KEGG   Cololabis saira (Pacific saury): 133424512
Entry
133424512         CDS       T09849                                 
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
  KO
K14791  periodic tryptophan protein 1
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csai03009]
    133424512 (pwp1)
Ribosome biogenesis [BR:csai03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    133424512 (pwp1)
  Pre-60S particles
   Other pre-60S particles
    133424512 (pwp1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR41 WD_LRWD1 Beta-prop_TEP1_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 133424512
NCBI-ProteinID: XP_061571161
LinkDB
Position
23:complement(18413393..18421447)
AA seq 493 aa
MSAQITCVGWVRRGVAKETPDKVELSQEELQRVIAETKQELGALTVEDEEEEDEGLPPDQ
SPSNDMDDVAQLPNDENDKREEEEDELAEYGLDKYDEDTVTANLGDSLAGLTVFGSNEED
PYITIKDTDQYEREDFQIKPSDNLILAGKADKDCCSLEVYVYNCDEESLYVHHDVLLPAY
PLCVEWLNFDPNPEEGRANYVAVGNMTPQIDVWDLDVVDCLEPVFSLGSKKASKKKKKSK
KAAAAEPVEGHTDAVLDLSWNKLVGNVLASASADDTVILWDLSQGKPATTLRRQTDKVQT
LKFHPFEAQTLISGSYDKTTVLYDCRSPDSNHRTWRFSGQVERLTWDHFSPCNFLASTED
GFVYCLDARSDKPVFTLRAHDEEVSGLELSSQIKGCLVTSSADKHVKIWDILGNKPSLVH
SRDMKMGVLFCASCCPDLPFAYAFGGQKEGLRVWDISDVAAVAEVFGSRERLVPNMGSQS
SSTAATADMEVAQ
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcgcccagatcacgtgtgtcggctgggtgagacgtggcgttgccaaggaaaccccg
gacaaggtggaattaagccaagaggagctgcagcgtgtgattgctgaaaccaaacaggag
ttgggagccctgacagttgaggatgaggaagaagaggatgagggcttgcctcctgaccag
agtcccagtaatgacatggatgatgttgcccaacttccaaacgatgaaaatgacaaaaga
gaggaagaggaggatgagttggcagagtatggcctggataaatatgatgaggatacagtg
accgctaatctcggtgacagcctggctggactaaccgtgttcggctccaatgaggaggat
ccttacatcaccatcaaagatacggaccagtatgaacgagaagacttccaaatcaaaccc
tctgacaacctgatcctggcgggcaaagcagacaaggactgctgcagtttagaggtttat
gtttacaactgtgatgaggagtctctgtatgtgcatcatgatgttctgctgccagcgtat
cctctgtgcgtggagtggcttaactttgacccaaaccctgaagaaggacgagcaaactat
gtggccgtgggcaacatgactcctcagatagacgtgtgggacctggatgtggtggactgt
ttagagccggtgttctccctcgggagcaaaaaggcttccaagaagaaaaagaaaagcaag
aaggctgcagcagccgagccggttgagggacacacagatgcggttctggacttatcctgg
aacaaactggttggaaacgtgctggccagtgcatctgcagatgacacggtcatcttgtgg
gatctgtctcaaggaaaaccagctacaactctccgaaggcaaaccgataaggtgcagaca
ttaaagttccatccgtttgaggcccagactttgatatcgggatcatacgacaaaaccaca
gtcctttatgactgcagaagtccagacagcaaccatcggacgtggaggttcagtggccaa
gtggaacgtctaacctgggaccacttttcaccctgcaacttcctggccagtactgaagat
ggctttgtctactgtctggatgcacgctcagataagccggtgttcacgctacgggcacac
gatgaagaagtgtcaggcttggaactcagcagccagattaaaggatgcctcgtcacctca
tcagctgacaaacatgttaaaatttgggacattttaggcaacaaacccagcctggtgcac
tctcgagatatgaaaatgggcgtgctgttctgtgcttcgtgttgccctgaccttcccttc
gcctatgccttcggaggacaaaaagaaggcttgcgggtttgggatatcagtgacgtcgca
gcagttgctgaagtgtttggcagtcgagagcggttagtgccaaatatgggatcgcagtca
tccagcacagcggccacagcagacatggaggtcgcccagtga

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