Cololabis saira (Pacific saury): 133423735
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Entry
133423735 CDS
T09849
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133423735 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133423735 (nup58)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133423735 (nup58)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Siah-Interact_N
PSY3
Nup49_C
Motif
Other DBs
NCBI-GeneID:
133423735
NCBI-ProteinID:
XP_061570032
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Position
22:complement(13059214..13070761)
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AA seq
574 aa
AA seq
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MSGFNFVSGTLGATNAGGGFPFGAAASAPAASTGGISFGTALAAAAATPAAAATGTAAPS
LGLGGSLFSQKPTGGFSFNTPASSGAVAPTTGLTLGAPAAPAASTATTGFSLAFNKPIAS
ATPFSLTTTTASLTPAAGLSFGSVLTSTAPQQPAATGFALGLGGTTTTASVASVPSLGAG
LFSSSGATGLGQTTLGGGSALTLGSLLSSSTAVSAAPAPSVGLGGVDFSTSSENKSDASG
ANAQDSKALKDENLPPVICQDVENFQKFVKEQKQVQEDISRMSSKAISKVQDDIKSLKQL
LSVSASGLQRQALAIDKLKLETAQELKNSDIALRTQKTPPGLQHENTAPSDYFHGLVEQF
EVQLQQYRQQIEELENHLTTQSSGSHITPQDLTLAMQKLYHTFVAQAAQLQSIHENVKIL
KHQYLSYRRAFLEDSTDVFESKRASNRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLTQQ
QQPTPGFGAGPGFGGMGTGGSTFGFSTTGKPTGGSLSAGFGGSSSSGFNFSNPGINPSAG
LTFGVSNQPGAAFATGTPLLQLKKPPAGNKRGKR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttcaacttcgtatcggggactcttggcgccaccaatgcgggtggaggattc
ccgtttggggcggcagccagtgctcctgcggccagtactggtggcatttcttttgggact
gctctggcagcagcagctgcgacgcctgccgccgccgccactggcaccgccgccccatct
cttggtcttggaggcagcctctttagtcagaaacccactggaggattctctttcaacacg
cctgcctcaagtggtgctgtagcacccactacaggtcttacactgggtgccccagctgcc
ccagctgcgtccactgctaccactggctttagtttggctttcaacaagcccatcgcctct
gccacacctttctccctcaccacaactactgcgtccttaacacctgcggctggtttaagt
tttggctctgtcctgacatccacagccccacagcaacctgccgccacaggctttgctctt
ggccttggtggcacgacaactactgcatcagtcgcgtcagtgccatcgctgggtgcaggt
ctgttctccagctctggggccacaggtttgggtcaaactactcttggaggaggaagtgcg
ttaacattggggtctttgctgtctagctccacagctgtatcagctgctcctgccccaagt
gttggcctgggtggagtcgactttagcacatcctctgagaataagagtgacgcatctggc
gccaatgcacaggacagtaaagctttgaaagatgagaatcttcccccagttatctgtcaa
gatgttgaaaactttcaaaaatttgtgaaggagcagaagcaggttcaggaggacatcagc
aggatgtcatcaaaggccatttctaaagtccaagatgacatcaaaagcctcaaacaactt
ctttctgtcagtgccagtggtctgcagcgccaagctcttgccattgacaaactaaagttg
gaaacagcacaggagctgaaaaattctgacatagcgctgcgtacccaaaagacaccacct
ggacttcagcacgaaaacactgctccatcagattatttccatggcctggtggaacagttt
gaagtacagttgcaacagtaccggcagcagatagaagagctagagaaccatctgacaacg
cagagcagtggctctcacatcacccctcaggatctgactttggccatgcagaaattgtac
cacacgtttgttgcacaggctgcccagcttcagtctatccatgagaatgttaagattttg
aagcaccagtacctctcctaccgcagagccttcctggaagactctacagatgtcttcgag
tccaaacgggcatctaacaggaaatggcagagtgcgccacgagtcacaactgggcctgcc
ccattctccagtgttcccaatgctgcagctgttgccatggcagccacactgacccagcaa
cagcagccaactccaggtttcggtgctgggccagggtttggtgggatggggactgggggg
tctacgtttggcttctccaccaccggtaagcccacgggaggcagtctgagtgcaggtttt
ggtggtagcagtagttcaggcttcaacttcagcaatcctggcatcaacccgtctgctggc
ctgacctttggcgtgtctaaccaacctggggcagcctttgccacaggaaccccacttctg
caactgaagaaaccccctgctggtaacaagagaggcaagagatag
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