcttcacctccagcc
gcaaataccacacctacttcttcatctacttcttcaatcctaagcagtaacccccatctg
gatgctctcctgggccctcccatcacccgtagctcctccaccccagacaaggccttccag
ccgcccaccttccagcagtctcccctggcccaagtagcccctagttctacgcagaaaccg
cagccttcctccccacagcaggctcagagtgtcagacagccccaggtggaacagccccaa
cccatcgtcagtacggctacccctacccaagcgtcctctcctggaccaaatccagcattc
agccctctgccgcagcagctgttcagccctcctggaccccagaccccagctcagccccag
acacagcctcagtcacggaacaacttcaagagtcaaactatatacacagttgggagtccc
agtactgtgagcgcacctgccaccagtttgtcatcctcacctccgactgtccagccagtt
gccattcaggctcagcttcatgggctgaccaccgcctctcctatcctgaccaccgcctct
cctatcctgaccaccgcctctcctatcctgaccaccgcctctcctatcctgaccaccgcc
tctcctatcctgaccacatcaacaagccctccagttcaagccatcgcacctcacgtacag
caagttcccgtgcttttgcagccccagttcatcaaggccgagtccctcctcctcacaact
ctaaagcccgacccgtgtatggttacgactatggcctctcccacatccctggccaccacg
accaccgcagtacagagcacttcactgcaggcctttatgggcgggggcaccatcctgacc
acagtaccagtgatggtggatgctgataagttgcctatcaaccgcatcgctatcactggt
aagaccatggggcaaccatataaaggagagaagcgcacagctcacaacgccatcgagaag
cgttatcgctcttccatcaatgataaaattgtggagcttaaagacctggtggctggcacc
gaggccaagctcaacaagtctgcagtgctgagaaaagcaattgactacatccgttacctg
cagcaagctaaccagaaactcaaacaagagaacgtggcccttaaaatggcagctcagaaa
aacaagactctcaaggacctggttgccatggaggtagatggacccacggaggtgaagaat
gaactgcccacccccccagcctccgatgtgggctccccgacctcttactcacactgtagc
agcgactcggagcccgatagtccaatggtggaggacatgaagccaactataggcacgtcg
gacggatctgaagcaggtggaagtgctggcggcatgttggatcgttcccgcatggcgttg
tgtgccttcaccttcctcttcgtctccctcaaccctctggcttctctgctctgctctggt
agcggctctgcaggcggggctggagacgtcccccgtcacgcaggcaggaacgtcctgggt
gtggatgcagaagctgaatcgtggggctggatggactggatgcttccaactatactggtg
tggctgctgaatggtgttttggtatccggggttctgattcgactgctggtctatggagaa
cctgtaaccagaccacactctggatcatctgtcttgttctggagacaccgcaaacaggct
gatctggaccttgctagaggagattttgctcaggccatccacaacctacggacttgtctg
aaggctctcggccgtcctttgccaacctcccagttggacctagcctgtgcagcactctgg
tgttttgtaaggttctgcctccaaaggctttgggttggccgctggttggctgccagggcc
ggtgggctgcgatctgaccgccccctgcaggaggatgcatgcaagagcagccgtgacgca
gccctggtttaccatcgccttcatcagctacacatgacaggtaaactgactgggaaccac
ctgtcagcggtgcacatggctttaagtggtgtgaacttggctgagtgtgctggatcgtgt
ctgcctgtagcctctctggctgaagtttacgtttctgcagctcttcgagttaaagccagc
ttgccaagggtcttgcatttcacctctcgagtgttcctgagcagtgcccggcaggcgtgc
ctgtcctccagcggcagcgttcctccagccatgcagtggctttgtcatccacttggccac
cgcttctttgtggacggggactgggctattcgcagcacaccgaaagagagcatctacagc
caggctggcaacacggtggatcccctggcccaggtgactcaggcgttcagagaacacctc
ctggaaaaggctctgtactgtgtcgcgcagccccagggggagaagagtcccagccagggc
aagggggaatacgccgacgccttggagtacctccagctgctgatcagcgcttcggatgca
gctggtgccacttcccagtccttcgcgattggatccaacatggctacagtgactggttgt
gaccctcactccaagtggtggtcctctgttgccgttgtcatcatcaactggctccaaggc
gatgatgctgctgcggagaggctctatccaacagttgagcacctgcctcgaagtctgcag
aattcagagagtcttcttcccaaagcttgtctgaacacattcagggcagtcaggactctt
ctctcaaagccagaaaactgccagctgaatctgagctacgttgacaaggccagcaccctc
ctccgagacagtctcaaccttggaccacactgccataactccagtttagacaaggttgtg
gaattgttggtttgtgatctacttttggttatgcggaccaatatctggcatgtgcagcaa
caagggacgagtcctgctgggccggggacggtgggtcctagcagccctgcaggtcttcat
caggcctctccaccagaactccagggctttcagcaagacctgagctccctacgaaagctg
gcacacaccttcaaacctgcaatgagaagattgttcctccatgaagctacagccaggctg
atggcgggggccagtccaaccagaacccatcagcttctggatcgctcactgcgacgcaga
gcaacacctggagctaagacagaggagtgtgagacacgacctggccagcgggagcaggca
gaggctgtgatgctggcgtgccgctaccttcctccctccttcctttcggctccgggccaa
aggatgggcatgctggccgacgcagcccgcacgctggagaaactgggagacaagagaacc
ctccacgactgccagcaaatgatcataaaactgggcagcggcaccaccgtcaccaacagc
tag
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