Cololabis saira (Pacific saury): 133424077
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Entry
133424077 CDS
T09849
Name
(RefSeq) toll-like receptor 1
KO
K10169
toll-like receptor 6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04620
Toll-like receptor signaling pathway
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133424077
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133424077
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133424077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133424077
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133424077
04090 CD molecules [BR:
csai04090
]
133424077
Membrane trafficking [BR:
csai04131
]
Endocytosis
Phagocytosis
Toll-like receptors
133424077
Pattern recognition receptors [BR:
csai04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133424077
CD molecules [BR:
csai04090
]
Proteins
133424077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_NXF1-5
LRRCT
LRR_LRWD1
LRR_At1g61320_AtMIF1
PrgI
Motif
Other DBs
NCBI-GeneID:
133424077
NCBI-ProteinID:
XP_061570458
LinkDB
All DBs
Position
23:complement(31611835..31615100)
Genome browser
AA seq
811 aa
AA seq
DB search
MVSLMAADCTAPVENDKGFKMCVTVRRGMKDYSDQNLTDVPNNLSSDTQYLDISYNFIRK
LNAAPFFGLSQLCCLKVTHCGLREISPGVFNHTPALKVLNISHNDLSFIPELPLKQLKIL
DLDSNLYPSYRIPESFQDLTSLDLLSLGSTAAKAIHLNDFDPFMNVSLRHLVLGAGFQWQ
KYDSGSLVKLKHLQKLSLRASFCENFTMFENLLMDLNRTQVKYLRFISVFPDNCVVRGNP
FQNLRTMRFVRNLTIENTWINSSFMESLLKNVWLSPLYDLSFVNITYNEDTPDGFQFRTI
NHTININSVTFKGIHHYQYKYPTFNMSFDAVSNLTYLKFSGTGMNILPCKVISALPSLNT
LDLSDNLLSETGFWWPQCSYTSAFPKLQTLSLSQNRFVSLSFISQRVHHMKALESLDLSF
NFISLDEDCSWPVHIVQLNLGNNNNLGNNVFRYLSPHFQKIDLSKTGITAITQDDLSRFP
DLTHLILSSNSIQVLPGTLTFSTLVSLHVDQNALTSISKEVLAQLPRLQSLKAGNNPFFC
SCDSYWFVTVFNKSLLVDWPLDYTCNTPPSLSGLPLSEYKPSELSCETWLQAAIALPVVI
VVSAATALVFYKCDGVWYTKMLWTWIRMKRRGNKRSNMLNNASFSYHAFISYSHQDSGWV
DDQLVPSLEGAGFSLCVHERDFVPGEWIIGNIINCVESSYKTLFVLSKHFVQSEWCNYEL
FFAQHRAVDVQRDSLVFILLEPIPLDSLPKRFLRLRSLLRQQTYLEWPKGEQKQRLFWAS
LRSVLHTADKSVLKDVAEDISDLLPLVTDQV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctcatggcagctgactgcacagctccagtggaaaatgacaagggctttaaa
atgtgcgtcaccgtgaggcgagggatgaaggactactccgaccaaaacctgacggatgtt
cccaacaatctctccagcgacacgcagtacctggatatttcctacaacttcatccgcaaa
cttaacgcagctccgttttttggattatctcagctctgttgcctgaaggtgacccactgt
ggcctgagggagatttcacccggtgtgttcaatcacacaccagctctcaaggttctcaac
atatctcacaatgacttatccttcattccagaacttccactgaaacagctgaaaattctt
gatctggatagcaatctgtaccccagctaccggataccggaatcctttcaggatttaacg
agtctggatctgctgtcgctgggtagcacagctgccaaggcaatccacctcaatgacttt
gatccattcatgaatgtgtctctgcgacacctagttttgggagcaggctttcagtggcaa
aagtacgattctggttctctggtgaagctcaagcatctccaaaaactttcccttcgtgca
tctttctgtgagaacttcaccatgtttgaaaaccttctcatggacctgaatagaacgcaa
gttaaatatctgcgattcatctctgtgttcccagacaattgcgttgtgaggggcaacccc
ttccaaaacctgagaacaatgcggtttgtaaggaatctcaccatagagaacacttggatc
aacagctcgtttatggagtcgttactgaagaacgtgtggctctccccgctttacgaccta
tcgttcgttaacatcacctacaacgaagatacccctgatggatttcagtttcgcaccatc
aatcatacaatcaacatcaactctgttaccttcaaggggattcatcactatcagtacaaa
taccccactttcaacatgagctttgatgccgtctccaacctgacgtatctcaagttttct
gggactggaatgaacattttaccctgcaaagtaatatccgcccttccgtccctgaatacg
ctggatctgtctgacaaccttctatcagaaacaggcttctggtggcctcagtgctcatac
acctctgctttccccaaactacagacactttcattgagccagaaccgcttcgtcagtctg
tccttcatctctcagagagtgcatcacatgaaggcattagaatcactagatctcagcttc
aacttcatctccttggacgaggactgttcttggcctgttcatatagtccagctcaacctg
ggaaacaacaacaacctgggaaacaacgtctttagatatctgtcaccacactttcagaag
attgacttgtcaaagacggggataacagccataacgcaagacgatctgtcccgctttcca
gacctgacgcatctcatcctcagctccaacagcatccaggtcctcccaggaactctgacc
ttctccaccctggtcagcctccacgtggaccagaatgccctcacgtccatatccaaggag
gtgttggcgcagctgcccaggcttcagagcctcaaagctggaaacaatccctttttctgt
tcatgtgactcctactggtttgtgactgttttcaacaagtctttgcttgtggactggcct
ttagattatacgtgcaacacgccgccgtccctttcaggcctgccgctttcagagtacaaa
cccagcgagctgtcctgtgagacgtggcttcaggccgccattgctttgcctgtggtgata
gtcgtatctgcagccacggctctggttttctataaatgtgatggagtctggtacacaaag
atgctgtggacctggatcaggatgaagcggagaggcaacaaacgctccaacatgctgaac
aatgcatccttctcgtatcacgcgttcatctcgtacagccaccaggactccggctgggtg
gacgaccagctggtcccttctctggaaggtgccggcttttcactctgcgtccacgaacga
gactttgtccccggtgagtggataataggcaacatcatcaactgcgtggagtccagctac
aagacgctgttcgtgctctccaagcactttgtgcagagcgaatggtgcaactacgagctc
ttctttgctcaacacagggctgtcgacgtccagcgggactcgctggtcttcatattgctg
gagccaatcccattagactctcttcccaagaggttcctgaggctcaggagtttgctgagg
cagcagacgtacctggagtggccgaagggcgaacagaagcagcggctcttctgggccagt
ctgaggtccgtgctgcacacggcggacaaatctgttcttaaggatgtagcggaagacatc
tcagatttactgcctctggttactgaccaagtgtga
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