Cololabis saira (Pacific saury): 133424272
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Entry
133424272 CDS
T09849
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04621
NOD-like receptor signaling pathway
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133424272
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133424272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133424272
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133424272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
NPHP3_N
Sigma54_CBD
AAA_22
ABC_tran
NB-ARC
RsgA_GTPase
Roc
Motif
Other DBs
NCBI-GeneID:
133424272
NCBI-ProteinID:
XP_061570758
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All DBs
Position
3:complement(7287723..7306634)
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AA seq
957 aa
AA seq
DB search
MAECGAVAMAECGAVAMAERGAVAMAMPCLLLLTAHRELLVGRLRSVQCLLDNLRASGYF
CEEDEEIVQRTATKADQVRKILELVQCKGEEACEYFIFIIYKVCDAYIDLQPWLKEINYN
PSDEMRDVTVVNTDPISRYCQKLRHEMSRDTSFIMSYGQRDETRLEDLYTDTVMELFNDS
NECLGLLESVEQLLGDNDLFNPQGEIIYVMGDAGVGKSILLQKLQNLWSKKELQTDAIFF
FKFRCRMFSIFKEAEQISLRDLLFKYNCHPDHDPDNEVFDYILRFPEKVIFTFDGYDEIQ
EDVDLVDVPEVVSPEDKASPLQLLISLLCGKLLKGSKKVLTARTGIEIQHRVIRKKVALR
GFSPDQMKTYIDLHFKEQEHRELVSVQLDASPHLCGLCSTPLFCWIVFKSFKHLHTMHDS
FNLPETSITLTDIFLLLSEVFLSRLATRGPSLLKKSVRSAADTFKAGLRSLDAFAKLALG
GLERGNFFFSQEEVDECGLTEDDLALGFLRPLSDHDAGGSPATFEFLHITLQSFLAAFAL
VLDERANASAILKFFTECSRRRDPLCLVFCTKRSEKPGEKKLFATNEHLQFTNMFLCGLL
AKTQMGLMGHLLSPSILKKKQVLLKSYLSTSVKFHLQGLPHYNGEDGKKIHVLPNFLWMI
RCIFETGSKDIAKMTAKGISVHFIKLGYCNVYSGDCTALNFVLQHRQKLLRLDMDNNNIS
DYGVKQLQPSFCKMTVVRLCVNNLSDSSIEVLAEELCKHKIVEILGLYNNRITDAGAKLV
ARIIEECPKLAIVKIGKNKITSVGGRYLARAIQKSTSIFDVGMWGNSIGDEGAQAFAEAL
RNHPSLTNLSLSANGISSKGGIFLAKALKENRVLRIFWLVQNELADDAAPHLAGLIQANT
GLRHLWLISNRLTVDGIQILADGLTNNAELKEICVKGNQVSEEEEKRFLTEKRLRFH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgtggtgccgttgccatggctgagtgtggtgccgttgccatggctgagcgt
ggtgccgttgccatggcgatgccgtgccttctcctgctcaccgcccacagggagctcctg
gtcggccgcctgcgcagcgtccagtgcctcctggacaacctgcgcgcctccggatacttc
tgcgaggaggatgaggagatcgtccagcgaacggccaccaaagcagaccaggtgcgcaaa
attttggagttggtccagtgcaaaggggaggaagcctgtgaatacttcattttcatcata
tataaagtatgtgatgcatatatagatctccagccatggctgaaagaaatcaactacaac
ccgagcgatgaaatgagagatgtgacagtggtgaacacagaccccatcagcagatactgc
cagaagctgcggcatgagatgagcagggacaccagcttcatcatgtcctacggacagcga
gacgagacccgtctggaagacctctacaccgacacggtcatggagctcttcaacgacagc
aatgaatgtctgggcctcttggagagtgtagagcagctcctaggagacaatgatttgttc
aaccctcaaggagaaatcatttacgtgatgggggatgccggtgtaggaaaatccatcctc
ttgcagaagctccagaatctctggtccaagaaggagctgcagacggacgccatcttcttc
ttcaagtttcgctgcaggatgttcagcattttcaaggaggcggagcagatctccctcaga
gaccttttattcaaatacaactgccatccggatcacgatccggataacgaagtctttgac
tacatcctgcgcttccctgagaaggtgatcttcacctttgacggctatgatgagatccag
gaggacgtggacctcgtagatgttccagaagtggtctccccggaggacaaggccagcccc
cttcagctgctcatcagcttactctgtgggaaactactcaaaggctccaagaaggtgctg
acggcccgaacagggattgaaatccaacacagggtgatcaggaagaaggtggctctgcgc
gggttctccccggatcagatgaagacgtacattgacctgcacttcaaggagcaggagcac
agagagctggtgtcagtccagctggacgccagtccccacctctgcggcctctgctccacc
ccgctcttctgctggatcgtcttcaagagcttcaagcaccttcacaccatgcacgatagt
ttcaatctgcccgaaacctccatcacgctaacggacatcttcctcctgctgtccgaagtg
ttcctcagccgtttggcaacacgcggtccgtcgttgctgaagaagagcgttcgctcggct
gccgacacattcaaagcagggctcagatctctcgatgcatttgcaaagctggcactcggg
ggtctggagagagggaacttcttcttcagccaagaagaggtggatgagtgtggtctgaca
gaggacgacttggccctgggattccttcgacctctcagtgaccacgacgccggaggaagc
cctgctacctttgagttcctccacatcaccctccagtctttcttggctgcgtttgctctc
gtgctggatgagcgggccaatgccagcgccatcctcaagttcttcacggagtgcagcagg
cggagagacccgttgtgtttagttttttgtacaaagcgctctgaaaagcctggtgaaaag
aagctatttgcaactaatgaacaccttcagttcaccaacatgttcttgtgtggactgctg
gcaaagactcagatgggtctgatgggacatctgctctccccttccatattaaagaagaaa
caggttttgttgaagtcgtacctgtccactagtgtcaagttccacctgcagggcttaccc
cactacaacggcgaggacggcaaaaagattcacgtgttgcccaacttcctctggatgatc
aggtgcatctttgagacggggagcaaggacatcgctaagatgacggcaaaaggcatctca
gtgcacttcatcaagctgggctactgtaacgtgtactcgggggactgcaccgctctgaac
tttgtcctgcagcatcgccagaaactcctgcgtctggacatggacaacaacaacattagt
gactacggggtcaagcagcttcagccgtccttttgcaagatgacggttgtgagattgtgt
gtcaacaacctgtcagacagcagcatcgaggttctggcagaagagctgtgtaaacacaaa
attgtggagatcttggggctttacaacaatcgcatcacagatgcaggagccaagcttgtt
gcccgcatcattgaggaatgccccaagctggcaatcgtcaagattggtaagaacaagatc
acgagtgtgggtgggaggtatttggccagagccattcagaagagcacctccatatttgat
gtggggatgtggggaaacagcatcggggatgagggagcccaagcctttgctgaagctttg
aggaaccacccaagtcttaccaacctcagtctgtcagccaatggcatttcatcaaaagga
gggattttcctggcaaaagctctgaaggagaaccgagtcctgaggatattctggttggtg
cagaacgagctggccgacgacgcggctccacacttggccgggttgattcaagccaacaca
ggtctccggcacctctggttgatcagtaaccggttaactgtggacgggatccaaatcctt
gcagacggtctaaccaacaacgcagagctcaaagagatatgcgtgaaaggaaaccaggtc
tctgaagaggaagagaagcgctttttgacggagaaacgtctgcgcttccactga
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