Cololabis saira (Pacific saury): 133423439
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Entry
133423439 CDS
T09849
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133423439 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133423439 (ube3c)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133423439 (ube3c)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
HECT type E3
133423439 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
133423439
NCBI-ProteinID:
XP_061569598
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All DBs
Position
22:20626473..20659495
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AA seq
1081 aa
AA seq
DB search
MFSFEGDFRRRPKVSLGGASKKEEKASLLHRTQEERQKREDERKRLKNAIIIQSYVRGYL
DLKRQYGIQRAQFDEWVSQTQGGGAQHVLDSAGLCLLSRQLIFFYRQNIDAHRLIWLCQN
LVKHNRQFVKLLVSPQKQTCIFQIKRILGFCCRLLQNCTDDSLNVAVPMRMLEIFSSERT
YLPVIPDAEYVASLLEQILHYMVQKGYYRSLYTLVNHRLPSSLEYSGSPSIPLASTLLEH
ILKPLHFTYSSCTTGARQFVFSAFTGEFISAPFTEQIFHFFIPALSDRHLLFPFEAFLSS
LQGTVGSSSSAHSQAPWLLYFVLSAGENCLGSLTEEGLLLYLRALQTLLPLLPVSESSSR
PEVTSDSEDDDDANVHPLPMQDDRRISVQLITEECVHKLDTKQQTNALLNLVWRDSASEE
VFTMMASICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPLLQ
LISRGSPMTFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHELEGQVQSSMMPFTLSEL
VTLSRCLRDACLGIIKLAYPETKTEHREEYMAAFLSVGVKTNSVIQQRIQAEQKRWVQLF
KVITNLVKMVKARDIRRPFCPAGHWLSQEVNIRADKVTQLYVPSARHAWRTRRMGRIGPL
QSTLDVGLEPPQLSVSEERNLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGPFPDG
INVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLK
SGFNPNQGFFKTTNEGLLYPSPTAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASF
FLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEGDVEELGLNFTIVNNDLGEAQVVEL
KLGGKDIPVTTANRIAYIHLVADYRLNKQIRSHCLAFRQGLANVVNLEWLRMFDQQEIQV
LISGAHVPILLDDLKNFTNYSGGYTASHPVITIFWEVVDGFTEEEKRKLLKFVTSCSRPP
LLGFKELHPAFCIHNGGSDLERLPTASTCMNLLKLPEFCDQHSMRNKLLYAIESSAGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgagggagattttagaagaagacccaaggtgtcactgggaggagcgagc
aaaaaggaagagaaagcatctttgttgcaccgtactcaagaagaaagacaaaaaagagag
gatgaaagaaagcgattgaagaatgccatcatcattcagtcctacgtacgtggctacctg
gacttgaaacgacagtatggtattcagagggcccagtttgatgagtgggtcagccagaca
cagggagggggagctcaacatgttctcgatagtgctggtctctgcctcttatcaagacaa
ctcatatttttctacagacagaatatagatgcacatagattgatatggctatgccagaat
ctggtgaaacacaaccgccagtttgtgaaactgttggtcagcccgcagaagcaaacctgt
atttttcaaatcaagaggattttaggcttctgctgcagacttctgcaaaactgcacagat
gatagtttaaacgttgcagttcccatgcgcatgttagaaatattttcttcagagagaacc
tatcttcctgttattccagatgctgaatatgtagcgtcattactcgagcagattttgcac
tatatggtacagaaaggttactacaggtcgctgtatactctcgtaaatcacaggctcccc
tccagtctggagtacagtggatctccctctatccctctggcaagcacattgttggagcac
atcctcaaacctctgcactttacttactcctcatgcacaacaggcgcaaggcagtttgtg
ttttcagcctttactggggagttcatctctgcgccatttaccgagcagatctttcacttc
tttatcccggcactctcggaccgccatctcttattcccatttgaggccttcctgagctct
ctccagggcacggttggctcttcatcatcagctcatagccaggcaccgtggctgctgtac
tttgtcctctctgcgggggagaactgcttaggatcactcacggaggagggtctgctgctt
tacctccgagctctgcaaacactgctgccactgctgccagtgtcagagagcagcagcagg
cctgaagttactagtgactccgaagatgacgatgatgctaacgtccacccattacccatg
caggatgacagacggatttctgtgcagctgataacagaagaatgtgtccacaagctggac
accaagcaacagaccaacgccctgctgaacctggtgtggagggattcagccagtgaggag
gttttcaccatgatggcttccatttgtcacacactcatggtgcaacatcgtctcatggtg
ccaaaagtcaggcttctgtacagtttagcttttaatgcacgtttcctgaggcacctatgg
cacctgataacttccatgacaactaaaatgatcacaggttccatggtgccgctgctacag
ctgatctcacgagggtctcccatgacatttgaggactcgaaccgcatcattcctcttttc
tatctcttcagctcgctctttagccactctctaatctccgtgcatgacagcgagtttttt
gggcacgaattggaaggacaggtgcaatcgtccatgatgcccttcacgctgtcagagctg
gtgactttgtctcgctgtttaagagatgcgtgtctaggaatcatcaagctggcctaccct
gagaccaaaacagaacaccgagaggaatacatggctgctttcctcagtgtgggtgtcaag
actaacagtgtgatccagcagcgcatccaggctgagcagaagcgctgggtgcagctcttc
aaggtcataaccaacttggtgaagatggtgaaagctcgtgacatcagacgacccttttgt
ccagcaggtcactggctttctcaggaggtcaacattcgagctgataaggtcactcagctg
tacgtcccatcggcgagacatgcctggagaacacggaggatgggccgtattggacctctt
cagtcaacacttgatgttggtttggagcctccacagctgtccgtgtctgaagagagaaat
ctggccatactcacagagctgccctttgttgtcccctttgaggagcgagtaaagatcttt
cagaggttaatctatgctgacaaacgagatgtgcagggagacgggcccttccctgatggc
atcaatgtcaccatcagacgcaactacatatatgaagacgcctacgataagctttctccg
gaaaacgaaccggacctaaagaaaaggattcgggtccatctgttgaacgctcatggtctg
gacgaggcaggcatcgatggtggtggcatatttcgcgagttcctaaacgagctcctcaag
tcgggctttaaccccaaccagggcttcttcaagacgaccaatgagggtttgctgtatccc
agcccgactgcagagatgctggtgggagactctttcaccagacactactactttctgggc
aggattcttggaaaggcgctgtatgagaacatgttggtggagctgccctttgccagtttc
ttcctgtccaaacttctgggaaccagtgcagatgtagacatccaccacttggcctctttg
gacccagaggtctatcgtaatcttctcttcctcaagagctatgaaggtgacgtggaagag
ctgggcctcaacttcaccatcgtcaacaatgatctcggagaagctcaggttgttgaactg
aagctgggaggcaaagatattcctgtgaccacagcaaaccggatagcttacatccatctg
gtggccgactacaggctaaacaagcagatcagatctcactgcctggccttcagacaaggt
ttggccaatgtggtcaaccttgagtggctgcgtatgtttgaccagcaggaaatccaggtg
ctgatatctggagctcatgtgccaattcttcttgacgacctgaaaaacttcactaattat
tcaggcggatacacagccagtcaccccgtcatcaccatcttctgggaagtggttgatgga
ttcacagaagaagaaaagcgtaagctgttaaagtttgtcaccagctgctcccgcccacca
ctgctgggctttaaggaacttcacccggccttctgcattcataacggcggttccgacctt
gagcgcctgcccaccgccagcacctgcatgaacctgctcaaactccccgaattctgcgac
cagcactcgatgaggaacaaactgctgtacgccatcgagtcctcggctgggtttgagctg
agttga
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