Cololabis saira (Pacific saury): 133424429
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Entry
133424429 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133424429
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133424429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
LRR_6
FISNA
NACHT
NOD2_WH
LRR_1
LRR_4
PRY
SPRY
AFG1_ATPase
DUF5891
CFAP143
Motif
Other DBs
NCBI-GeneID:
133424429
NCBI-ProteinID:
XP_061571022
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Position
23:complement(457047..482641)
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AA seq
1324 aa
AA seq
DB search
MDRCEDGEEGVPPSKTSLCGEHESRSKAQRNQPGPGPGPGLGPGPGPGPGPGPGPGPGPG
PGPGPGPGPGPGPGPGPGPSCVSLKSDQSKEYVIKFKGEQRSGVKRVHQKRDSLEREPSC
LSLKSDWSKDWLIDFKGDQHSSSEREDQQISESPSGPSVQQHQTPLDSIFQLLEDDIVMF
VKDELKKIQKVLSPDYPESSESLMEDEDEEQKSIRETFMKITVKFLRRRKQEKLADLLQS
KTVAAICQSKLRRQLQKKYQHVSEGITKAGKTTLLEQIYTELYITEGGTGEVIEEHEVRQ
IEAASRKPDSAETAIRQEDIFKPPPGRGGPIRTGMTKGVAGIGKTVLTQKFSLDWAEGRT
NQDIQFLLPFTFRELNVLREEKFSLVELVHRFFSETRKICSFEEFQVVFIFDGLDECRLP
LDFHNSTIVSDPRRSTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPDCVSMVTEVR
GFTDLQKEEYFRKRIREEEQTKIISHIKTSRSLHIMCHIPVFCWITATVLEKVLETREGG
ELPKTLTEMYIHFLVVQAKLKKVKYDGGAETDPHWSPESRTMVESLGKLAFEQLQKGNLI
FYESDLRECGIDVREASVYSGVFTQIFREESNLYQDQVFCFIHLSVQEFLAALHVHLTFI
KSGVNLLEEQRNTSRWFKTRAETQLYQSAVDKALQSPNGHLDLFLRFLLGLSLETNQTLL
RGLMTSNQRSSQKTIKYIKKKISEDLSAERSINLFHCLNELNDRSLVKEVQEFLRSGRFS
TDKLSPAQWSALVFILLSSEEDLEVFDLKKFSASEETLRRLLPVVKASKKVLLSGCHLSG
EICPLLSSVLSSQSSNLTELDLSNNDLQDSGLKKLCPGLESPHCKLESLRLSGCLISEKG
SSSLVSALTSNPSHLRELDLSYNHLQDSGLKKLCPGLESPHCKLESLRLSGCLISEEGSS
SLVSALTSNPSQLRELDLSYNHLQDSGLKKLCPGLESPHCKLESLRLSGCLISEEGSSSL
VSALTSNPSHLRELDLSNNNLQDSGLKKLCPGLESPHCKLESLRLSGCLISEEGSSSLVS
ALTSNPSHLRELDLSYNHPGESAEKLLSGLEDPCWRLDTLRVEPAGQRFLTPGLRKYSCQ
LTVDTNTVNKDIKLSDNNRKMMFVREDQSYPDHPDRFDYWDQLLCREVLTGRCYWEVQWS
GHVSVSVSYRRISRKGDSDDCRFGRNDHSWSLICSPGHQYSVCHNNRETSVTSSSPCPRS
GRAAVYVDVPAGTLSFYEVVSDRLIHLHTFNTSFSEPLCAGFWLYWYMSVSGPRPVSSVS
LCPV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggaccggtgtgaggacggagaggagggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctggacctgga
cttggacccggacccggacctggacctggacctggacctggacctggacctggacctgga
cctggacctggacctggacctggacctggacccggacccggacctggacctggacccagt
tgtgtgtccttgaagagcgaccagtcaaaggaatatgtcattaagttcaaaggagagcaa
cgttctggtgtaaagagggtccatcagaaaagagactctcttgaacgtgaacccagctgt
ttgtccttgaagagcgactggtcaaaggactggttaattgactttaaaggagaccaacat
tcttcttcagagagagaggaccagcagatctcagagtcccccagtggtccgtctgtccag
cagcatcagacaccgctggactccatctttcagctgctggaggacgacatcgtcatgttt
gtgaaggacgagctgaagaagatccagaaggttctgagtccagattacccagaatcctca
gagagtctgatggaggatgaagatgaagagcagaagagcatcagagagacattcatgaag
atcacagtgaagttcttgaggaggaggaagcaggagaagctggctgacctcctgcagagc
aagaccgtcgctgccatttgtcaatccaaactcagacgtcagctgcagaagaagtaccag
catgtgtctgaggggatcactaaagcaggaaagacaacccttctggagcagatctacacg
gagctctacatcacagagggagggaccggagaggtcatcgaagaacatgaagtcagacag
attgaagcagcttccaggaaaccggacagtgcagaaacagccatcagacaggaagacatc
tttaaacccccacctggaagaggaggaccaatcagaacagggatgacgaagggagtggcc
ggcatcgggaaaacagtcctaacacagaagttcagtctggactgggctgaaggcagaacc
aaccaggacatccagttcctgcttccattcaccttcagagagctgaatgtgctgagagag
gagaagttcagcttagtggaactagttcatcgattcttctctgaaaccagaaaaatctgc
agctttgaagagttccaggtcgtgttcatctttgacggtctggatgagtgtcgacttcct
ctggacttccacaactctacaatcgtcagtgaccccagaaggtccacctcagtggacgtg
ctgctgacaaacctcatcagggggaagctgcttccttctgctcgtctctggatcaccaca
cgacccgcagcagccaatcagatccctcctgactgtgtctccatggtgacggaggtcaga
gggttcactgacctacagaaggaggaatacttcaggaagaggatcagagaagaggagcag
accaagatcatctcccacatcaagacatcacggagcctccacatcatgtgccacatccca
gtcttctgctggatcactgctacggtcctggagaaagtcctggaaaccagagagggaggg
gagctgcccaagaccctgactgagatgtacatccacttcctggtggtccaggccaaactg
aagaaggtcaagtatgacggaggagctgagacggatccacactggagtccagagagcagg
acgatggtggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatc
ttctatgaatcagacctgagagagtgtggcatcgatgtcagagaggcttcagtgtactca
ggagtgttcacccagatctttagagaggagagcaacctgtaccaggaccaggtcttctgc
ttcatccatctgagtgtccaggagtttctggctgctcttcatgtccatctgaccttcatc
aagtctggagtcaacctgctggaggaacaaagaaacacctccaggtggtttaaaacaaga
gcagagactcagctctatcagagtgctgtggacaaggccttacagagtcccaatggacac
ctggacttgttcctgcgcttcctcctgggtctttcactggagaccaatcaaactctctta
cgaggtctgatgacatcaaaccagagaagttcacagaaaactatcaaatacatcaagaag
aagatcagtgaggatctgtctgcggagagaagcatcaacctgttccactgtctgaatgaa
ctgaacgatcgttctctggtgaaggaggtccaagagttcctgaggtcaggacgtttctcc
acagataaactgtctcctgctcagtggtcagctctggtctttatcttactgtcatcagaa
gaagatctggaggtgtttgacctgaagaagttctcagcttcagaggagactctacggagg
ctgctgccagtggtcaaagcctccaagaaagttctactgagtggctgtcacctctcaggg
gaaatctgtccacttctgtcctcagttctcagctctcagtcctccaatctgacagaactg
gacctgagcaacaacgacctgcaggattctggactgaagaagctgtgtcctggactggag
agtccacactgtaaactggagtctctcaggctgtcaggctgtctgatctcagagaaagga
agttcttctctggtctcagctctgacctccaacccctcccacctgagagagctggacctg
agctacaaccacctgcaggattcaggactgaagaagctgtgtcctggactggagagtcca
cactgtaaactggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagttct
tctctggtctcagctctgacctccaacccctcccagctgagagagctggacctgagctac
aaccacctgcaggattctggactgaagaagctgtgtcctggactggagagtccacactgt
aaacttgagtctctcaggctgtcaggctgtctgatctcagaggaaggaagttcttctctg
gtttcagctctgacctccaacccctcccacctgagagagctggacctgagcaacaacaac
ctgcaggattctggactgaagaagctctgtcctggactggagagtccacactgtaaactg
gagtctctcaggctgtcaggctgtctgatctcagaggaaggaagttcctctctggtctca
gctctgacctccaacccctcccacctgagagagctggacctgagctacaaccatccaggg
gagtcagcagagaagcttctgtctggactggaggatccctgctggagactggacactctc
agggtggagcctgctggacaacgatttctgacaccaggtctgaggaagtattcctgtcaa
ctcaccgtcgacacaaacacagtcaacaaggacatcaaactgtctgacaacaacaggaag
atgatgtttgtgagggaggatcagtcgtatcctgatcatccagacaggtttgattactgg
gatcagcttctgtgtagagaagttctgacgggtcgctgttactgggaggtccagtggagc
ggacatgtttctgtatcagtgagttacagaagaatcagcaggaaaggagactctgatgac
tgtaggtttggaagaaacgatcattcctggagtctgatctgttctccaggtcatcagtac
agtgtctgtcacaataacagagaaacatccgtcacctcctcatctccatgtccacgctct
ggcagagcagcagtttacgtggacgttcctgctggaactctgtccttctatgaagtcgtc
tctgacagactgatccacctccacaccttcaacaccagcttctctgaacctctctgtgct
ggattttggctctactggtacatgtctgtgtctgggcccaggcctgtttcctcagtgtct
ctgtgtccagtttag
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