Cololabis saira (Pacific saury): 133423932
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Entry
133423932 CDS
T09849
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133423932 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133423932 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133423932 (tnpo3)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
133423932 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
133423932
NCBI-ProteinID:
XP_061570249
LinkDB
All DBs
Position
23:8351401..8378066
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AA seq
936 aa
AA seq
DB search
MEGGKPSLALVFQAVQALYNDPDPAGKERASLWLGELQRSMYAWEISDQLLQLRQDVESC
YFAAQTMKMKIQLSFFELPAETHNALRDSLLIHIQNLKDLSPIIVTQLALAIADLALQMS
SWKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAFCSNTV
VTLLTTCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSSFMANNQIIMVLFQVLQRDETSTN
LHEAASDCVCSALYAIENVETNMALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLESTVRTPGQGLGDLRTLELLLICAGNPQYEVVEISFNFWYRLGEHLYKINDPA
LHSIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWEVTEAVLFIMASIAKSVDPENNPTLTEVLQQVVLLPENVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLSYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLEIARSLDSFALSSDAAVGLLKGTALVLTRLPLEKIAVCLSDLCAVQVIALKKLLTEDS
TNGKSADPTVWLDRLAVIFRWVSDPQVERADRRHTNPIVENGQSHPCQKVIQEIWPVLSE
TLNTHQADNRIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSIL
VDEYGMEEGCRQGLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTL
LSSSIIVHIIQCAIAATGLDHRDANCSVMKFVRDLIHTGVANDHEEDFEVRKRLISQAME
QHGQQLVNQLLHSCCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKSLPKETSSGA
VTVTHKQLTDFHRQVTSAEECKQVCWAIREFTRLFR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggaaaaccgagcctggcgctggtgttccaggcggtccaagccctgtacaac
gacccggacccggccgggaaggagcgagcctcgctgtggctcggggagctgcagagatcg
atgtacgcctgggagatctcggaccagctgctgcagctccggcaggacgtggagtcgtgt
tatttcgccgcccagacgatgaagatgaagatccagctgtccttcttcgagcttccggca
gagacccacaatgcactgcgagactccctgctgattcacatccagaaccttaaagacctg
tccccgattatcgtcacccagctggcgctggcgatcgccgacctggcgctgcagatgtcg
tcctggaagggatgcgttcacacgctcatagaaaagtacaacaacgacatcagctccatg
cccttcctcatagagatcctgacggtgctgccggaggaagtgcacagccgctcgctacgg
atcggagccaaccgccggacggagatcatcgaggatctggcgttctgctccaacaccgtc
gtcacgctgctgacgacgtgcgtggagaagacggggaacgatgagaagatgctcatcaag
gtgttccggtgtctgggcagctggttcaacctgggcgtcctggacagcagcttcatggcc
aacaaccagatcatcatggtcctcttccaagtgctgcaacgggacgagacgtccaccaac
ctgcacgaggcggcgtcggactgcgtgtgctcggcgctctacgccatcgagaacgtggag
accaacatggcgctggccctgcagctgttccagggcgtgctgacgctggagacggcgtac
cacatggccgtggcccgggaggacctggacaaggtgctcaactactgcaggatcttcact
gagctgtgcgagacgttcctggagtccacggtccggaccccgggtcagggtctgggggac
ctgaggacgctggagctgctgctgatctgtgcagggaacccgcagtacgaggtggtggag
atctccttcaacttctggtaccggctgggagaacacctgtacaagatcaacgacccggct
ctgcacagcatcttcaggccgtacatacagagactccttcactgtctggcccggcactgc
cagctggacccggaccacgagggaatccccgaggacacagacgacttcggggagttccgg
atgagagtctcggacctcgtcaaggacgtcatcttcctggtcgggtccatggagtgtttc
tctcagctgtactccacgctaaaggacgggaacccgccctgggaggtgacggaggccgtc
ctcttcatcatggcctccatcgccaaaagtgtcgacccggagaacaacccgacgctgacg
gaggtgctgcagcaggtggtgctgctgccggagaacgtgcacatggccgtgcgctacacc
agcatcgagctggtgggggagatgagcgaggtggtggaccggaacccgcgcttcctggac
ccggtgctcagctacctgatgaagggcctgagggagaagccgctggcgtcggcggccgcc
aaggccatccacaacatctgctccgtgtgccgcgaccacatggcccagcacttccagggg
ctgctggagatcgcacggtcgctggactccttcgccctgtcctccgacgccgccgtgggg
ctgctcaaaggtacggcgctggttctgacccgtcttcctctggagaagatcgccgtgtgt
ctcagcgacctctgcgccgttcaggtcatcgcactcaagaagcttctgacggaagattct
accaacgggaagtcggccgacccgaccgtgtggctggaccggctggccgtcatcttcagg
tgggttagtgacccgcaggtggagagagcagatagaagacacacgaaccccatcgtggag
aacggccagagtcatccctgccagaaagtcatccaggagatctggccggttctgtcggag
acgctgaacacgcaccaggcggacaaccgcatcgtggagcgctgctgccgctgcctgcgc
ttcgccgtgcgctgcgtggggaagggctcggcgtcgctgctgcagccgctggtcacgcag
atggtgagcgtgtaccaggtgtacccccactcctgcttcctgtacctgggcagcatcctg
gtggacgagtacggcatggaggagggatgcaggcaggggctgctggacatgctgcaggcg
ctgtgcatgccgaccttccagctgctggagcagcccaacgggctgaggaatcaccccgac
accgtcgacgacctgttcagactggccaccaggttcgtccagaggagtccagtcacgtta
ctcagcagcagcatcatcgtccacatcatccagtgtgccatcgccgccaccggactggac
caccgagacgcaaactgcagcgtcatgaagttcgtgcgggacctgatccacacgggcgtg
gccaacgaccacgaggaagactttgaggtgcggaagcggctcatcagccaggccatggag
cagcacggccagcagctggtcaaccagctgctgcactcctgctgcttctgcctgcctccc
tacacgctgcccgacgtggccgaggttctctgggagatcatggtcttcgaccggccgacg
ttctgccgctggctggaaaacgctctgaaaagcttaccgaaggagacgtcgagtggggcg
gtgacggtcactcacaagcagctcacagacttccaccgacaggtgaccagcgcggaggag
tgtaagcaggtgtgctgggccatcagagagttcaccagactgtttcgatag
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