Cololabis saira (Pacific saury): 133422543
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Entry
133422543 CDS
T09849
Symbol
cacna1ia
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133422543 (cacna1ia)
04020 Calcium signaling pathway
133422543 (cacna1ia)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133422543 (cacna1ia)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133422543 (cacna1ia)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
133422543
NCBI-ProteinID:
XP_061568549
LinkDB
All DBs
Position
21:complement(22478675..22680686)
Genome browser
AA seq
2351 aa
AA seq
DB search
MTSEESPVPLRSISSAGPGQSEECSSAQADDIIEEVGPGDDVSTVSDLSTLVVPFPELAP
VVFFCLKQTTFPRSWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQ
AFDAFIYIFFALEMVIKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSA
IRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLR
NRCYPEKNFTLPSGMALPAPYYQPEEDDERPFICSLGSDNGIMSCLDVPARREGGRVCCL
DKEDALHRQSLGLSPEPLSNGSGAVEAVGLCINWNQYYTRCHTGSSNPHKGAINFDNIVY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETK
QREHQLMQEQRAQCLSSSTLASMAEPGDCYEEIFQLVCHVLRKAKRRSAALYYTLRGKPP
PPGGGRGNRRGGNVNGERHHLKPPRSPRCLHHSKPDRDSQALANSISQNPEDCPLCALSL
KEGVMAVGDLANGEENEEGAVKETDKDESHLEELGDGARKRKRSCFGCCKDLWNDMRRKL
WGIVESKYFSRGIMIAILINTISMGIEHHNQPEELTNVLEICNIVFTSMFTLEMILKLTA
FGFFQYSRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLV
VLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVT
VFQILTQEDWNMVLYNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANR
SYSDDDRSSCNFDENDRQKEPLHFSDPKICTLTPNGHLDMSLLPPGLFPGERLAFALGSR
KNSVISLGRPDLEKRAAYPGRAFHNWGRPLPPHPQALWARRSSWNSLGCRPCSSSSPSAS
PAFTPTSARPFYGYGLGGVGGVVGGSLRVRGPRASAPHHHHHHRHHIQPDEEESLLSPPA
VAPRSLQLPHPMLPGYFAPRRDRRALSLELPHVLHVPNSPPQPHTPPLPVTLYAHPRKKS
LSGGPVISGGGDLEVVHQDCNGKTPLSHLLQLSRGQQSEQTGGANPQRQLMADVFPQVNT
RSKEREDLDDELDYSLCFRIQKMLEAYRPDWCETREDWSIFLFSPRNKFRLMCQAIIAHK
LFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVGEMTLKVVSMGFYV
GPQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGL
KLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGPDVKNITNKSDCLQA
SYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPVTNNNPWMLLYFI
SFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYYAS
YGHIRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPHSLDLALKYCNYFFTSTFVV
ESILKLIAFGFRRFFKERWNQLDLAIVLLSIMGITLEEIEISSALPINPTIIRIMRVLRI
ARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPC
EGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHNTDVDYACNPSLQFISP
MYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGTPSC
GVGGMDKGLLAGGPDPGAAGAKKDRTGARGEKGEALKKMRHVVTTGNQGPYSFHDSNQTL
YSPAQESQWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPPPVCKDCKGHPQEQIRMA
EIEQASLKSELLSDKSSSPALPDDLSLDEHTTSQLLTKEGKRTCSSDSRSSEEAGGEGGH
EGGHQCQTVVQSHVKGQPCRTPCTDADMVTMQQEMELQTHPSHIGSPHYSPEGGVSSSSN
KELNKDGGAGGISTLFHLPGGLFHSAGTSIPVPPRSRSLRLSRGLRLTSPSSWASFSSPG
IHRKMLCAQYPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPPQNLELPLPTVPLPPLCPI
PSHEDRTPISSPVQTLRPRLNPSSAVTLLATKGHQRSQSSGRGSTSPGYTRDDSIDPSDE
DLGIGIGSSIGGCGSSQTGNSEHLSEALSSLSLTSLLSPSSLMCPGGAVKKCNSTGSLDK
GGMLLSSRGREGRREIMGLELMDPQGFLANPWTGVLLDTRGEGGMEIEDGQQDMKGKSSS
QTTVGPCRKNR
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggagagtcctgtgcccttgaggagcatttcctcagcagggccagggcaa
agtgaggaatgcagctcggctcaagctgatgacataattgaggaagtgggtccaggtgat
gatgtcagtaccgtcagcgacctgagcactcttgtagtgcccttccccgagctggcacct
gttgtcttcttctgcctgaagcagaccaccttccctcgtagttggtgcatccgtatggtc
tccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacgctg
ggcatgtaccagccttgcgagaacatcgattgcacctcggaccgctgccagatactacag
gcctttgatgcattcatctatatcttctttgccttggaaatggtgataaagatggtggct
ctcgggatctttggccgtcgctgttacctgggagacacctggaacagactagacttcttc
attgtcatggctggcatggtggaatactcactagacctgcagaacatcaacctgtcagcc
atccggactgtgcgggtccttcgaccgctaaaagccatcaacagagtgccaagtatgcgt
atcctggtgaacctgctgctcgacaccctacccatgctgggcaacgtgctgctgctctgc
ttctttgtcttcttcatctttggcatcatcggtgtgcagttgtgggcggggctactgaga
aaccgttgctatcctgagaagaacttcaccctcccttcgggcatggccctgccggctccg
tactaccagccggaggaagatgacgagcgccccttcatctgctccctgggatctgataac
ggcatcatgtcatgtttggacgtgccagcgaggcgagaaggaggacgcgtatgctgtctg
gacaaagaagatgctctgcacagacagtctctgggcctgagtcccgagcctctgtccaac
ggcagcggtgcggttgaagcagtgggtctgtgcatcaactggaaccagtattacacccgc
tgccacactggaagtagtaaccctcacaaaggcgccatcaattttgacaacatcgtctac
gcctggatagttatttttcaggtgatcactttggagggctgggtcgagattatgtattac
gtcatggatgcccactccttctacaacttcatctacttcatccttctcatcattattggt
tctttcttcatgatcaacctgtgcctggtggttattgccacccagttctctgagaccaag
cagcgggaacaccagctgatgcaggaacagagggcccagtgcctgtcctcctccaccctg
gccagcatggctgagccgggagattgctacgaggagatcttccagctggtctgccatgtt
ctccgcaaagctaagagaagatcagcagctctgtactacacgctgaggggcaagccccca
ccgcctggtggaggcaggggtaacaggcgaggaggaaatgtgaacggcgagcgccatcat
ttgaagcccccaagatcgcccagatgtctgcaccacagcaagccggaccgcgactcgcag
gcgctcgccaactccatcagtcagaatcccgaggattgccctctgtgcgcgctgtcattg
aaagaaggcgtgatggctgtgggagatttagcaaatggtgaagaaaatgaggagggtgct
gtgaaggaaacggacaaagacgagagccacttagaggagctgggtgatggagcaaggaag
cggaagaggtcatgctttggatgttgtaaagacctttggaatgacatgaggaggaaactt
tggggcattgtggagagcaagtacttcagcagaggaataatgatcgccatactcatcaat
accatcagtatggggattgagcatcataatcagcccgaggagctgactaatgtcctggag
atctgcaacatcgtcttcaccagcatgttcaccctggagatgatcctcaagctcacagcc
tttggcttctttcagtactctaggaacccgtataacatctttgatggaatcattgtcatt
atcagtgtgtgtgagatcatcggccaggcagatggaggtctgtcagtcctgaggaccttc
aggctgttgagggtcatcaaactggtgaggttcatgcccgcgctgaggcggcagcttgtg
gtgctgatgaagaccatggacaacgtagccacattctgcatgctgctcatgctctttatc
ttcatcttcagtattttggggatgcatatatttggctgtaagttcagcttgaagacagag
gcgggagacaccgtccccgacaggaagaattttgactccttgctttgggccatagtcacc
gtcttccagattctgactcaggaggactggaatatggtgttgtacaacggcatggcctcc
acttccccctgcgctgccctctacttcgtagctctaatgacctttggaaactatgtgctc
ttcaatttactcgtcgccattctggttgaaggtttccaagcagagggtgatgcaaaccgc
tcttattcagatgatgacaggtcttcctgtaattttgacgagaatgataggcaaaaagaa
cctctgcatttttcagatccaaagatctgtactctgacccctaatggacacttggacatg
tccctgttgcctcctggtctgtttcctggtgagcggttggcctttgcacttggctcaaga
aagaacagtgtcatttctctcggcagacctgacctggaaaagagggctgcgtatccaggt
cgagctttccacaactggggccgtccacttcctccacacccccaagccttatgggcccgt
cgttccagctggaacagcctcgggtgccgcccctgctcctcctcatctccgtctgccagc
cccgccttcactccaacctctgcaaggcccttctacggttacggcctcgggggtgtggga
ggagtggtgggaggaagccttcgtgtccgtggtccccgtgcctctgcacctcatcaccac
catcatcatcgccaccacatccagccagatgaggaggagtccctgctctcgcctccagct
gttgctccccgctctcttcagcttccccatcctatgctccctggctactttgcgccgcgg
agggaccgcagggctctctccttagagctcccccacgtcctgcacgttccgaactctccg
ccacagccgcataccccaccacttcctgtgacgctctatgctcacccccggaaaaagagc
ctctctggaggaccagtaatcagcggtggaggcgatttggaagtggttcaccaggactgt
aatggaaagaccccactgtcacacctcctccagctgtctcggggacaacagtccgaacag
accggaggggcaaacccccagaggcagctgatggctgacgtctttccccaggtcaacacg
cgcagcaaggagcgggaggacctggatgatgaacttgactatagcttgtgctttcgcatc
cagaaaatgttagaagcctacagaccggactggtgtgagacgagagaagattggtccatc
ttcctcttctccccgcggaacaagttcagactgatgtgccaggccatcatagcccataag
ctgtttgattatgtggtgctggccttcatcttctccaactgcatcactgtggctctggaa
aggcctaagatactacagggcagtttggaaagagtctttctcaccatctccaattacatc
tttactgccatctttgtgggcgagatgactctcaaggtggtttccatgggtttttacgtg
ggaccacaggcgtatctgcggagcagctggaacattttggatggattcctggtttttgtg
tcgctgattgacatcgtggtgtccatggcgggaggtgccaagatcctgggtgtgctcaga
gtgctccggctgctcaggacattgcgtccgctcagagtgattagcagagctcctggactg
aagctggtggtggagactctcatcacatccctaaaacccatcggcaacattgtcctcatc
tgttgtgcgttcttcatcatcttcggcattcttggagtacagctttttaaaggcaaattc
ttctattgcctcggccctgacgtcaaaaatatcaccaacaagtctgactgcctccaagca
agctacaagtgggtccaccataagtacaactttgataacctggggcaggctcttatgtcc
ctatttgtactggcctccaaggacggttgggtcaacatcatgtaccatggcctggacgca
gtcggtgtggaccagcagccggtgaccaacaacaacccatggatgctcctgtatttcatc
tccttcctcctaatcgtcagctttttcgtgctcaacatgtttgttggagtggtggtggag
aacttccacaagtgccgccaacaccaggaggtggaggaggccaagaggcgtgaggagaag
cgtcagcgtcgcatggaaaagaaaagaaggaaggcgcagaagcttccgtattacgccagc
tatggacacattcgcctgatgatccacacactctgcacaaaccactatctggacctcatc
atcaccttcatcatctgcatcaacgtcatcacaatgtccttagagcactacaatcagcct
cactctctggatctagccctcaagtactgcaactacttcttcacctccacgtttgtggtg
gaatctatactcaagctcatcgcgtttggattccgtcgcttcttcaaagagaggtggaac
cagctggatctggccattgtgctcctgtcgataatgggcatcactctggaggagatcgag
atcagctctgccctgcccatcaaccccaccatcatcagaatcatgagagtcctgaggatc
gcacgagtgctgaagctgctgaagatggctacgggaatgagagctttgttggatacagtg
gtccaagccctgcctcaggtgggtaacctgggcctgctcttcatgctgctgtttttcatc
tacgccgccttaggagtagagctgtttggagaacttgtttgcaatgaggactacccatgc
gaaggcatgagtcgtcacgctacctttgagaactttggtatggcctttctcaccttgttt
caagtctccacgggcgacaactggaatggcattatgaaggacacattgcgggaatgccca
ccagatcacaacacagacgtggactatgcctgcaatccgagccttcagtttatctcgccc
atgtactttgtctcctttgtgctcaccgcccagtttgtgctcatcaatgtggtggtggcc
gtgctgatgaagcacctggacgactccaacaaggaggcccaagaggaggcggagatggat
gcggaaattgagctggagctggcccagggcaccctctgttgcatgggcacccccagttgc
ggggtcggaggcatggacaaaggactactcgctggcgggccggaccccggagcagcaggg
gcgaaaaaggacagaacaggtgccagaggggagaagggggaagcattgaagaaaatgcga
cacgtagtaacgactgggaaccagggaccttacagcttccacgattccaaccagacctta
tactcaccagcacaggagagccaatggttggacagcgtctctctcctaatcaaggatacg
ttagaaggggagatgctgatgatcgacaacctctccggctctgttttccaccattactcc
tctcctccgccggtctgcaaagactgcaaaggccatccacaagagcagatcagaatggca
gaaattgagcaggcctcgctaaagtcagagctactgtcagacaagtcttcctcccctgca
ctgcctgacgacctcagcctggacgaacatactaccagccagctgctgacaaaagagggc
aagagaacgtgcagcagtgactcccgcagctctgaggaggctggaggggaagggggtcat
gaaggaggtcaccagtgtcagacggtggtgcagagtcacgtgaagggacagccatgcagg
accccctgcactgacgctgacatggtgaccatgcaacaggagatggagctgcaaacacac
ccgtcccatataggttcccctcactacagccctgaaggtggtgtttccagcagcagcaac
aaggaactaaacaaagacggaggagctggcggtatttctacgctcttccatctgcctgga
gggctcttccactctgcaggtacaagcatcccggtacctccccgcagtaggagcctgcgt
ttatcaaggggccttagactgacatccccgtcttcctgggcctcattcagctcccctgga
atccatagaaagatgctctgtgcacagtacccgtcccacagtgactcatccctggcgaca
ggcagctctgagggcagccttcagaccaccctggaagaaggactgagcttcagtgtctct
ccacctcagaacctggagttgccactgcctacagttcccttaccacctctgtgccctatc
ccttcgcatgaagacagaactcccatctcctctcccgttcagaccctgaggccacggctg
aacccttcatctgccgtaacccttttagccactaagggccatcaacggagccagagcagc
gggcggggcagcactagcccggggtacacccgcgatgactctatcgacccctcggacgag
gacctcggcataggcatcgggtcgtctatcggcggctgtggatccagtcagacgggcaac
agcgagcacttgtcggaggcgctgagcagcttgtctctgacgtccctgctgtcgcccagc
tccctcatgtgcccgggaggggcggtgaagaaatgcaacagcacaggcagcctggacaaa
gggggcatgctgctgtcttcccggggcagggaaggccgcagggagattatgggcctggag
cttatggaccctcagggcttcctggccaacccttggacaggcgtattacttgatacaaga
ggagagggaggaatggaaattgaagacggacaacaggatatgaaagggaaaagctcaagc
caaacaacagttgggccttgtcgaaaaaacagatga
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integrated database retrieval system
