Cololabis saira (Pacific saury): 133424444
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Entry
133424444 CDS
T09849
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133424444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133424444
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133424444
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133424444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133424444
NCBI-ProteinID:
XP_061571048
LinkDB
All DBs
Position
23:complement(1791896..1833305)
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AA seq
531 aa
AA seq
DB search
MFGANRKKFMEGLDSDYPDDSSLYYSQQSIFPPHRPDKDMLASSSSSTSQLSQLGASLYG
PQSSLGFPMRGLNSSTAPQLSRTGLNPSAGPLSSHSSTPNSGSMHTSSSPSRSIMSMSSR
SVLNHNQQVGGAHGPDGPGGGTGGGRGGMGSPSRASPSIIGMPKQQQPRQPFTINSMSGF
GVNRNPGFNMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRRDGGSNPTPLLNPLAG
RAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQSKDPSSSSSTTDDSKTNLNSSGKST
SSSDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPIGMVTDQFGMIGLLTFIRAAET
DPGMVHLALGSDLTTLGLNLNSPENLYPKFSSPWASAPCRPQDIDFHVPSEYLTNIHIRD
KLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPSL
KTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaacaggaagaagttcatggaggggctggacagcgactacccggacgac
tccagcctctactacagccagcagtccatattccccccccaccggcccgacaaagacatg
ttggcgtcgtcctcctcctccaccagtcagctgtcccagctgggagccagtttatacgga
ccccagagttccctgggtttccccatgcggggcttgaacagttccacggcgccacagctg
agtcggaccgggctgaatccgtcggccgggcctctctccagtcacagcagcactcccaac
tccggcagcatgcacacgtcgtcctcgcccagcaggagcatcatgtccatgagcagccgc
tccgtgctgaaccacaaccagcaggtggggggggcccacgggccagacgggcctgggggg
gggaccggggggggccggggcggcatgggcagccccagcagggcgtcgccctccatcatc
ggcatgcccaagcagcagcagccgcggcagcccttcaccatcaacagcatgtcagggttc
ggggtgaacaggaatccaggtttcaacatgaacaactctttatccagcaacatcttcaac
ggcacagacggcagcgagaacgtgacggggttggacctgtccgacttcccggcgctggct
gaccggagtcggagagacggaggatccaaccccacgccgctgctcaacccgctggccggc
cgagcaccttacgttggcatggtaaccaaaccgtccagtgagcagtcgcaggacttctcc
atccacaacgaggacttcccagctcttcctggtcccaactaccagagcaaagaccccagc
agcagcagcagcaccaccgacgacagtaaaacgaacctgaactcctcaggaaaatccacc
tccagctcagacggacccaagtttcccggggacaagagctcggcgcccagcaacaacaac
cagcagaaaaaagggattcaggtgcttcctgacgggcgtgtgaccaacatccccatcggc
atggtaacggaccagttcgggatgatcggcttgttgacgttcatccgggcggcagagacg
gacccggggatggttcacctggcgctggggtcggacctgacgacgctggggctgaacctc
aactcacctgagaacctctaccccaagttttcgtctccctgggcgtcggcgccgtgtcgg
ccgcaggacatcgacttccacgtcccctcagagtatttaaccaacatccacatcagggac
aagctggcagccatcaagctgtcccggtacggggaggacctgctgttctacctctactac
atgaacggaggagacctgctgcagctgctggccgccgtagaactgttcaaccgggactgg
cggtaccacaaagaggagcgggtctggatcacgcgggccccggggatggagccgtcgctg
aagaccaacgcctacgagagggggacgtactacttctttgactgtctcaactggaggaag
gtggccaaggagttccatctggagtacgacaagctagaagagcgacctcacgttccctcc
accttcaactacaaccccgcccagcaggccttctga
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