Cololabis saira (Pacific saury): 133423642
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Entry
133423642 CDS
T09849
Name
(RefSeq) cadherin-12-like isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133423642
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133423642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Stevor
RET_CLD1
Fibulin_C
DUF443
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
133423642
NCBI-ProteinID:
XP_061569890
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Position
22:27494158..27643624
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AA seq
803 aa
AA seq
DB search
MPTRNCLLLFLWILADEGSVSSLRPPSSLLGRSRTAREHGRGSLGSMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGDSLVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDMNTNIPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTLVNITLSDVNDNPPRFSKSFFHLRVPESSAVGSAVGRIKADD
LDKGRNAEVEYTIVPGDGGAMFDITTNEHNQEGIIILKKPLDYETKKAYTFKVDASNAHV
DPRFQGFGGFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRESIAQHNISIVATKLNSPVLTSRVAV
TVHVLDINEFPPELASPYETFVCENAKMGQVIQTFSAKDQDLPSAGQQFSFRTSKEDMKN
KNFTIRDFGNNTAGIVTKRIGFRRRLQEIYFLPVVIEDNGYPPKSSTGTLTIRVCGCASD
GSLLTCSAEAIFLPVGLSTGALIAILLCIIILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLYRRDVKPEMNRGPKPPVSQGSEDIRDF
IDQRLQENDMDNSAPPYDSLATYAYEGDGSVAESLSSIESLTIDFEEDYDYLSDWGPRFK
TLAGIFGEQSETQSDSTNTENAH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaaggaactgcctgctgctgttcctgtggattcttgccgacgagggttcggtc
tcttctttgcgtccaccttcatcgctgctgggacggagcaggacggcgcgggagcacggc
aggggctcgctgggctcgatgaggaatggggcggcggggtttcagcgggtcaagagaggc
tgggtgtggaaccagttctttgtactggaggagtacatgggctcagacccgcagtatgtg
ggcaagctccacactgacctcgataagggggacagtttggtgaagtacaccctctccggg
gatggggctggctccattttcacaattgaccaaacaacaggggacatccatgccttaagg
agccttgacagagaggagaagccttactataccctccgcgcccaggctgtggacatgaac
accaatatccccctggagcctgaatctgaatttgttatcaaggttcaagatatcaatgac
aacgagccaaagttcctagagggaccgtacacagccagtgttcctgagatgtctccagtg
gggacatacgtgacgcaggtaacagcgactgatgcagatgaccccacctatggaaacagc
gccagagtggtgtatagtattctccatggccaaccttacttctccgtcgaccccaaaaca
ggggttataaagacagccttgcccaatatggacagagaggtgaaggaacaataccaggta
ttaatccaggccaaggacatggggggccagctgggaggactggccgggaccacacttgtc
aacatcaccctcagcgatgtcaacgataacccgcctagattctctaagagtttcttccac
ctaagagttcctgaatcttctgctgtgggctctgctgttggcagaatcaaagctgatgac
ctggacaaagggagaaacgctgaagtggagtacaccattgtgcccggtgatggaggtgcc
atgtttgatatcaccaccaatgagcacaaccaggaggggatcatcattctcaagaagccg
ctggactatgaaaccaagaaggcatacacctttaaggtagacgcctccaatgctcatgtg
gatccacgatttcagggctttgggggcttcaaagacacagcaacagtgaagattaacgtt
ctggatgtggatgagcccccggtgttcaataagccctcctatgtgatggatgtgtacgag
gacacacctgcgggcaccatcatcggtgcggtgacggcgcaggatttagatgccagcagc
agcccagtcaggtattccattgactggaaaagtgacttggacagctactttgacatcgat
ccggtggaaggaacgatctcaacaaacgagctgcttgacagggagagcattgcccagcac
aacatctccatcgtggcaaccaaactcaacagcccagtcctgaccagccgggtggccgtc
accgtccatgtgctggacatcaacgagttcccccccgaactggccagtccctatgagacc
tttgtgtgtgaaaatgcaaaaatgggacaggtgattcagaccttcagtgcaaaggaccag
gacttgccaagtgctggacaacagttctccttcagaacatcgaaggaagatatgaagaat
aagaatttcacaatccgagactttggaaacaacacggctgggattgtgacgaaacggatt
ggcttcagacgacgtttgcaggagatctacttccttcctgttgtgatagaagacaacggc
tacccacccaagagcagcactggcaccctgaccatccgtgtatgtggctgtgcatcagat
ggctccctgctaacatgcagtgcagaggccatctttcttcccgtgggtcttagcacggga
gccttgattgccatactcctgtgtatcatcatattattagttattgtggtcctctatgtg
ggcctgagacgacagaagaaaaaggagaccctcatgtcatccaaggaggatatccgagac
aatgtgatccactatgatgatgaaggaggaggagaggaggacacacatgcgtttgacatg
gggacgctccgcaatcctaaggttgtcaaggagaacctgtaccgcagggatgtcaaacca
gagatgaatagaggccccaagccacctgtctctcaggggagtgaagatatccgggacttc
atcgaccagcgactgcaggagaatgacatggacaactcggcgccgccctacgactccttg
gccacatatgcttacgagggagacggctcagtggccgagtctctcagctccatcgagtcc
ctcacaatagacttcgaggaggactacgattacctcagtgactgggggccccgctttaag
acgctggcagggatatttggggaacagtcagaaacccagtcggactcaacaaacacagag
aacgcacattga
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