KEGG   Cololabis saira (Pacific saury): 133423299
Entry
133423299         CDS       T09849                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133423299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csai03041]
    133423299
Spliceosome [BR:csai03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133423299
 Complex B
    133423299
SSDB
Motif
Pfam: RRM_1 DUF1543
Other DBs
NCBI-GeneID: 133423299
NCBI-ProteinID: XP_061569462
LinkDB
Position
22:complement(24866022..24877016)
AA seq 540 aa
MAVTDTAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAYNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTSGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLGQQMGIPQAVMAAQAPGVITGV
TPVRPPIPVIPQVGLVNPVLASPPVLSNPAAGSNQQEKKEEKEELLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIY
QEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcggtaacggacactgcgggaggagaagctctgacaatggagaatggacagggcaca
ggctccaagcttggcctaccgcctctcaccccagagcaacaggaggcacttcagagggca
aagaaatatgctatggaacaaagcatcaagagtgtcttggtgaagcagaccattgcccat
cagcaacaacaactcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcagcgtgcactggcgatcatgtgtcgg
gtgtatgtgggctccatatactacgagctcggcgaggataccatcagacaagcctttgcc
cccttcggcccaatcaagagcattgacatgtcttgggattcagttacaatgaaacacaag
gggtttgcttttgtggagtatgatgtgccagaagctgctcagctggccctggagcagatg
aactcagtcatgttgggggggcgaaacattaaggttgggcggccaagtaacatcggtcaa
gcgcagcccatcattgaccagctggcagaagaggctcgcgcttataaccggatctacgta
gcgtctgtccaccctgacctgtcagacgatgacatcaagagtgtgtttgaggccttcggg
aggataaagtcttgcacgttagccagagaccccacgtcagggcgacacagaggctttggc
ttcatcgagtatgaaaagcctcagtcagccctggatgctgtgtcttctatgaacctcttt
gacctggggggtcagtacctacgggttggcaaagcagtgactccacccatgcccttactg
acccccacaactccaggtgggctgccgcctgctgcagctgtggctgcagcggcagccacc
gctaaaataacggcccaggcaagtatgaatcccttccaaagggatttaatggcctttcag
gaggccgtagctggcgcgtcagttttgggagcattagctgcaccccaacttctcggtcaa
caaatgggaatacctcaagccgttatggccgctcaggcgccaggggtcattacaggtgtg
actccagtgcgtcctcccataccagtgattccacaagttggtcttgtgaacccagttctt
gcgtctccgccagtcctgtctaacccagctgctggctcgaaccaacaggagaagaaagaa
gagaaagaggagctgcttcaggatggtacagggcaggagatgcttagtgatcaagagcac
atgagcatctcaggcagcagtgccagacatatggttatgcagaagttgctcagaaaatca
gagtccacagtgatggtccttcgaaacatggtcggacccgaggacatcgatgacgacctg
gagggagaggtgacggaggagtgtgggaagtttggcactgtcaacagagtcatcatctac
caggagaaacaaggagaagaggaggatgcagatattattgtcaaaatctttgttgaattt
tccatggcgtcagagatgaacaaagctatccaggctctcaatgaccgctggtttggaggt
cgtaaagttgttgcagaagtgtatgaccaagatcgttttaacagcagtgacctttctgca
taa

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