Cololabis saira (Pacific saury): 133424202
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Entry
133424202 CDS
T09849
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133424202 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133424202 (apex1)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133424202 (apex1)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133424202 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
133424202
NCBI-ProteinID:
XP_061570644
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All DBs
Position
23:29621322..29630630
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AA seq
311 aa
AA seq
DB search
MKRGKKTEEAAAEGENDSGSETTTKKTKKTKEPEAPILYDDPPDKTTSKDGRSPNMKITS
WNVDGLRAWVKKKGLDWVREEAPDVLCLQETKCGEKALPADITSMPEYPHKYWAVSDEKE
GYSGVAMLCKTEPIKVTYGIGKEEHDSEGRVITAEFPNFYLVTAYVPNSGRGLVRLDYRK
TWDVDFRNYLSELDVQKPLVLCGDLNVAHQEMDLKNPKGNKKNAGFTPEEREGFSQLLEA
GFVDSFRDLYPEQTNAYTFWTYMMNSRSKNVGWRLDYFVLSSSLLPGLCDSKIRNQAMGS
DHCPITLHIAV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggggcaagaagacagaggaggcggctgccgagggagagaatgactcgggctca
gaaactactacaaagaaaactaagaagaccaaggaaccagaggctccgatactgtacgac
gatcctcccgacaagacgaccagcaaagacggacgcagccccaacatgaagatcacctcc
tggaacgtggatgggctgagggcgtgggtgaagaagaagggcctggactgggtccgcgag
gaggccccggacgtgctgtgcctccaggaaaccaagtgtggggagaaagccctgccggcg
gacatcacgtccatgcccgagtacccgcacaaatactgggccgtgtccgacgagaaggag
ggctacagcggcgtcgccatgctctgcaagactgaacccatcaaagtgacgtatggaatt
ggaaaagaagagcacgacagcgagggccgcgtcatcactgccgagttcccgaacttctac
ctcgtcaccgcctacgtccctaactccggccgaggcctcgtccggctcgactaccgcaag
acctgggacgtggacttccgcaactacctgagcgagctggacgtgcagaagcccctggtg
ctgtgcggcgacctcaacgtggcgcaccaggagatggacctgaagaaccccaagggcaac
aagaagaacgccggcttcaccccggaggagcgcgagggcttcagccagctgctggaggcc
ggctttgtcgacagcttccgcgacctgtacccggagcagaccaacgcctacaccttctgg
acctacatgatgaactcccgctccaagaacgtgggctggaggctggactatttcgtgctg
tcgtcctccctgctgccgggcctgtgcgacagcaagatccggaaccaggccatggggagc
gaccactgccccatcaccctgcacatcgccgtgtag
DBGET
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