Cololabis saira (Pacific saury): 133423742
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Entry
133423742 CDS
T09849
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133423742 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133423742 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133423742 (pcdh7a)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133423742 (pcdh7a)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Protocadherins
133423742 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
133423742
NCBI-ProteinID:
XP_061570052
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All DBs
Position
1:complement(16538811..16592174)
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AA seq
1372 aa
AA seq
DB search
MQRLGAVHSSAAQHLSLVVMLQLLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLTA
GTGSGDVTFALESGSEFFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGKNGI
DRYELIQDNGAGSSSTRRAAGGNPITRADGLDRRGRSGDNAGGARSTVFELQVADIPDGE
KQPQLIVKGTLDRELKDSYELILKVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYEA
EMTENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRIDR
EEVAQLRFTVMARDRGQPPRTDRTTVVLAVRDENDNVPVVDIRKIGRILVRDGAALVPEN
VLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADDAFDRNKKKYF
LHTSALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHFAE
NNSPGERVVTVVATDADSGKNAEMVYSLDPASGPFYIDADNGDIRATGVLDREQRERYEL
RVIAKDKGTPPLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTDAD
EGENAELSLFVEMDGADAKKEKVEGEDGEKEQEDMFSIENNTGTIFSSASFDREKLSTYT
FRVRAVDGGEPRKTATATVSLFVTDENDNAPSITAPSNESYTLLPPASSARTIVRTVTAT
DSDAGLNADLRYALVGGNPYRLFEIGHTNGVITLAEPLERRHRGLHRLVVRVNDSGIPSL
CATALVHVFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIGVLAG
AAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPSGAQPQAPRSGGSDRGRKPRR
DKRGGGSGSTAGGGGGKSDRSLYSGIVTVNGLRRHANDDDEEDLSSASERLAARYCAMDS
DPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQELPPSNTFVG
SGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYNKQGTLRRVTFSVVTQPQ
DGGCYDSGMEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQLPDV
ALTGKCTRECDEFGHSDTCWMPVRASPRQRQRHGSDPPRLSTFAPGDDNNNLRGNNHESD
SESAGSGGSSEPGMVVVGGEGQRLPLANGDPLGTLGRGDRNRNMGDHNRNLLNRKMTSAS
YDTFSSAGFARRQPDEEGGEGQKPAEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggtgcagtgcactcctccgcggcgcagcatctcagcctcgtggtgatg
ctgcagctgctgctgactcagctgccgggtgcagactcagctctccggtaccgggtggca
gaagagggcccgccggacgtcaagatcggcaacgtggccgcagacctgggcctcacggcc
ggcacggggagcggggacgtcacctttgccttggagagtggctcagagttcttcaagatt
gacaatgtgacaggtgagctgacaacaggcccgcggcgcatagacagagagaagctcccc
cagtgccagatgatctttgatgaaaatgagtgtttcttggactttgaggtgtcagtgatc
ggcccactgcagagctgggtggacctgtttgaaggacgggttgtcataacagatatcaat
gacaacactccttcattcccctcacctgtgctgcagctctcagttgaggagaatcgccca
ataggaaccctgtacctgcttcccactgcaacagacagagattttgggaaaaatggcatt
gaccgttatgagctcatccaagataatggagcggggtcaagttcaacgaggcgcgcagca
ggaggaaaccccattactagagcggatggacttgaccggaggggtagaagtggagataac
gcaggaggtgcaaggagcactgtttttgaactgcaagtagcagacataccagatggtgag
aaacagccacagctcattgtgaaaggcacactggaccgtgagctaaaagactcctatgag
ctcatcctcaaggttcgagatggtgggaacccaccacgttcctcccaagccctgcttcgt
gtttctatcactgatgtgaacgacaacagcccgcagtttgagaggtctacctacgaggct
gaaatgacagagaacgccccaccgggtacacctgtcctccaggtcagagcttcagatcgt
gacatcggagtcaacgggcaggtggagtacgtctttggagccgccactgaatctgtgaga
cgactcctgcggctagatgaggcgaccggatggttgagtgttctccaccggattgacagg
gaggaggtggcccaactgaggttcaccgtaatggccagggacagaggtcagcctccccgc
accgaccgcacaacagtagtgttggctgtccgagatgaaaacgacaacgtcccagttgta
gatatcagaaagattggccggatcctcgttcgggatggagcagccttagtgccggagaac
gttctggtggacactccagtagctctggttcaggtgtcagaccgagaccaaggagagaac
ggggctgtgacctgtacagttgtaggagatgttccttttacgctgaagccagctggggaa
acagcactcccacccctacctgcagatgacgcttttgacaggaataagaaaaaatacttc
ttacatacttctgccttgctggactacgaggccacaaaagagtacagcgtaacaatcgtg
gcagtagattccggcagccccagtctgtccagtaacagctcactgatggtgcgagtggta
gacatcaatgaccatgccccgactttcgctcagagcgtcgtggaggtccactttgctgag
aacaactcacctggggaaagggtggtcacggttgtagccacagatgcagacagtggcaag
aatgctgaaatggtgtattccttggatcctgcttctggacctttctacatagatgcggac
aatggagatatccgtgccaccggggttctggaccgcgaacagcgagagagatacgaactg
cgagttattgcaaaggacaaaggcacccctccgttgcaaggctctgcgactgtcgttgtt
caagtgaccgatcgcaatgacaacgcaccaaagtttgttcaagaaatctttacattctat
gtcaaggagaacctgctagccaacagtccagttggcatggtcaccgtgaccgacgctgat
gaaggtgagaatgcggaactgagcctgtttgtagagatggatggagccgatgcgaagaaa
gagaaggtggagggagaagatggtgagaaggagcaagaagatatgttttccattgagaac
aacacaggaaccatcttctcttctgcatcgtttgaccgtgaaaagctttccacctacacc
ttccgtgtccgagcagtagacggaggggagccccgcaaaacagccactgctacagtttca
ctgttcgtgacggacgaaaatgacaacgccccctcaatcaccgctccatccaatgaatcc
tataccctccttccaccggccagcagtgcccgcaccattgtcagaaccgtaacagcgaca
gactcagacgcgggcctaaatgctgacctccgctatgctcttgtggggggaaatccctac
agactctttgagattggccacacaaatggagtgatcaccctggcagagcccttggagcgg
cgccacagaggtctgcatcgcctggtggttcgagtcaacgacagtggcatcccgtctctc
tgtgccacggcattggttcatgtcttcatcaatgagagcttggccaacgcgaccctggtg
gatgcacaggtggcacgaagcctgatggccccactgtcgctagatatcgcaggagaccca
gacagcgagcgtgctctgggaaaacagcgtctcagcgtagccatcggcgtcctggcggga
gctgcagcggtgatcctggttattctgctcgtggtcacagctcggcagtgtggcgctcag
ggaaagaatggttacgaagccggtaagaaggagccagaggaagacttcttcagtccctcg
ggggctcaacctcaagccccacgaagtgggggatcagaccgtggacgtaaacctcggcgg
gacaaacgcggtggtggcagcggcagcacggccggaggaggaggagggaagtcagacaga
tctctttacagtggtattgtcacagtcaacggcctgcgtcgccacgccaacgacgatgat
gaggaggatttgagcagtgccagtgagcgcctggcagcacggtactgtgctatggacagt
gaccctggcagcccacggatgggcggcggcaggagacaccagtccagtccagatctggcc
aggcactacaaatccagctcgcctctccctgcggtgaatctacagccccattcgccccca
gcagagggaaagaagcaccaggcggtccaggagctgccaccctccaacacctttgtgggc
agtggtggatgtgtggggagcgctggctccagcagcagcagtagcgggggcagtgggaac
gccgacgccatgtccctggggtctgaccagtgctcagagtacggctgccagactgggaac
aagtacaacaaacaggggacacttcgccgggtgactttctcggttgtgacccaaccccag
gacggcggttgctatgacagcggcatggaggattcagagacgccgagcagcaagagttca
tcagggccgcggctgggagccctgccgcttcccgaggaaggctatgagcgaaccacaccg
gagggcagcgtgggcgaagaggagcacgtagagaacgatgccagacagctgccagacgtg
gctctgacaggaaagtgcaccagggagtgtgatgagtttggccactccgacacgtgttgg
atgcccgtccgcgcctcgccgcggcaacgccagcgccatggcagcgaccccccaagactg
tcgaccttcgccccgggagacgacaacaacaatctccgcggcaacaaccacgagagcgac
agcgagagcgccggcagcggggggagctcggagcccgggatggtggtggtcggcggagaa
ggccagaggttaccgctagccaacggggatccactcggcaccctgggtcgcggagaccgc
aacaggaacatgggggaccacaaccgcaaccttctcaaccgcaagatgacgtccgcgtcc
tatgacacgtttagcagcgcgggcttcgccaggcgccagccggacgaggagggaggcgag
ggccagaaaccggccgaggtcataccgctgacgcggactggaggggactacaagacaact
tcctgcctcacgttgtcgcggcgtgaggtttacctgtga
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