Cololabis saira (Pacific saury): 133423660
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Entry
133423660 CDS
T09849
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133423660 (dcaf11)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133423660 (dcaf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
133423660
NCBI-ProteinID:
XP_061569918
LinkDB
All DBs
Position
22:11457807..11479074
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AA seq
564 aa
AA seq
DB search
MGSQSSSGMSGGRGSSSGSPAEPSGAAAPSQSQGQSQSQSQSSSSSSSGSSGGRGRRTAD
RQPASEEDVDLAEVLAYLLRRGQVRLVHGSRATELELVQSYSDSDEDSDGALEGRLGDRY
NPPVDTQPDTNELDRSEIRTQILLATASSSMRGRHSFTHMLSEREQGRCRGSSFSHGECS
RIRTHFLPNYVSHKDSYQQKAFCGVYCEDGSMFLSACQDQNIRLYDTTRGRFHLRRTVKA
RDVGWSVLDVCFTPDAQHVLYSSWSDYIHLCSIDGDSENHTALDLNPDERRFCVFSLAAS
TDGKEILGGANDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADNSSQLLFSGSDDALCKV
WDRRTLREDRPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLA
ASRLAVTQQNWDYRWQQVPQRALKRHRLTGDTSVMSYRGHGVLHTLIRCRFSPEFSTGQR
FIYSGCSTGKIIIYDVLTGAVVTRLSGHHACVRDVSWHPYEDNIISSSWDGAVRMWEHRQ
THPLEEEREREKDGELQQETKERC
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgcagtccagttctgggatgtctggtgggagaggctcttccagtggcagcccg
gcagagccgtctggagccgcggccccgagccagagccagggccagagccagagccagagc
cagagcagcagcagcagcagcagcggcagcagcgggggccggggccgccgcaccgcggac
cgccagcccgcttcagaggaggacgtggacctggctgaagtgctggcttatctactcagg
aggggccaggtgagactggtccatggcagcagagccacagagctggagctcgtccagtca
tattccgactctgacgaggacagcgatggagccttggaggggcggctcggggaccgctac
aatccaccagtggacacccagcctgacacaaatgagttggaccgcagtgagatccgcact
cagatcctgctggccaccgcctcgtcttccatgagaggccgccacagtttcacccacatg
ctgtcagagagggaacaaggcagatgtcgaggctccagtttttcccatggagaatgcagc
cgcatccgcacacatttcctgccaaactatgtgtcccacaaggattcgtaccagcagaaa
gccttttgcggagtttactgtgaggatggcagcatgttcctgtctgcctgccaagaccag
aacattcgcctgtatgacaccaccagagggcgtttccacctacggcggacggtgaaggcc
cgtgacgtgggctggagcgtgctggacgtttgcttcactcccgacgcccagcacgtgctc
tactccagctggtctgactacattcatttgtgcagtatagatggagacagtgaaaaccac
accgccttggacctcaatccagatgagaggaggttctgtgtgttctcactggctgcatca
acagatgggaaagagatcctgggcggagcaaacgatggctgcctgtacgtctttgatctg
gagcagaacaagcgaacgttgaagatcgatgcccacgaagacgacgtgaacgcggtggcg
ttcgccgacaactcgtcccagctgctcttctccggcagcgacgatgccctgtgcaaggtc
tgggacagacggacgctgcgggaggacagaccgcagcctgtcggacagctggccggccac
cgagacggcatcactttcatccacagcaagggagatgcccgctatctaatcagcaactcc
aaggaccagtccatcaagctgtgggatgtcaggaagttctcgcctaaagagggattggct
gcctcccgcctggctgtcacccagcaaaactgggattaccgctggcagcaggttccccag
agagccctaaaaagacacaggctgacgggcgacacgtcagtgatgtcctaccgcggtcac
ggcgttctgcatacgctcatccgctgccgcttctctccagaattcagcaccgggcagagg
ttcatctattccggttgctccaccggcaaaatcatcatctacgacgtgctgaccggcgcg
gtggtcaccagactgtcgggccatcacgcctgcgtgagggacgtgagctggcacccgtac
gaggacaacatcatcagcagctcgtgggacggagcggtgcgaatgtgggagcacagacaa
acccatcctctagaagaggagcgagagcgggagaaagacggagaactgcagcaagagacg
aaagaaagatgctga
DBGET
integrated database retrieval system
