KEGG   Cololabis saira (Pacific saury): 133423502
Entry
133423502         CDS       T09849                                 
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:csai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    133423502 (shha)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:csai01002]
    133423502 (shha)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:csai00536]
    133423502 (shha)
Peptidases and inhibitors [BR:csai01002]
 Cysteine peptidases
  Family C46: hedgehog family
   133423502 (shha)
Glycosaminoglycan binding proteins [BR:csai00536]
 Heparan sulfate / Heparin
  Morphogens
   133423502 (shha)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Intein_splicing Vint DUF7764 Ribosomal_S6e Hint_2
Other DBs
NCBI-GeneID: 133423502
NCBI-ProteinID: XP_061569680
LinkDB
Position
22:complement(20464628..20472542)
AA seq 421 aa
MLLWTKMLLVGLICVSLVSSGMGCGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKAKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTQKAVRDLRPGDRVLAADDDGNPLYTDFLT
FIDRESNISRIFYVIETESGHRIRLTAAHLIFTADNSTEAQQQQRLRLRASAVFASKVLP
GQKVFVSEAERLVPATVTRIYTETHQGSYAPVTAQGSVVVDRVLASCYAVVENHQLAHCA
LAPLRLAHWVSSLLFTSPPPPAASSAHEDGVHWYSKVLYQLGTWLLDSHSIHPLGMSVYP
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgctgctctggaccaaaatgctgctggtcggtctcatctgcgtctccttggtgtcctct
gggatgggctgcggaccgggcaggggctacggcaggagaaaacaccccaagaagctgaca
cctcttgcctacaagcagttcatccccaacgtggcggagaagaccctcggggccagcggc
agatacgaaggcaagatcaccagaaactccgagcgatttaaagaactgactccaaattat
aacacagacatcatattcaaggatgaggagaacaccggcgcagacaggctaatgactcag
agatgcaaagacaagctgaactcgctggccatctcggtgatgaaccagtggcccggggtg
aagctgcgcgtcaccgagggctgggacgaggacggacaccacttcgaggagtccctgcac
tacgagggcagggccgtggacatcaccacctcagacagagacaaggccaagtacggcact
ctgtccaggctggcggtggaagccggattcgactgggtttactacgagtccaaggcccac
atccactgctccgtgaaagcagaaaactctgtggctgcgaagtcgggcggctgcttcccc
ggctcctccacggtgaccctgcaggacggcacccagaaggccgtcagggacctccggccc
ggggacagggtcctggcggcggacgacgacggaaacccgctctacaccgacttcctcacg
ttcatagaccgggaatccaacatcagcaggatcttctacgtgatcgagacggagtccggc
caccggatccgcctgaccgccgcgcacctcatcttcaccgccgacaacagcacggaggcg
cagcagcagcagcggctgcggctgcgcgcatcggcggtgttcgccagcaaagtcctgccg
ggacagaaggtgttcgtctccgaggccgagcggctcgtcccggccaccgtgacacggatt
tacaccgaaacgcaccagggctcgtacgcgcccgtgacggcgcagggcagcgtggtggtg
gaccgcgtcctcgcgtcctgctacgcggtggtggagaaccaccagctggcgcactgcgcc
ctggcaccgctcaggctcgcccattgggtgtcatccttgttgttcacgtcccctcctcct
cctgcagccagcagcgcacacgaggacggcgtgcactggtactccaaagtcctttatcaa
ctggggacgtggctcttggacagccactccatccatccacttgggatgtcggtttacccg
agttga

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