Cololabis saira (Pacific saury): 133424494
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Entry
133424494 CDS
T09849
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133424494 (si:dkey-92j12.5)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
133424494
NCBI-ProteinID:
XP_061571170
LinkDB
All DBs
Position
1:17545559..17616201
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AA seq
1902 aa
AA seq
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MEIMDTQCALEAVERLQAKLKERGEAPTQEKLSLLKTVLQSPLFLHILSLQQAQRKPAAK
GKGIIKSVSMNCGPCPGLPLDMKTLSHSDSYTWAVENRGPGTARAFHKDGSFSSLGSQEL
SFSDIFPANATYTESQYCTPPRISRTMSMGRNLSALAQERRHIEIIELINDGKGLGFGII
GGRSAGIMVKTILPGGSAGRDNRLHSGDQILRIGDTDLAGMNSEQAAQVLRNAGSKVKLL
IARDVAKDNHVSSPVLYQESFDGEPSDLNDDHEFGVQFTKNSRGLGFTISSYVGDLNSVY
SVGVMVKSIVKGSSVDQDGRMHIGDIILSVDGLSLQGCSEQRAMEVLRRTGPLVRLKLLR
KAARLSHVLPPVRPLKPLRHSHSFHESSLSRTGLRKIQETDAFLCLQGVCSLREISRRAA
YASRRPQRDFREVVDLTPDEEETLRRRWQHAVGARYEVIVCQLKRFSETSGLGISLEARA
GHHYLCSILPEGPVGQSHKIFTGDQILEVNGRPLIGETHREVVSILKELPVFVCLVCSRI
VPPSVPDSDEENDADVHLSLKELLAEFNDKLDQGCVIPCPTAEDITKRGVPPMSPPLAMW
EKQAQVVELEKGDLGLGFSILDYQDPEDASKTVLIIRSLVPGGVADRDGRLLPGDRLVFV
NETDLEGSSLDYAVHVLKSTGYGPVHIGVAKPLPLELCGGLTPISERSARASCDDTDSHT
QVTLLAEAADASTTAVWNSDDNIFNQPGHTENQQHHHFGDMEDDNGQQAPPLPPRTSFER
TITVVRGNRSLGMSVSAINDGSGILVRTVVQGGSVCQDGRLGVGDIILAINGEPTSNMTS
VQARAVLRRHSVLGPEMRITYVPAHQVDEHRARLCLPPLASISTDSASSSPTLPASSPEP
ASASAGPPGPPAASKLRLSASVRFKAAAPGPATVRASASFKAPVRSSAAVPTITPTSDSS
WQNPKVLPHKSEKKENGRDTAWDSRDNVNSDVTTPKLDGEEEGDEERRSHTAMSWDQPKS
VRLTREPGQSLGISIMGGRGMGRRVSSGEMMRGVFIKHISPDSPATHNGSLRTGDRILEV
GGVDLRDATHEEAVEAIRSAGDSVVLLVHPGQYRPQTHTVIQHERQNPTPMFNSHNSKAP
SPTSDRMDRRSPINVTRPVKTAAGDGDDTSRKKMLQRYGSLTGKLHMIELEKDPAATGLG
ISLAANDDGSRARMSVNVAAIDPQGPVGLDGRIQVGDELLEINGQILYGRSHQNATTIIN
NAPSKVKIVLIRNKGGKSVKEIRGSYEDTVDSRPETVESGGLSRDVKHVVLPQDHLGLGL
CLEEDGSRTGVLVRSLIKHGIASKDGRIKVGDRIVAVGEEPVAGLSVEKVSGLILKHRVT
VKLSITPSQRPSFSSSLPPPALLSPLPAASSNVVQASTATSSSLSTAQTSPVEASVSLGT
CPTTPDPLSCSVVAGRETTVEICKGNLGLGLSIVGGCDTLLGAVIVHEVNDGGAAQRDGR
LQAGDQILEVNGIDLRQATHDEAIAVLRLTTQRVRLCVFRHQEAYREEDLWDVFSLELRP
RPAGGLGFTTVGKSNDTGIFVSDIIRGGAADSDGRLLLGDQILSINGEDVRAASQDRAQK
LLQCCSGAVHLEVARFKAGLQYSQQSQEFFKLCFIQSEDSDCSTLTPTSGCDVSFGHQRE
TQNRAGSYTIQNSKIRKVIIQKGPCGSLGLSVAGGMGSPHGNVPLFIAAMDTNGLAAKTQ
KIQTGDRILSINDVSTEGMTHDHAGALLKSATGNISLEVTASFDGCSTEVHSSLPDTSSG
RPGSLTCFHNNLGTRVYKTITLERGSLGLGFSIVGGFGSPHGDLPIYVKTIFDKGAAIED
GRLKRGDQIIAVNGRCLDGVTHPEAVDILKKTRGSVVLTVLS
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggagatcatggatactcagtgtgccttggaggccgtggagaggctgcaagccaaactg
aaggagagaggggaagcccccactcaggagaagctatccctgctgaagaccgtcctgcag
agccccctgttccttcatatactcagcctgcagcaagctcagcgcaagcccgctgccaag
gggaagggcatcattaagtctgtctccatgaactgcggcccatgcccgggtttacctctg
gacatgaagaccctcagccacagcgactcgtacacgtgggccgtggagaaccgagggccc
ggcaccgccagagccttccacaaggacggcagcttttcttctctaggctcccaggagctg
tctttctcagacatcttcccagccaacgccacgtacaccgaatctcagtactgcactcct
cctcgaatctcccgcaccatgtccatggggagaaacctttctgctcttgctcaagagagg
cgccacattgagataatagagctgatcaatgatgggaaaggacttggttttggcatcatc
gggggacggagcgccgggatcatggtcaagacgatcctccctggaggatcagctgggagg
gacaatcgtctacatagtggagatcagatcctgcgcattggagatacagatttagcagga
atgaacagcgagcaggcagcacaggtgctgcgaaatgctggtagcaaggtgaaactgctc
atcgccagggacgttgccaaggacaaccacgtctcctctcctgtcctctatcaggaaagc
ttcgatggcgagcccagcgacttgaatgatgaccacgagtttggtgttcagtttactaaa
aacagccggggcttgggctttaccatatccagctatgtaggagacctaaactcagtgtac
agtgttggcgtgatggtgaagagcatagtgaaaggcagctctgttgatcaagatggaaga
atgcacattggagatatcattctgtctgtggatgggttgagcctccagggctgcagcgag
cagcgggccatggaggtgctccggaggacgggtccgctggtcaggctgaagctgttgaga
aaagccgcccgcctgagccacgtcctgcccccggttcgccccctgaagcccctccgacac
tcccacagcttccatgaaagcagcctcagcagaacaggcctccgaaaaattcaagagaca
gacgcgttcctctgtctccaaggagtctgttcgctgcgtgaaatctcccggcgcgcggcg
tatgccagcagacgaccccagcgcgacttcagagaggtggtggatctgactccagacgaa
gaggaaactctaaggagaaggtggcagcatgctgtgggagcccgatacgaagtgattgtt
tgtcagctgaagcgattcagtgagacgagtggtctgggcatcagcttggaggcaagggca
gggcatcactatctgtgctccatcttacctgaggggcccgttggccaaagtcacaagatc
ttcactggagaccagatattggaggtaaatgggaggcctctcattggagagacacacaga
gaggtggtcagtattctgaaggagttgccagtgtttgtgtgtcttgtatgctctcgcatc
gtgcccccttcagtccctgacagtgatgaggaaaatgatgctgatgtccacctcagcctg
aaggagctgctggctgagttcaatgacaagctggatcagggctgtgtcattccatgtcct
acagccgaggacattaccaagcgtggtgtgccccccatgtcccctccccttgctatgtgg
gaaaaacaagctcaagtagttgagctcgagaaaggagatttgggactgggcttcagcatc
ctggactaccaggatccagaggatgcttctaaaacagttctgataatccgctccttggtg
cctggaggtgtagcagaccgagacggtcgtctcttacctggtgaccgactggtgttcgtg
aatgaaactgacctagaaggctccagtctggattatgctgtgcatgtcctgaagtccacc
ggctatggcccagtgcacatcggtgtcgctaaacccctgccgttggaactgtgtggcggc
ttgacgcccatctcggagaggagtgcccgggcttcatgtgacgacacggacagccacact
caggtcaccctgctagccgaggcagctgatgccagcaccaccgcggtgtggaactccgac
gacaacatcttcaaccagccgggtcacacggaaaaccagcagcaccatcactttggcgac
atggaagatgacaacgggcagcaagcgccacctctgcctcctcgcacaagctttgagagg
acaatcactgttgtccggggcaaccgtagccttgggatgtcggtcagtgctatcaacgat
ggctcaggcatactggtacgcactgtggtccagggaggctctgtttgccaggatggcagg
ctgggggtgggggacatcatcctagccatcaacggtgaacctacctccaacatgaccagc
gtccaagccagggccgtactccgccgacactctgtcttaggaccagaaatgaggataact
tacgtcccggcccatcaggtggacgaacaccgggctcgtctgtgcttgccgcctctggca
tccatctctactgacagcgcctcctcctcaccgactctaccagcttcttctcctgagccg
gcgtcggcctcagccggaccccccggccccccggctgcatccaaactcaggctgtcagcc
tcagtcagatttaaagccgcagctccgggtccggccacggtcagggcctccgcttcgttt
aaagctccagtcagaagctcggccgccgttcctaccatcaccccgacttcagactcaagt
tggcaaaatccaaaagttctacctcataagagtgagaaaaaagaaaatggcagagacacc
gcatgggattccagagacaatgtgaattcagatgtgacaacgccaaagttggatggggaa
gaagagggagatgaagagcgtcgatctcacacagcaatgtcttgggatcagcctaaaagt
gtgcggctgacccgagaaccaggccagtccctgggtatcagcattatgggaggcagaggc
atgggccgccgagtgagcagcggagagatgatgaggggtgtcttcatcaagcacatcagc
cccgacagcccggccacacataatggcagcctccggactggagacaggatactcgaggtg
ggcggtgtggacctaagagacgccacccacgaggaggcagtagaggccatccgcagcgcg
ggagactctgtggtcctcttggttcaccctggacagtacagacctcagacccatactgtc
atccagcatgaaagacaaaatccaacaccgatgttcaactcgcacaacagcaaggcacca
tcgccaacttccgatagaatggatcggagaagccccattaatgtcacaagaccagtaaag
acggcggctggagatggggatgacaccagccggaaaaagatgcttcagcgctatggcagt
ctgacagggaagctccacatgatagagctggagaaggaccctgcagctaccggtctgggc
atcagcctggcggccaacgacgacggctccagggcccggatgagcgtcaacgtggcagca
atcgaccctcaagggcctgtggggttggatgggcggatacaggttggggatgaactttta
gagattaatggccagatattgtatggccgaagtcaccaaaatgccaccaccatcatcaac
aacgctccatcaaaagtcaagatcgttctcatccgaaataaaggtggtaaatcggtcaag
gaaatcagaggaagttacgaggacacagttgactccaggccagaaactgtggagtctgga
ggattgtccagagatgtcaagcacgtcgtccttcctcaggatcatttaggtctgggtctt
tgccttgaagaagatggttccagaacaggagttttggtcagatccctgattaagcatggc
attgccagtaaggatggcaggataaaggttggagacagaatcgtggcagttggggaagaa
cctgtggctggactgtcggtggaaaaggtctccggtttgattctcaagcaccgggtcact
gtcaaactctccatcaccccttctcagcgtccttctttctcgtcctctctacctccccct
gcattactctcccctctgccggctgcttcctcaaacgttgttcaggcctccactgccacc
tcttcatctctcagtaccgcccagacatctccagtggaggcctccgtttcactcggcacc
tgtcccacaactcctgaccccttgagctgctccgttgtggctggaagggaaactaccgtc
gagatttgtaaaggaaatttaggcctaggcctcagcattgtaggaggatgcgacactcta
ctgggggcagtgatagtccatgaagtgaatgatggtggagcggcacagagagatggtcga
ctgcaagctggagaccaaatattagaggttaatggcatcgacctgcggcaggccacacat
gacgaggccatcgccgtgctgcggctcaccacccagcgtgttcggctctgcgtcttcagg
caccaggaggcctacagggaggaggacctgtgggacgtgttcagtctggagctcaggcct
cgtcctgcaggaggactgggctttaccactgtggggaagagcaatgacacaggaatcttt
gtgtcagacatcatcagaggaggagcagcagattcagacggcaggctgttgctcggggac
cagattctttcaatcaacggggaggacgtccgtgcagcatcgcaagatcgtgcacaaaag
cttctacagtgttgcagcggtgcagttcacctggaggtggcccgctttaaagccgggctg
cagtattcacagcagagtcaggaattctttaagttatgttttatccagagcgaagactcc
gattgttccactctgacgcccacaagtggatgcgatgtgtccttcggccaccagagggag
acacaaaacagagcaggaagttacactattcaaaactctaagatccgaaaagtaataata
caaaagggtccatgtggatctctgggcctcagtgtagccggaggaatgggcagtccccat
ggcaacgtacctctttttattgctgccatggataccaatggactggctgccaaaacacag
aaaatacagacaggagacaggatcctcagcatcaatgatgtgtctacagagggaatgact
catgaccacgccggagccctgctgaagagcgccaccggaaacatcagtctggaggtgaca
gcgagttttgatggatgcagcaccgaggttcacagcagcctgcctgacacatcatcgggc
cgacccggcagtctgacctgctttcacaacaacctgggtactcgcgtgtataagaccatc
accctggagagaggctcgctaggcctgggattcagcatcgtaggagggttcggcagccct
cacggagacctgccgatatacgtcaaaactatcttcgacaagggggcagccatagaggac
ggcaggctgaaacggggcgatcagatcatcgccgtgaatggacgctgcctggacggtgtc
acgcaccctgaagctgtggatatcctgaaaaagaccagaggaagtgtcgtcctcaccgtg
ctctcctga
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