Cololabis saira (Pacific saury): 133423337
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Entry
133423337 CDS
T09849
Name
(RefSeq) rho guanine nucleotide exchange factor 4-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133423337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133423337
Membrane trafficking [BR:
csai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133423337
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
133423337
NCBI-ProteinID:
XP_061569507
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All DBs
Position
22:complement(37089660..37132065)
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AA seq
894 aa
AA seq
DB search
MAQPKDLKVPDTSEDSSEPGLVWTGESGRRTRGIEQVPLPEVKVVPCSVPDGEGSVEVEN
VRNDFRTDEKIGYESWRSSGDTEDVHRTDVSPAELLDLQTNQDWDSETNFKGSWEERAKE
ARRFQSGPEGGHEDQILNLVPDGPPTPGSPVPPRTLTNRRGSESEGQRRRNTSISLLEDS
PGTRRSHQDLPSWSRPPPQTPEGPGGPLMGLGGPLVPLRPPRTRRPSSLRPEVQRRRVQS
GFQDSLRGGLWSPTPLDQGLTPPERPRTLKPPTSPLRFGSLDGSLDGSLDGPSQTGLYQS
GSELEMDVVPGSGLVQVSPGPFRTWSQSTPTGLDCLGWTGHARHSCCSVVVPDGSEKFSE
DLEDDLVYEEFRSGHRFPGGGGGEQLAVNELISDGGVVFAEALWDHVTMDVQELGFKAGA
VVEVVDATNKEWWWGRILEGEGWFPACFVRLRVNQDEPMDEYLAQLDQDQDQNQDQNRDQ
ARLGRLGPGLPCKEQMRANVLNEIMSTERDYIKHLKDICEGYIKQCRKRTDMFTEEQLRT
IFGNIEDIYRFQRKFLKVLEKKFSKEEPHRSEIGCCFLEHQTDFQIYSEYCNNHPNACVQ
LSKLMKVNKYVFFFEACRLLQRMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDY
KDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSIEDWEGEDVLSRSSELIFSGELTK
LSLHQSKSQQRMFFLFDHQMVYCKKDLLRRDMLYYKGRVDMDQVEVLDLEDGREKDFNIS
VKNGLKLRSLNNDDFLLCTKKPEQKQRWIRAFNDERRQVRQDRETGFSLTELQKQQALLN
ACKSHPAGKPKAVTRPYCDFLLRQKLHPSLNQQQLFLLAEPKRKTPFWTHLFRK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccgaaagatctgaaggtgccagacacctcagaagactcctcagaaccaggt
ctggtctggacgggtgaatccggacgtagaacccggggaatcgagcaagttccccttcca
gaagtgaaggtagtgccttgttcggttcctgatggagaaggttcggtggaggtggagaac
gtcaggaatgacttcagaacagacgagaagatcggatatgagtcctggaggagttctgga
gacacggaggacgtacaccggacagacgtgtcccccgctgagctgctagacctgcagacc
aaccaggactgggactctgagacgaactttaaaggatcctgggaagaacgagccaaggag
gccagaaggttccagtcgggtccagaagggggccatgaagaccagatcttgaatctggtc
ccggacgggccccccaccccaggatccccggtgccccccaggaccctgacgaaccgcaga
gggtcagagtccgagggccagcgacggaggaacacgtcgatctccctcctggaagactct
cccggtaccagacggagtcaccaggacctcccgtcctggtccagaccccccccacagacc
cccgagggcccgggggggcccctgatgggtctgggggggcccctggtacccctgaggccc
ccgaggacccgcaggcccagcagtctgaggccggaggtccagaggagacgggtccagtcc
gggttccaggactctctgaggggcggactgtggtccccgacccccctggaccaggggttg
acccccccggagagaccccggaccctgaaaccccccaccagccccctgaggttcgggtcc
ctggacggttctctggacggttctctggacggaccttcacaaaccggtctctaccagtcc
ggctctgaactggagatggacgtcgtacccgggtctggtctggtccaggtctctccagga
cccttcaggacctggtcccagagcaccccgacgggtctggactgtctgggctggacggga
catgcgagacactcctgctgctcggtggtggttcctgacggttctgagaagttctcggag
gacctggaggacgacctggtctacgaggagttccggtccggacatcggttcccgggaggc
ggcgggggggagcagctggccgtcaacgagctgatcagcgatggcggcgtggtcttcgcc
gaggccctgtgggaccacgtcaccatggacgtgcaggagttgggattcaaggccggggcc
gtggtggaggtggtggacgctacgaacaaggagtggtggtggggccggatcctggaggga
gagggctggttccccgcctgcttcgtccggctgcgcgtgaaccaggacgagcccatggac
gagtacctggcccagctggaccaggaccaggaccagaaccaggaccagaaccgggaccag
gcccgtctgggccggctgggacccgggttaccctgcaaggagcagatgagagcgaacgtc
ctgaacgagatcatgagcaccgagcgggattacatcaaacacctgaaggacatctgtgag
ggctacatcaagcagtgccggaagaggacggacatgttcacggaggagcagctcagaacc
atcttcgggaacatcgaggacatttaccgcttccagaggaagttcctgaaagttctggag
aagaagttcagcaaggaggagccgcaccggagtgagatcggctgctgtttcctggagcac
caaacggacttccagatctactcggagtactgcaacaaccaccccaacgcctgcgtgcag
ctctccaagctcatgaaggtcaacaagtacgtgttcttcttcgaggcgtgccggctgctg
cagaggatgatcgacatctctctggacggattcctgctcacccccgtccagaagatctgc
aagtatccgctgcagctggccgagctgctcaagtacaccaacccccaacatagggattat
aaagacgtggaagcggccttaaacgccatgaagaacgtagcgcggctgatcaacgagagg
aagagacggctggagaacatcgataagatcgcccagtggcagagctccatcgaggactgg
gagggggaagacgtcctcagcagaagctctgaactcatcttttcaggagagttgaccaag
ttgtccctccatcagtccaagagtcagcagaggatgttcttcctgttcgaccatcagatg
gtttactgcaagaaggacctcctgcggagggacatgctgtactacaagggccgggtggac
atggaccaggtggaggttctggacctggaggacggcagggagaaggacttcaacatctcg
gtgaagaacggcctgaagctccgctccctcaacaacgacgacttcctgctctgcaccaag
aaaccggagcagaagcagcgctggatccgggccttcaacgatgaacggaggcaggtccgg
caggaccgggagacaggcttctccctgacggagctgcagaagcagcaggccctgctgaac
gcctgcaagagccacccggccgggaaacccaaagcggtgacccggccctactgcgacttc
ctgctgcggcagaagctccacccctccctgaaccagcagcagctgttcctgctggccgag
cccaagaggaagacgcccttctggacacacctcttcaggaagtga
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