Cololabis saira (Pacific saury): 133422604
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Entry
133422604 CDS
T09849
Symbol
ddx39ab
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133422604 (ddx39ab)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133422604 (ddx39ab)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133422604 (ddx39ab)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133422604
NCBI-ProteinID:
XP_061568604
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All DBs
Position
21:complement(30335642..30342010)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPESAAPTGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLAIKKDEDVLKKNCPHIVVGTPGRILALIR
NKTLALKNVKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYSKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgatgttgataacgagctgctcgactacgaggaggacgaggagccccag
ggagcccccgagagtgcagcccccacagggaagaaggaggtgaagggatcctacgtctcc
attcacagctccggcttcagggacttccttctcaagccagagctgctccgcgccatcatc
gactgtgggtttgagcatccatctgaagttcagcatgaatgcattccacaggccatcctg
ggcatggacatcctgtgccaggccaaatctggtatgggcaagactgccgtgtttgtgtta
gcaacactacaacagatcgagccggttgatgggcaggtgtctgtattggttatgtgccac
acacgagagctcgccttccagatcagcaaagagtacgagcgtttctccaagtacatgccc
actgtaaaagcagccgtattcttcggtggtctcgccatcaagaaggacgaggacgtcttg
aagaagaactgccctcacattgtggtcggaacgccaggtcggatactcgctctgatccgc
aacaagaccctagccctgaaaaacgtcaagcattttgtcctggatgaatgtgacaagatg
ctggagcagctcgacatgaggcgtgacgtccaggacatcttcaggatcacgccccacgag
aagcaggtcatgatgttcagtgccacgctgagcaaggagatccggccggtctgccgcaag
tttatgcaggatccgatggaggtgtttgtggatgacgagaccaaacttacgctccacggc
ctacaacagtactactccaagctgaaggacagcgagaaaaaccgcaaactctttgacctt
cttgatgtgttggagttcaatcaggtggtgatctttgtcaagtcagtgcagcgctgcatc
gctctgtctcagctgctggtggagcagaacttccctgccattgctatccacagagggatg
gctcaggaggaaaggctgtcccgctatcaacaattcaaggacttccaaaggcggatcttg
gtggccactaacctcttcggcagagggatggacattgaacgagttaatatcgtcttcaac
tatgacatgccagaagattctgacacctatttgcacagggtggcccgtgctggaaggttt
ggcaccaaaggcctagctataacctttgtgtctgatgaaaccgatgccaagactctgaat
gatgtgcaggaccgctttgaggtcaacgtggccgagctgccagatgagattgacatctcg
tcttacatcgagcagtcgagatga
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