Cololabis saira (Pacific saury): 133422915
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Entry
133422915 CDS
T09849
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133422915 (zeb1b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
133422915 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
Zn_SUZ12
zf-C2H2_6
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
133422915
NCBI-ProteinID:
XP_061568931
LinkDB
All DBs
Position
22:complement(5779137..5857315)
Genome browser
AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQANPRRTHVTNYNNVVEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
DEHPGGPSWDPVKEDCASDGEDDGSTDALVEEMLQQGDTAVIYPEAPEDELQRQGTPDTN
IHDENAGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQ
LERHMTVHKSGRDQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCK
KRFSHSGSYSSHISSKKCISVISVNGRQRLGGVKNQIQGLTPMLPTSPSTLCTQIREKLE
HSKPLQEQLPVTQIKTEPVDYEYKPSLMAPPALAAMNGGMFGGGAAAPLQGTVQAVVLPT
VGLVSPISINLSDLQNALKVAVDGNVIRQVLENNAKGQVTSGLTTATLHTPQQQLFSAIS
LPIVGQDGNAKIIINYSLDPNQGQITANNLKRERDTGSPAQPGADAFKAQKLPEDLTIRG
GRIHEKKEKEDTTTKSCLLCDTCPGGGLDALKHCKKEGLRLNGAGLDKDKSAVAALLAEG
GLCKQPKNLLSLLKAYFALNAEPSKDELAKISDSVSLPVPVVKKWFDKMQEGQICLGAPT
PPSEEEDACDGQGVVSLVPGKDAATMSPSVSRDSPTEASPAEANGPHSSPAPPSPLNLTA
GGPVPADAPQSTEGPLDLSLPKPAREEVEKVSSKAHVYPSARAGAATEEEPLNLTCTRKD
ASPLSALGGSPVSMYASQPGAKPLDIVTTMHCLRALATTNKQTILIPQLAYTYTTTASSP
AGSDSHDTLHLNGVKEERQDISLEGISTMEEQNDSDSGPGRKKMKKTDNGMYACDLCDKI
FQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHS
GSYSQHMNHRYSYCKKETQSQAGGPESPAEDEGEARPDMEALGLGLDLGLDLDLGLGQAE
RQHTAPSLLDLDERGSSTREDEESEEEEEEEEGAVDMDDIQVVQIGDEGGDEGGDEEEQA
EEQAEGGAMDKEGEEETIEMEEKEEAPTRLEEEPGSIQEQEEANMKEDEPMDTEEVTGEA
EGEVTEEREGDTGGSAASEDEQEEKEKDTDSK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgcggaggacccacgtg
actaactacaataatgtggtggaggctggctccgactcagatgatgaggacaagctgcac
attgtggaggaggaaggcagcctggccgacggggccgactgcgacagcaccctgccggac
gacgagcaccccggggggccgagctgggacccagtgaaggaggactgtgcttcggacggc
gaggatgacgggagcacggacgccctggtggaggagatgctccagcagggagacacggcc
gtcatctacccagaggccccggaggacgagctgcagcgccagggcacccccgacaccaac
atccacgatgagaacgcaggaactcctgactccttctcccagctgctcacctgcccctac
tgcgcccgcggctacaagcgctacagctccctgaaggagcacatcaagtaccggcacgag
aagacggaggagagcttcagctgcccggagtgcagctacagcttcgcctacagagctcag
ctggagaggcacatgacggtgcacaagagcgggcgggaccagaggcacgtgacgcagtcg
ggaggcaaccgtaaattcaagtgcaccgaatgtggcaaagcatttaagtacaagcaccac
ctgaaggagcacctacgcatccacagcggagagaagccctacgagtgctccaactgcaag
aagcgcttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcagc
gtcatctcggttaatggccgccagcgcctggggggcgtcaagaaccagatccagggcctg
acgccgatgctgcccacgtcgccctccaccctgtgcacccagatccgggagaagctggag
cacagcaagcccctgcaggagcagctgcccgtcacccagatcaagaccgagccggtggac
tacgagtacaagccctcgctgatggcgccgcccgccctggccgccatgaacggggggatg
ttcggcggcggggcggcggcccccctgcagggcacggtccaggcggtagtgctgcccacg
gtggggctggtgtcccccatcagcatcaacctgtccgacctgcagaacgccctcaaggtg
gcggtggacggtaacgtcatccgccaggtgctggagaataacgccaagggccaggtgacg
tcggggttgaccaccgccacgctgcacacgccgcagcagcagctcttctccgccatcagc
ctgcccatcgtggggcaggacggaaacgccaaaatcatcataaactacagcctggacccc
aaccagggccagatcaccgccaataacctgaagagggagagggacacggggtcccccgcc
cagcccggcgccgacgccttcaaggcccagaagctcccggaggacctcaccatccggggc
ggcaggatccacgagaagaaggagaaagaggacacgaccactaaaagctgcctcctgtgc
gacacctgtcccggcggcgggctggacgccctcaagcactgcaagaaggaggggctccgg
ctgaatggagcgggactggacaaggacaagtccgccgtggcggccctgctggcggagggg
ggcctctgcaagcagcccaagaacctgctgtccctgctcaaggcctacttcgccctgaac
gcagagccctccaaggacgagctggccaagatctccgactccgtcagcctgcccgtcccc
gtggtcaagaagtggttcgacaaaatgcaggagggccagatttgcctgggcgccccgacg
cctccctccgaggaggaggacgcctgcgacggtcagggggtggtgtcgctggtcccgggg
aaggacgccgccaccatgagcccctcggtgagccgggacagccccaccgaagccagcccg
gccgaggccaacggcccccacagctccccggcacccccctcgccactaaacctgacagca
ggcggtcccgtcccggccgacgccccgcagagcactgagggacccctggacctgtcgctg
ccaaagccggccagagaagaagtggagaaagtgtcgtctaaagcccatgtttacccgtcg
gctcgcgccggcgccgccaccgaggaggagcctctgaacctaacttgcacaaggaaagac
gcctcgccgctctcggccctggggggcagccccgtgagcatgtacgccagccagcccggt
gccaaacccctcgacattgtgaccaccatgcactgcttaagagcactagccaccaccaac
aaacagactatcctcatcccccagctggcctacacctacaccactacagccagcagccct
gcaggcagcgactcgcacgacacgctgcacctcaacggagtcaaggaggagaggcaggac
atcagcttggagggaatttccaccatggaggagcagaacgactcggattccggccccggc
cggaagaagatgaagaagacggacaacggcatgtacgcctgcgacctgtgcgacaagatc
ttccagaagagcagctcgctgctgagacacaaatacgagcacacagggaagcggcctcac
gagtgcggcatctgcagcaaggccttcaaacacaagcaccacctgatcgagcacatgcgg
ctgcactcgggggagaagccgtaccagtgcgacaagtgcgggaagaggttctcccactcg
ggctcctactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcagagc
caggcgggggggccggagagccccgcggaggacgagggcgaggcccggcccgacatggag
gccctgggcctgggcctggacctgggcctggacctggacctgggcctgggccaggcggag
cggcagcacacggcaccctccctgctggacctggacgagcgagggagcagcacccgggag
gacgaggagagcgaggaggaggaggaggaggaggaaggagccgtggacatggacgacatc
caggtggtccagataggggacgagggaggggatgaaggtggggacgaggaggagcaggcg
gaggagcaggcggagggaggagcgatggacaaggagggagaggaggagacaatagagatg
gaggagaaagaggaggctcccacgaggctggaggaggaaccggggagcattcaggaacaa
gaagaagccaacatgaaggaagacgagccaatggatacagaagaagtgactggagaagcg
gagggagaggtcacggaggagagggagggggacacgggtgggagcgcggcttctgaagac
gagcaggaggagaaagagaaagatacggactcaaagtga
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integrated database retrieval system
