Cololabis saira (Pacific saury): 133424001
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Entry
133424001 CDS
T09849
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133424001 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133424001 (nup107)
03036 Chromosome and associated proteins [BR:
csai03036
]
133424001 (nup107)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133424001 (nup107)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133424001 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF4485
Motif
Other DBs
NCBI-GeneID:
133424001
NCBI-ProteinID:
XP_061570340
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All DBs
Position
23:complement(15773660..15784644)
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AA seq
908 aa
AA seq
DB search
MDWGQNELPSPVVRDDEVTVAARRRKKVAFPSPGSGTPIASTVTPARSLLRNTPASLYRQ
AVTPRVPDVSSIMATGGRTPRYLHTPRNVVSSVNLDDSDWTNSFYTSPVSGLENTSFFKD
DTANLSSALLKEDDPGEASAASLFPEFLASFVKHSSSAVFDLLEDYQALCQDKVDVLQSV
VLRAGQNSKTAGVRWLLQQENCTWRLIASLYRDRVQLALEDDMMIDMVAPSESEKIVVEQ
LFQRDAIVRQSQLVVDWLESISKDQTGEFSDNIEYYAKNVCWENTIHALKMRRKSGSALT
VPLVTELDPDAPLRQQRPLADLDREDDARLLKNLFMLIRAGMTDEAQRLCKRCGQAWRAA
TLEGWKLYHDPNLTSGSLELQPVEGNPQRGIWKACCWRMAEEEQLNRYERAIYASLSGNL
KPLLAVCDSWEDCVWAHFRVMVDSLVEKELMSSGMSHQEAETLPRGYLEANWTMEKVFEE
LQASESKRVLDETKEHYHIIQKFVILGDLDGLLEEFSDWLTASKTLPSHLLRFMSHLVLF
FRSLGLALKEEVCVDVLKAYVSLLIRDQQTELVASYVGQLPGELATVQYAAFLETVTQPE
LRPQCLQLATSAGLDVSAITKLVVETVRESDDTEFTHHSQTIETGTTKEDQRKIDIIDWL
LFEPAHRAEALKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMREIYCQWTGVGQTTPLPA
DDENAIREHLCIRAYLEAHQAFTDWFSHSSSAPQKPVPASEAKFTERVANEMREKEYQAA
LTAWSCRLDILTEDVKERIYNVLLFVDGGWMVDSRQQESEQDTERSHHMAALRSLCLPRL
TFLLLSVLQSSARHQEALRLADIISSDQHRLYQVFSKEELGRFLQKLRESSLALLDRGLD
PLGYELQS
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagaatgagctgccgtcgccggtggttcgagatgacgaggtgaccgtt
gctgcccgcaggaggaagaaggtggccttcccatcacctgggagtggcactcctattgct
tccacggtaaccccagctcgctccctgctgaggaacactccggcttctctgtacagacaa
gctgtaactccaagggttccagatgtttcctctatcatggcaacgggaggtcgaacgcct
cgatacttacacacaccaagaaatgtcgtcagtagtgtgaatttggatgacagtgactgg
accaacagcttttacacttcccctgtgtccggactggagaataccagcttctttaaagat
gacactgcaaacctcagctcagcactactaaaagaggacgacccgggtgaagcatcggct
gccagtcttttcccagagttccttgcttcctttgtgaaacactcttcctctgcagtgttt
gatctgttggaggactatcaggcactctgccaggacaaggtggatgtgctgcagtctgtg
gtgctgagagcaggtcagaacagtaaaaccgctggagtgcgctggctgctgcaacaggag
aactgcacctggagactcatcgcctcgctctacagggatcgggtccagttggcgctagaa
gatgacatgatgatagacatggttgctcccagtgagagtgagaagattgtagtggagcaa
cttttccagcgggatgccatcgtacgacagagtcagctggtcgtcgattggctggagagc
atctccaaggatcagactggagaattttcagataatatagaatattatgccaaaaatgtg
tgctgggagaacaccatccatgcgttgaagatgaggaggaagagtggctcagccttaact
gttcctcttgtcactgagctggacccagacgctcctctccggcagcagcgccccctggct
gacctggacagagaagatgatgcccgactgctgaagaacctgttcatgttgatcagagct
gggatgacggacgaggcacagaggttgtgcaaacgctgtggtcaggcctggagagcagca
acgctggaaggctggaaactctaccatgatcccaacctgacatcagggagtctggagttg
cagccagttgaaggaaacccacagagaggaatatggaaagcatgctgctggaggatggct
gaagaggagcagttaaacagatatgagagggcgatctatgccagcctgagtgggaacctt
aagccgctcctggctgtgtgtgactcatgggaggactgtgtatgggcgcacttcagagtg
atggtcgactcgctggtggaaaaggagctcatgtcatcaggaatgtcccaccaggaagct
gagacacttccgcggggatacctggaagccaattggaccatggagaaagtgtttgaagaa
cttcaagcgtcagagtcaaagagggtcttggatgagacaaaagaacattaccacatcatc
caaaagtttgtcatactgggagacctggatggtctgttggaggagttttctgattggcta
acagcctctaagaccctgccctcccacctgctccgtttcatgtctcatctggtgctgttt
ttccgctctctgggtttggcgttgaaggaggaggtgtgtgttgacgtgttgaaagcatac
gtctcccttctgatacgagaccagcagacagagcttgtggcgagctacgtcggtcaactt
cccggcgaacttgccacggttcagtatgctgcatttttggagactgtcacccagccagaa
ctccgtcctcagtgcctgcagctcgccaccagcgctggtttggatgtttctgcaataacc
aaattggtggtggagacggtacgagagagcgatgacactgagtttacccaccacagccag
acaatagaaacaggaactacaaaggaggaccaaaggaagattgacatcattgactggctc
ctgtttgaacccgcccatcgagctgaggccctgaagcagtccaatgctatcatgaggaag
tttcttgctctgcagaaacacgacgcagccaaggctgtgttctctaaagttccagaggat
tcgatgagagagatttactgccagtggacgggcgttggacagaccacaccgctccctgcc
gacgacgagaacgccatcagggaacacctgtgcatcagagcctatctggaagctcatcag
gccttcactgactggttcagccacagcagttctgctccacagaagccagttcccgcctct
gaggccaaattcacagagagagtggctaatgagatgagagagaaggagtaccaggctgcc
ctgacggcctggtcgtgtcgtctagacattctgactgaagatgtgaaggaaagaatctac
aacgtgttgctgttcgtggatggaggatggatggtcgacagtagacagcaggagtcagag
caggatacagagcgtagccatcacatggcagcgttgcgatctctgtgtcttcctcgcctc
accttcctgcttctcagcgtgctgcagagctctgcccgacaccaggaggcgctgcgactg
gccgacatcatctcgtctgaccagcatcgcctctaccaggttttctcaaaagaggagctg
gggaggttcctgcagaagctacgggagtcttcactcgctcttttggaccgaggacttgat
cctctgggctatgaactgcagtcatga
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