Cololabis saira (Pacific saury): 133423565
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Entry
133423565 CDS
T09849
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133423565 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133423565 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133423565 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
C2-set_3
C2-set_2
Ig_CD22
MG4
baeRF_family7
Motif
Other DBs
NCBI-GeneID:
133423565
NCBI-ProteinID:
XP_061569765
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All DBs
Position
22:complement(21713135..21758850)
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AA seq
1622 aa
AA seq
DB search
MSGTIPYYRKDQRHFDGGYRSTEAESKMSQYQSSSRYAASSSRYAASSSRYAAAASSRYA
GAASSASSSRYAAAAATSASSSSRGLKVSSHLGLEESRLSPTPKRAKPSYLALDKENQII
GYVVPIFRGSQEFATGLSDTEEARVKETAGYMARRNLFTSGLEMERSEVISRKEAMRESA
ERISLNKTIHEHGEHFKRMNEDSLMHAPEFVIKPRSHTVWEKQSVRLHCTVTGWPEPKVT
WYKNNVAINPLAHPGKYKLESRYSVHSLEIDRCDFDDTAQYHISAMNTQGEESAFASIVV
KRFKGEIDESLPTPRRAILEDGPVSEYGITFQTHIVDAFGVSFGREGETMSLGSTVIIYP
SLHRYQPEIQWYRDDVLLPPSKWTHMHWSGDRATLTLTHLNKEDEGLYTLRVTTKSGYET
YSAYVFVRDADAEVEGAPGAPLDVRCLDANKDYIIVTWKQPAIDGGNTILGYFVDRCEVG
TTHWHQCNDTPVKFARFPVTSLVEGRSYMFRVRAINKSGMSRPSRASEPVAAMDPADRAR
MRGTSAPWTGQIIVTEEEPAEGIVPGRPLELQVTEATKNYVVLSWNPPGEKGLEGVMYYV
EKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYSFRVRCCNSAGVGEPSDPTEATTVG
DKLDIPSAPGKIIPTRNTDTSVVVSWEASSHAKELIGYYIEGSIVGSNVWEPCNNKPVKG
TRFICHGLMTGDQYVFRVKAVNAAGISEFSQESEAIEVKAAIGGGIPHGVLPKMGPGASP
APPYGISVLECVRDAMVLAWKQPTFIGGADVTGYFVDYREVVDGVVGDWHEANIKSVSDR
AYRVSDLHENRKYQFQVRAANMAGVGIPSMPSNTFLCEEWTIAVPGPPHDLDIREVRSDS
LVLLWKPPVYQGRDPVNGFYIDIKEAEAPEEAWRGVNTKAEENKYLKIKHLKEGETYVFR
VRAQNKAGVGKTSEVTEPVQAMTKPGTKEIEVEVDDDGVVSLNFECSDITADSKFVWSKD
YVEMTESTRLTAETKGNKSKIAFSGLEEEDIGIYSCLVTHTDGASSSYNLSKEELKRLLE
ISHDHKFPIIPLKTELAVELMEKGKVRFWLQAEKISANGNVEYVFNDNLISQGEKYKMNF
DKNTGVIEMVMESLNPEDEGTFTFQLKDGKATNQSSLVLIGDVFKQLQKESEFQRKEWFR
KQGPHFIEYLGYEVTPECCVILNCKVGNIKKETSALWYKDGHEIKSDEHLTFTEGVLKLE
ISQISKKDAGVYEVVLKDDRGKDTSTLNLTDQGFKDLMNEVFSVIANSSTPLKITSTDEG
IRMYTFVNYYNDLLQVTWHYKESAISFSDRIKSGVVGDQLWLQITEPTEKDTGKYAIEFH
DGKAGLKRTVDLSGQAFDDAYAEFQRLKAAAHAERNRARVAGGLPDVVTIQEGKALNLTC
NISGDPVPEVTWLKNDREILSDDHCILKFESGKFASFTITAVNQSDSGKYSILVKNKYGT
ESGDFTVELTEGTPDLGVTSYMTDAEGNVVFSPNTPKEKMKTSITGTKAKKRKESVAQKP
PVEKAEDKEKSTSRKSEKEKTADVSTKEPKASESQHPEDAKENLAEKLPSAECPRGAKHS
HT
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaactataccgtactaccggaaggaccagcgccacttcgacggtggctaccgt
agcacggaggcagagtctaaaatgagccaataccagtccagcagcagatacgctgcttcc
agcagcagatatgcagcctccagcagcagatatgctgccgccgccagcagcagatatgct
ggcgccgccagcagcgcctccagcagcagatacgctgctgccgccgcgaccagcgcctcc
agcagcagcaggggactaaaagtgtcttcacatttggggctggaggaaagccgattaagc
cccacacccaagagagccaagccatcttacttggctttggacaaagagaaccaaatcatc
ggctacgtagtgcctatcttcagaggcagtcaagagtttgctacaggattgtcagataca
gaggaagccagggtgaaagaaacggctggatacatggcccgcaggaatttgttcaccagt
ggtctggagatggagaggtcagaggtgatctccaggaaggaggccatgcgggagtccgct
gagcgcatctctctgaacaaaacgatccatgaacacggcgaacacttcaagcgcatgaac
gaagacagcctgatgcacgccccggagtttgtgatcaaaccgcgctcccacactgtgtgg
gagaagcagtctgtgcggctgcactgcactgtgaccggctggcctgaaccaaaggtcacc
tggtacaaaaacaatgtggcaatcaaccctcttgcccaccctggcaagtataaacttgag
agcagatacagcgtgcactctctggagatcgacagatgtgattttgatgacacagcccag
tatcacatctctgccatgaacacccaaggagaagaatccgcatttgcttctatcgttgtc
aaaaggttcaagggtgaaattgatgagtctctgccaacccccagacgtgccattctggaa
gatggcccggtttctgagtatggcatcaccttccagactcatattgttgatgcgtttggt
gtatcatttggaagagagggcgagacaatgagtctcggttctacggttatcatctacccg
tccctgcaccgctaccagccggagatccagtggtacagagatgatgttctgttgcctcct
tccaaatggacccacatgcactggagtggagatcgagccacgctgacacttacacacctc
aacaaagaggatgagggcctctacaccctgcgggtcaccaccaagtctggatatgaaacc
tactcggcctacgtgtttgtgagagatgctgatgctgaggtggaaggagctcctggagct
cctctggatgtgcgttgcctggatgctaacaaagactacatcatcgtcacttggaagcaa
ccagctattgatggaggaaacacaattttgggctactttgtggacaggtgtgaggttgga
accacccactggcatcagtgcaatgacactccggtcaagttcgcccgtttcccagtcact
agtttggtggagggccgttcttacatgttccgggtccgagccatcaacaagagcggcatg
agccgcccgtccagagcgtctgagccggtggctgccatggacccagcggaccgcgcccgc
atgagaggcacatctgctccctggaccggacagattatcgtcacagaagaggagcctgcc
gagggcatcgtccctggcagacctctggagctgcaggtgactgaggcaaccaagaactat
gtggtcctgagctggaacccacccggagagaaaggccttgaaggcgtcatgtactatgtg
gaaaagtgcgtctccggcacagacagctggcagagagtgaacaccgagatcccggtaaag
tcccctcgcttcgcgctgttcgatctcgccgaggggaagtcctacagcttccgtgttcgc
tgctgcaactcagctggcgttggggagccgtctgatccaactgaagccaccacagtcggg
gacaagcttgatatcccatctgctccaggaaagattatccccactagaaacaccgacacg
tccgttgtggtgagctgggaagcatctagtcatgcaaaagagttgatcgggtactacatc
gagggcagtattgtcggcagcaacgtgtgggagccgtgcaacaacaagcctgtaaagggt
accaggttcatctgccacgggctgatgacgggagaccagtacgtgttcagggtgaaggcg
gtgaacgccgcaggcatcagcgagttctcccaggaatcggaggctatagaggtcaaggct
gccattgggggcggcatcccacacggtgtgttgccgaagatggggccgggggcctcgccc
gctccaccctatggcatcagtgttctggagtgcgtgcgcgacgccatggtgctggcctgg
aagcagccgaccttcatcggaggcgctgacgtcaccggctattttgtggactaccgcgag
gtcgtggatggcgtggtgggggattggcatgaggccaacatcaagtctgtcagcgatcgg
gcctacagggtgtctgacctgcacgagaacaggaagtaccagttccaggtgcgagcggcc
aacatggcgggtgttggcatcccgtctatgcccagtaacaccttcctgtgtgaagaatgg
accattgctgttccagggcctccgcatgacctggatatcagagaggtgcggagcgactcc
ctggtgctgctgtggaaacctccggtgtaccagggccgcgacccggtcaacgggttctac
atcgacatcaaggaggccgaggccccggaggaggcctggaggggggtcaacaccaaggcc
gaggagaacaagtacctcaagattaagcacctcaaagagggagagacctacgttttccgc
gtgcgtgctcagaataaagcgggcgtgggaaaaacctcagaagtcacagagccggtccag
gctatgaccaaaccaggcaccaaggagattgaggtggaagtcgatgatgatggtgttgtc
tccctgaactttgaatgcagtgacatcaccgccgactccaaattcgtgtggtctaaggat
tacgtagaaatgacagaatctacccgcttgaccgcagagaccaagggaaacaagtccaag
atcgctttcagcggtctggaggaggaggacataggcatttactcgtgtcttgtcacccac
actgatggtgcttcatccagctacaatctctctaaagaggagttgaagaggctgctggag
atcagtcatgaccacaaattcccaattatccccctgaagacagagctggctgtagagctg
atggagaagggcaaagtccgcttttggctgcaggccgaaaagatatcggcgaatggcaat
gtcgaatatgtttttaacgacaatctgatttctcaaggagagaaatacaagatgaacttt
gacaagaacactggtgtgattgagatggtcatggagtccttgaaccctgaagacgagggc
accttcaccttccagctgaaggacggcaaagctacaaaccagtccagcttggttctgatt
ggagacgttttcaagcagctgcagaaagaatctgagttccagagaaaagaatggttcaga
aagcaaggtcctcactttattgagtatttgggttacgaagtgacaccggagtgttgcgtc
atactcaactgcaaggtcggtaatataaagaaggagacttcagctctgtggtacaaagac
ggacatgagatcaaatcagacgagcatctcaccttcaccgagggggttctgaagctggag
atttctcagatctccaagaaggatgctggggtgtatgaggttgtcctgaaggatgacaga
ggaaaggacacgtccacactcaatctgacagatcagggcttcaaagacttgatgaatgaa
gttttcagtgttatcgccaattcctccactccactaaagatcacaagcacagatgagggc
atccgaatgtacacctttgtcaactactataacgatttactccaggtcacgtggcattac
aaggaatcggcgatctccttctccgaccgtataaagagcggtgtggtcggagaccagctg
tggctccagatcacagagcccacagagaaagacacgggcaagtacgccatcgagttccac
gatgggaaggctggcctcaagaggaccgtggacctctccggtcaagcatttgatgatgct
tatgcagaattccagagactcaaagctgctgctcatgcagagagaaatcgtgctcgagta
gcaggaggcctgcctgatgtggtcactatacaggagggcaaggctctcaatctcacctgc
aacatttcgggcgatcccgtgccggaggtcacctggctgaagaacgacagggagatcttg
tccgacgatcactgcatcctcaagtttgagtcgggcaagttcgccagcttcaccatcacc
gccgtgaaccagtcggactctggcaagtacagcatcctggtgaagaacaagtacggcacg
gagagcggagacttcaccgtcgaactaaccgaggggaccccggacctgggggtgacctcc
tacatgaccgacgcagaaggaaatgtggtgtttagcccaaacaccccaaaggaaaagatg
aaaacctcaataactggaacaaaagcgaaaaaaagaaaggaatctgtcgctcagaaacct
cctgtagaaaaagcagaagacaaagaaaaaagcaccagcaggaagtcagagaaggaaaaa
actgcagatgtttccacaaaagaaccaaaagcctctgagtcacaacatccagaagatgca
aaagaaaatttggctgagaagctaccgagtgctgaatgcccccgaggagccaagcatagc
cacacctga
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integrated database retrieval system
