Cololabis saira (Pacific saury): 133423172
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Entry
133423172 CDS
T09849
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133423172
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133423172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
133423172
NCBI-ProteinID:
XP_061569300
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Position
22:complement(25798100..25918716)
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AA seq
797 aa
AA seq
DB search
MGVRPHPPAVVSTLLPLTLGILTVLPQSLLGNPAEEGNAGSSALLQRVKRGWVWNQFFVL
EEYTGLEPLYIGKLHSDMDKGDGSIKYILSGEGAGTTFTIDDGTGDIHAIQRLDREVKSQ
YVLRAQARNRLTDRPLEPESQFIVKIQDINDNEPKFLDGPYQASVPEMSKIGTSVLQLTA
TDADDPTYGNSARVVYSVLEGQPYFSVDAKTGVVRVSLADMDRETRENYTVVIQAKDMGG
QLGGLAGTTTVNITLSDINDNPPVFDQRLYQMSVPESAPVGTAVGRIWAKDKDIGVNAQM
KYSIIDGDGRDSFDVTTDPTNLFGVIMVKKMLDFEKKRSYTLKVEGVNTHLDPALRHTGP
FKDVTIVHVSVEDVDEPPAFDSPAYLVELSEDAAPGTVVKTLSAWDPDAANNTVRYSIER
SSDPDKFFYIEITSGLLMTARPLDREEIGWHNITVLAMEMNNPTQIASVLVAVKVLDVND
NAPSLTHYLETYVCENTKAGQLIQTVTAVDLDEPMGGQHFYYSLAPEAANNPNFTLRDNQ
DNTAWILTRRAGWSQQDQSVFYLPIFVSDGEQPVRSSTSTLTIRVCSCDQEGNVMSCNAE
AYSLPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEENVHENIVRYDDEG
GGEEDTEAFDIAAMWNPREVHHFGKLRQDMLPEIESLSRYVPQARVVGGGGGGEGNVHGY
VMAKLLEADVDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGTSNTDHEYDYLNDWGPRFK
KLAEMYGVLDTNSPPMW
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgggagtccgaccgcatcccccggccgttgtgagcactttgctccctctgacccttggc
attctgaccgttctgcctcaaagcctcctgggtaacccggcagaggagggaaacgctgga
agctcggcgctgctgcagagggtgaagcgaggctgggtgtggaatcagttctttgtcctg
gaggagtacaccggactggagccactttatattggaaagctccactccgacatggataaa
ggtgacggctccatcaagtacatcctgtcgggtgagggcgccggcaccaccttcaccatc
gacgacggcaccggggacatccacgccatccagaggctggaccgcgaggtcaagtcgcag
tacgtcctccgtgcccaggcccggaaccgcctgaccgacagaccgctggagcccgagtcc
cagttcatcgtcaagatccaggacatcaacgacaacgagcccaagttcctggacgggccc
taccaggcgtcggtgcccgaaatgtccaagataggaacatctgtgctccagctgaccgcc
acagatgccgacgaccccacgtacggaaacagcgcccgtgtggtctacagcgtcctggag
ggccagccctacttctcggtggacgccaagaccggcgtggtgcgggtgtccctggccgac
atggaccgggagacccgggagaactacaccgtggtcatccaggccaaggacatgggcgga
cagctggggggcctcgccggcaccaccaccgtcaacatcacgctcagcgacatcaacgac
aacccgcccgtgtttgaccagaggctctaccagatgagtgtgccggagtcggcgccggtg
ggaacggccgtgggtcgcatctgggccaaggacaaggacatcggggtcaacgcccagatg
aagtacagcatcatcgacggggacgggagggacagcttcgacgtcaccacggaccccacc
aacctctttggcgtaatcatggtgaaaaagatgctggactttgagaagaagcgcagctac
acgttgaaggtggagggggtcaacacccacctggacccggcgctgcgccacaccgggccc
ttcaaggacgtcaccatcgtccacgtgagcgtggaggacgtggacgagccgccggccttc
gactcgccggcgtacctcgtggagctgtccgaagatgctgcgcccgggacggtggtgaag
acgctgtcggcgtgggacccagacgccgccaacaacaccgtcaggtactccatagagagg
tccagcgaccccgacaagttcttctacatcgagatcacgtccgggctgctgatgacggcg
cgcccgctggaccgggaggagatcggctggcacaacatcaccgtcctcgccatggagatg
aataaccctacgcagatcgcaagcgtgttggtggctgtgaaggtcctggacgttaacgac
aatgctccctcactgacgcactacctggagacgtacgtgtgtgaaaacaccaaagcagga
cagctgattcagacagtgacggcggtggatcttgatgagccgatgggcggtcagcacttc
tactacagtctggctccagaagctgccaacaaccccaacttcacactgagggacaaccaa
gacaacacagcgtggatcctgacgcggcgcgccggctggtcgcagcaggaccagagcgtc
ttctacctgcccatcttcgtctccgacggcgagcagccggtccggagcagcaccagcacg
ctgaccatccgcgtgtgcagctgcgaccaggagggcaacgtgatgtcgtgcaacgccgag
gcctacagcctgccggccagcctcagcagaggggcgctcatcgccatcctggcctgcatc
ttcgtcctgctggtgatgatcttgctgatgctgtctctgcggacgcaccgtaagaagccc
tacctgtgcgacgaggaggagaacgtccacgagaacatcgtgcgctacgacgacgagggc
ggcggcgaggaggacaccgaggccttcgacatcgccgccatgtggaacccgcgcgaggtg
caccacttcgggaagctgaggcaggacatgctgccggagatcgagagcctgtcccgctac
gttcctcaggcgcgcgtcgtgggcggcggaggcggcggcgagggcaacgttcacggctac
gtgatggccaagctgctggaggccgacgtggacccgtgtgcgccgccctacgactcgctg
cagacctacgcctacgagggcgaaggctccgtggccgagtcgctcagctcgctgcagtcg
gggacgtccaacaccgaccacgagtacgactacctgaacgactgggggccgcgctttaag
aagctcgccgagatgtacggcgtgctggacacgaacagcccccccatgtggtag
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