Cololabis saira (Pacific saury): 133424330
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Entry
133424330 CDS
T09849
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133424330 (scube1)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
133424330 (scube1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
133424330
NCBI-ProteinID:
XP_061570846
LinkDB
All DBs
Position
23
Genome browser
AA seq
1021 aa
AA seq
DB search
MGRGACFPRDVCVFILLLNTCRVMGNAALADVDECAEDSDDCHIDALCQNTPMSYNCICK
PGFKGDGKHCEDMDECENDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVEECLD
NNGGCQQVCVNTMGSYECQCTDGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICREAPGK
GGVSCECRPGFELAKNQKDCTLTCNYGNGGCQHTCDDTDTGPVCGCHQKYALHSDSKTCI
EKDEAAIESSEFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFT
LQPDGKTCKDIDECQENNGGCDHFCRNTVGSFECSCQKGHKLLTDERTCQDIDECSFERT
CDHTCINYPGSYECVCNKGFILYGLTHCGDIDECSISNGSCEFGCINTQGGYECVCPPRQ
KLHWNKKDCIQAVKCLPNGKPAPRAQLTCTKSGGTEVCSLSCPSNALFLADSENSYTLSC
GVPVQHGKTSQKRNATSALPTCADTLAPPIKQKARFKIKDAKCHLRPRNKETNKETSKQN
LQGGQFPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEMEMKEEEASDSCNI
DCVRERMKQKLQNAMRTLRKSINKQQFYIQISGTEYEVAQKPARTPEGAETCSTGQVHRD
GKCVSCGVGTFYSGEQAQCVPCLPGTYQDMVGQLSCEPCPSTEGQGIAGAKNVSQCGGQC
PAGHFSADGFRPCQACPPGFYQSEAGRVLCFPCGGGLMTKYEGSVSFKDCEAKVHCAPGH
YYNSSTHRCIRCPAGTYQSEFGQNYCITCPGNTTTDFDGATNVSHCKNQLCGGELGEYTG
YIESPNYPGDYPSNVNCVWTINPPHKRRILIVVPEIFLPIEDECGDVLVMRKSALPTSIT
TYETCQTYERPIAFTSRSRKLWIQFKTNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRL
YASENHQEILKDKKLIKALFDVLAHPQNYFRYTAAESKEMFPRSFIKLLRSKVTRFLRPY
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaggagcgtgttttcctcgggacgtctgtgtgtttatcctcctcctaaatact
tgcagggtgatggggaacgccgctctcgcagatgtggatgaatgtgcagaagattcagac
gactgccatatcgatgccctctgccagaacacgcccatgtcttacaactgcatctgcaaa
ccaggctttaagggagatggcaagcactgtgaggatatggacgaatgtgaaaatgactac
aatgggggctgtgtacacgaatgcatcaacatacctggcaactacaggtgcacctgctat
gatggattcatgctggcccacgatggacacaactgtttagatgtggaggagtgtctggac
aacaatggtggatgccaacaagtgtgcgtcaacacgatgggaagctacgagtgtcagtgc
acggacgggtttttcctcagcgacaaccagcacacctgcatccaccgctctgacgatgga
atgaactgcatgaacaaagaccatggctgtgctcatatctgcagagaggctccaggcaaa
ggcggggtgtcatgcgagtgccgtcctggctttgagttggccaaaaatcagaaagactgt
actttgacttgtaactatggaaacggcggttgccagcacacatgtgatgacacagataca
gggccggtgtgtggctgccaccaaaagtacgccctgcactcagacagcaagacctgcatt
gagaaagatgaggctgcaattgagagctctgagttcaatgccacgtcagtagctgatgtg
gacaagcgggtgaaacggcggctacttatggagacttgtgccgtaaacaacggtggctgt
gacaggacatgtaaagacacggccacaggggtgcgctgcagctgccccgtgggattcacc
ctgcagcctgacggcaaaacctgcaaagacattgatgaatgccaggagaacaacggaggc
tgtgatcacttttgtcgaaatacagtgggctcctttgagtgcagttgccagaaaggccat
aaacttcttactgatgaacggacatgtcaagacattgatgagtgctcctttgagaggacc
tgtgaccacacctgtatcaactacccaggcagctacgagtgcgtgtgcaacaagggattt
atcctatatggacttactcactgtggagatattgatgagtgcagcatcagcaacggcagc
tgtgagtttggctgtataaacacacagggcggctatgagtgtgtgtgtccaccaagacag
aaactccattggaacaagaaagattgcatacaggcagtaaagtgtcttcccaatggaaag
ccagcaccaagagcccaattgacttgtaccaagagtggagggacagaggtttgttcactg
tcatgcccctccaacgctctctttctcgcagactcagagaacagctatacactgagctgt
ggtgtgcctgttcagcatggtaaaacttctcagaagaggaatgctacttctgctttaccg
acctgtgctgacacgctggcaccgcccatcaagcagaaggccaggtttaagatcaaggat
gccaagtgccacctgaggccacgcaataaggagacaaacaaagaaacatctaagcaaaat
cttcaaggaggccagttcccctgcacagacgactgtcaagtaacttttgtcaatctcaag
tgcgattcatcaaagaagcgtcgcagaggacgcaaatctccttcaaaagaggtttcccat
attacagctgagtttgaaatggagatgaaagaggaggaagcctcagactcctgtaacatt
gattgtgtgcgagagaggatgaaacagaaactgcagaatgctatgcggacactcagaaaa
tccatcaataaacaacagttctacatccagatttctggaacagagtatgaagttgcccag
aaaccagccaggacaccggagggagctgagacctgcagcactggacaagtccaccgagat
ggaaagtgcgtgagctgtggtgtggggacattttatagtggggagcaggcgcaatgtgtc
ccatgccttcctggaacataccaggacatggttggccagctgtcctgtgagccatgtccc
agtactgaaggacagggcattgctggtgccaagaatgtgtctcagtgtggaggtcagtgt
ccagcaggtcatttctctgcggatggattccgcccgtgccaggcctgtcctccgggcttt
tatcagtcagaagccggccgggtcttgtgcttcccgtgtggagggggactaatgaccaaa
tatgaaggatctgtttcctttaaggattgtgaggccaaagtgcactgtgcccctggacat
tactacaactccagcacccaccgctgtatccgctgccctgcagggacgtaccagtcggag
tttgggcagaactactgcatcacctgccccggaaacaccaccaccgactttgacggagcc
accaatgtctcccactgcaaaaaccagttatgtggaggagaactgggagagtacaccggc
tacatcgagtctcctaactatcccggagattacccatcaaacgtcaactgtgtctggacc
ataaacccgccgcacaaaaggagaatcctcattgtggtgccagaaatcttcctccccatc
gaagatgagtgtggagatgtgctagtcatgaggaagagcgccctgcctacatccatcacc
acctacgagacctgccagacctacgagcgtcccatcgccttcacctctcgctcacgcaaa
ctctggatccagtttaagaccaacgagggcaacagtggcaaaggcttccaggttccatat
gtcacctatgatgaggactaccagcagctgatagaggacattgtgcgagacggcaggctt
tacgcctctgaaaaccaccaggagatattgaaggacaagaagctgataaaagcgctgttt
gacgtacttgctcacccccagaactacttcaggtacacggcagcagagtccaaagagatg
ttccctcgctccttcatcaagctgctgcgctccaaagtcaccagattcctacgaccatac
aaatag
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