Entry |
|
Symbol |
nup58
|
Name |
(RefSeq) nucleoporin p58/p45 isoform X1
|
KO |
|
Organism |
csai Cololabis saira (Pacific saury)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csai00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133423735 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csai03019]
133423735 (nup58)
Messenger RNA biogenesis [BR:csai03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133423735 (nup58)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
22:complement(13059214..13070761)
|
AA seq |
574 aa
MSGFNFVSGTLGATNAGGGFPFGAAASAPAASTGGISFGTALAAAAATPAAAATGTAAPS
LGLGGSLFSQKPTGGFSFNTPASSGAVAPTTGLTLGAPAAPAASTATTGFSLAFNKPIAS
ATPFSLTTTTASLTPAAGLSFGSVLTSTAPQQPAATGFALGLGGTTTTASVASVPSLGAG
LFSSSGATGLGQTTLGGGSALTLGSLLSSSTAVSAAPAPSVGLGGVDFSTSSENKSDASG
ANAQDSKALKDENLPPVICQDVENFQKFVKEQKQVQEDISRMSSKAISKVQDDIKSLKQL
LSVSASGLQRQALAIDKLKLETAQELKNSDIALRTQKTPPGLQHENTAPSDYFHGLVEQF
EVQLQQYRQQIEELENHLTTQSSGSHITPQDLTLAMQKLYHTFVAQAAQLQSIHENVKIL
KHQYLSYRRAFLEDSTDVFESKRASNRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLTQQ
QQPTPGFGAGPGFGGMGTGGSTFGFSTTGKPTGGSLSAGFGGSSSSGFNFSNPGINPSAG
LTFGVSNQPGAAFATGTPLLQLKKPPAGNKRGKR |
NT seq |
1725 nt +upstreamnt +downstreamnt
atgtctggcttcaacttcgtatcggggactcttggcgccaccaatgcgggtggaggattc
ccgtttggggcggcagccagtgctcctgcggccagtactggtggcatttcttttgggact
gctctggcagcagcagctgcgacgcctgccgccgccgccactggcaccgccgccccatct
cttggtcttggaggcagcctctttagtcagaaacccactggaggattctctttcaacacg
cctgcctcaagtggtgctgtagcacccactacaggtcttacactgggtgccccagctgcc
ccagctgcgtccactgctaccactggctttagtttggctttcaacaagcccatcgcctct
gccacacctttctccctcaccacaactactgcgtccttaacacctgcggctggtttaagt
tttggctctgtcctgacatccacagccccacagcaacctgccgccacaggctttgctctt
ggccttggtggcacgacaactactgcatcagtcgcgtcagtgccatcgctgggtgcaggt
ctgttctccagctctggggccacaggtttgggtcaaactactcttggaggaggaagtgcg
ttaacattggggtctttgctgtctagctccacagctgtatcagctgctcctgccccaagt
gttggcctgggtggagtcgactttagcacatcctctgagaataagagtgacgcatctggc
gccaatgcacaggacagtaaagctttgaaagatgagaatcttcccccagttatctgtcaa
gatgttgaaaactttcaaaaatttgtgaaggagcagaagcaggttcaggaggacatcagc
aggatgtcatcaaaggccatttctaaagtccaagatgacatcaaaagcctcaaacaactt
ctttctgtcagtgccagtggtctgcagcgccaagctcttgccattgacaaactaaagttg
gaaacagcacaggagctgaaaaattctgacatagcgctgcgtacccaaaagacaccacct
ggacttcagcacgaaaacactgctccatcagattatttccatggcctggtggaacagttt
gaagtacagttgcaacagtaccggcagcagatagaagagctagagaaccatctgacaacg
cagagcagtggctctcacatcacccctcaggatctgactttggccatgcagaaattgtac
cacacgtttgttgcacaggctgcccagcttcagtctatccatgagaatgttaagattttg
aagcaccagtacctctcctaccgcagagccttcctggaagactctacagatgtcttcgag
tccaaacgggcatctaacaggaaatggcagagtgcgccacgagtcacaactgggcctgcc
ccattctccagtgttcccaatgctgcagctgttgccatggcagccacactgacccagcaa
cagcagccaactccaggtttcggtgctgggccagggtttggtgggatggggactgggggg
tctacgtttggcttctccaccaccggtaagcccacgggaggcagtctgagtgcaggtttt
ggtggtagcagtagttcaggcttcaacttcagcaatcctggcatcaacccgtctgctggc
ctgacctttggcgtgtctaaccaacctggggcagcctttgccacaggaaccccacttctg
caactgaagaaaccccctgctggtaacaagagaggcaagagatag |