Cololabis saira (Pacific saury): 133424027
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Entry
133424027 CDS
T09849
Symbol
cdhr5-rs
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133424027 (cdhr5-rs)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Cadherin related
133424027 (cdhr5-rs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
ECD
PGM1_C
Asp5
Motif
Other DBs
NCBI-GeneID:
133424027
NCBI-ProteinID:
XP_061570383
LinkDB
All DBs
Position
23:complement(8400109..8409589)
Genome browser
AA seq
674 aa
AA seq
DB search
MTPCRLLLWQVALRVSCHLVTATLCLGGSDIFTSVRENSPKGQFISDINITVDPGSNTVR
LCLAGQNADWFYLEGRSIRLNLSGSRVLDREVQGPILIAELTCYEDDVLQTRFRILVEIL
NENDNKPIFVEETIRPLSVSELTAVNSVVFTVKAVDPDGDLISYVIDQSSGDAWFFRIDL
PNSGKVVLDKPLDYESRTQLQLVMWAQESNTAEKFKVSTELTVDVVDGDDQYPHFLPCTP
VSPGVPVCMSPVYTANITRKHQAGILDFSPGPIRAEDGDRGIDAPLVYTILSGDDQGRFV
INETTGEVNLTRAVDDRLQEANFTISVVVSQADDRLKYSVASVLVRVLCENVFPPAFNRT
TFKGFVIQNSSPASIVSTYGNRVLQMQALDGDFADGVNPNIRYHLHPPSPLYQVTREGVL
IGRTDRLHAFDRHILQVIARDEESGEEVSASVDIEVLQRGQTVPRGAFTEQQLFGDVDGR
LAGGVAVLILLAILAAVLFVMLQTIRRRQQENPAQHAEASGKLPRVVNPSPPAFMEAAAY
HGTAFSHQSGSFHGREGVYTRRPSLPPPPPPHPAPPSWTRPSAPPEVLMGEPVGLRRLQT
ELFVVVEEPEGGSSSWETLRADDVPGGQRSAGEDVPAEDEDVKTEQCRKLRILYPVDERA
EKPTTPEMYPETSA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacgccctgcaggctgctcctgtggcaggtggctctcagagtgtcctgccaccttgtt
acagccaccctgtgtctgggcggctcggacatcttcacatcggtcagagagaacagtccg
aagggccagttcatctccgacatcaacatcaccgtcgacccgggatccaacaccgtccgc
ctgtgtctggcgggacagaacgccgactggttctacctggagggtcgatccatcagactc
aacttatcaggatccagagttcttgaccgagaggtccagggtccgatcctcatcgcagag
ctcacctgttacgaagacgacgtcctgcagacccgcttccggatcctggtggagattctg
aacgaaaacgacaacaagcccatattcgtggaggaaacgatccggccgctcagcgtcagc
gagctgacggcggtgaactcagtggttttcactgtgaaggccgtcgaccccgacggggac
ctaatcagctacgtcattgatcagtcatcgggcgacgcctggttcttcaggatcgacctg
ccgaactccgggaaggtggttctggacaaaccgctggactacgagagcaggacccagctg
cagcttgtcatgtgggcccaggaatcgaacacggccgagaagttcaaagtctcgacggag
ctcacggtggacgtggtggacggagacgaccagtacccccacttcctgccctgcacaccc
gtgtccccaggtgtccccgtctgtatgagccctgtctacacggccaacatcacgcggaaa
caccaggccggcatcctggacttctctcctggtccgatccgagccgaggacggcgacaga
ggaatcgacgcgccgctcgtctacacgatcctctcaggtgatgaccagggcaggtttgtg
atcaacgagacgacaggtgaggtgaacctgacccgggccgtggacgaccgactgcaggag
gctaacttcaccatcagcgtcgtggtgagccaggcggacgaccggctgaagtacagcgtg
gcctcggttctggtccgggttctgtgtgagaacgtgtttccaccagccttcaacagaacc
accttcaaagggttcgtgatccagaactccagccctgcctccatcgtctccacctacggg
aaccgggtgctgcagatgcaggcgctggacggagacttcgctgatggcgtcaaccccaac
atccgctaccacctccaccccccgtcccccctgtaccaggtgacccgggagggcgtcctg
atcggccggacggaccggctacacgccttcgacagacacatcctccaggtcatcgccagg
gacgaggagtccggagaggaggtttcggcttcggtggacatcgaagtcctgcagagggga
caaacggtgccacgcggtgcgttcacggagcagcagctgttcggagacgtggacggccgg
ctggcgggaggagtcgccgtgctgatcctgctggctattctggcggcggttctgttcgtg
atgcttcagacgatccggaggaggcagcaggagaaccccgctcaacatgctgaggcctct
gggaaactcccccgcgtggtgaacccgagtccgcctgccttcatggaagcggccgcgtac
cacggcacagctttcagtcaccagtcaggcagtttccacggtagagaaggtgtttacacc
cggcggccgtccctgccaccccctcctcctcctcatccagcgccgccatcgtggaccaga
ccttccgcccctccggaggtcctcatgggcgagccggtcggactccgccggcttcagacc
gaactcttcgtcgttgtggaggaacccgaagggggaagttcgtcctgggaaacgctcaga
gcagacgacgtcccgggaggtcagcggtcggccggcgaggacgtccccgcagaggacgag
gacgtgaaaacagagcagtgcaggaaacttcggatcctttatccagtcgatgagagagca
gaaaaaccaaccacacctgagatgtacccagagacgtcagcctga
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