Cololabis saira (Pacific saury): 133424570
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Entry
133424570 CDS
T09849
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133424570 (si:dkey-159a18.1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Protocadherin
Motif
Other DBs
NCBI-GeneID:
133424570
NCBI-ProteinID:
XP_061571228
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Position
23:7861056..7895615
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AA seq
936 aa
AA seq
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MEFTLLKFFSIWNLVYMFFFLHGLTDGFGGLMYPPLERHWVEGTGELPPRARDHVTNHRS
PACGQPHLLTVHAPLNAALCSAHSHLQAPPTPTWPHLRASQGQVTHVSPLAISMTTVLLF
LLFPLLLLAPVDSSGASWGARAPPTPHRTPGAPGAPSRGLRPRRDTYSPPRGPAFTSCLL
PLTPEEHRVLDGSTHETGFNGDDGSYVILTWVGDGTGVILVLSTISGPLDSFLEGGSSRL
YRSTDYGKSFHDISHRINNTFIKEEFGVSVGPGSCVILTADTPIVDNPGGIVFTSRDAGA
TFKYTQLPFHLVQPITYHFLIPDYLVALSIDGGLWLSLDFGATWKEVHDGVNSFSWGAGI
NLFFSCNRVDAAEADERGDLVLKRTTDLGRTFTTIHEDVYSFGYIGAFLFFSVMEDPRSP
RVMYFSSDQGDDFSRALLPSASTEQFYSILDGDEDMLFMHVDNPGDTYFGTMYTSDDRGI
LFSRSLERHLFDGHRKSDFANITSLRGVYLTNKLDVDSRVRSVISFNRGGTWRQLHKPEN
VDCGDHVKSCNLHIHGEHSRNNRIVPMLALSAPTAIGLVIAHGSVGDSLSSSQNPDVFVS
SDGGYSWRGTLRGPHHYSILDSGGLIVAVEAHREGQVKTVKFSTDEGRCWKSYNFTEQPF
FFAGLASEPGTKAMNVSVWGFRPEDDGQPMWVAVTIDFQSLITRECDDSDYEEWLAHAAE
GAGSDREGCVLGVKETYRRLKKQSVCRNGRSFVVKKKQSPCLCTRDDYLCDYGYHRHVNT
SECVRQPSAANQTLEVCLSGQEDELLTEGYRKVPSDRCEGGFAPHLAVPTVIRPCGPKTS
PGPPARSTSSVTHFDTPRERLVLILVCGGAAAVVLVAVVSAVLAVRRVVYRTRTPSYRFS
NLRTQEDSSFVTPDLESAASSNGTAGQPDSDDDLLQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagttcacgctgctgaagtttttctccatctggaacctcgtgtacatgttcttcttc
ctccacggcctcaccgacggcttcggcggcctcatgtaccccccgctggagcgtcattgg
gtggaggggaccggagagctgccgccgcgagctagggaccacgtgactaaccacaggtca
cctgcatgcgggcagccgcacctgctgactgtgcacgcgccgctcaacgcagcactttgc
tccgcccactcccacctgcaggctcctcccactcccacctggcctcacctgcgcgcctca
cagggacaggtcacgcatgtttctccactcgccatcagtatgaccaccgtcctcctcttc
ctcctcttccccctcctcctcctggcacccgtggactccagcggggccagctggggggcc
agggcccctccgaccccccaccggaccccaggggccccgggggcccccagccggggcctc
cggccgcgtagggacacctacagtcccccccgcggtcctgccttcacctcctgcctcctt
cctctcaccccggaggagcaccgggtcctggacggcagcacccacgagacggggttcaac
ggcgacgacggctcctacgtcatcctcacctgggtgggcgacggcaccggagtgattctg
gtgctgtccaccatcagcggtccgctcgactccttcctggagggaggctcgtcgcgactc
taccgaagcacggactacggcaagtccttccacgacatctcgcaccgcatcaacaacacc
ttcatcaaggaggagttcggagtcagcgtcggaccgggaagctgcgtgatcctgacggcg
gacacgcccatcgtggacaacccgggcgggatcgtcttcacctccagagacgcaggcgcc
accttcaagtacacccagctgcccttccacctggtgcagccaatcacgtaccacttcctg
atccccgactacctggtggccctgagcatcgacggcggcctgtggctctcgctggacttc
ggcgccacgtggaaggaagttcacgacggagtcaactccttctcctggggcgccggcatc
aacctgttcttcagctgcaacagagtcgacgcagccgaggccgacgagcgtggagacctg
gtcctgaagaggaccacagacctgggccggaccttcaccaccatccacgaggacgtgtac
agcttcggctacatcggggccttcctcttcttctccgtgatggaggacccgaggtctcct
cgcgtcatgtacttctcctcggaccagggagacgacttcagccgagcgctgctgccgtcg
gcgtccaccgagcagttttactccatcctggacggggacgaggacatgctcttcatgcac
gtggacaaccccggagacacgtacttcgggaccatgtacacctcggacgaccgcgggatc
ctgttctccaggtccctggagcgccacctgttcgacggccaccggaagagcgacttcgcc
aacatcacgtcgctgcgaggcgtctacctcaccaacaagctggatgtggacagccgtgta
agatctgtcatttccttcaacagaggaggaacatggcggcagcttcacaaaccggagaac
gtggactgtggagaccacgttaagagctgcaacctgcacatccacggagaacacagccgg
aacaaccggatcgttcccatgctagctctgtcggcgcccaccgccatcggcctcgtcatc
gcccacggctccgtgggggattccctctcgtcatcgcagaatcccgacgtgtttgtgtcc
tcggacggcggctacagctggaggggcaccctgaggggcccccaccactacagcatcctg
gactcgggggggctcatcgtggccgtggaggcccaccgggagggacaggtcaagaccgtc
aagttctccactgacgaaggccggtgctggaagtcgtacaacttcacggagcagccgttc
ttcttcgcgggcctggcgtcggagccgggcaccaaggccatgaacgtcagcgtgtggggg
ttccggcccgaggacgacggccagcccatgtgggtcgccgtcaccatcgacttccagagc
ctcatcaccagagagtgtgacgacagcgactacgaggagtggttggctcatgctgccgag
ggggcgggctctgacagagaggggtgtgtcctgggcgtgaaggagacctatcggaggctg
aagaaacagtccgtgtgcaggaatgggcggagtttcgtggtgaaaaagaagcaaagcccg
tgcttgtgcacccgagacgactacctgtgcgactacggctaccaccgtcacgtcaacacc
tccgagtgcgtgaggcagccgagcgccgctaaccagactctggaggtttgcctgagcggg
caggaggacgagctgctgacggaaggctacaggaaggttcccagcgaccggtgcgagggc
ggattcgctcctcacctcgcggtgccgacggtcatccgaccctgcgggcccaaaaccagc
cccggtccgccggccaggtccacgtcttcggtcacacacttcgatacgccgagggagcgg
ctggtgctgatcctggtgtgtgggggggcggcggccgtcgtcctggtggccgtcgtgtcg
gccgtcctggccgtcaggagggtcgtttaccggaccaggactccgtcgtaccggttctcc
aacctccggactcaggaggacagcagcttcgtcacgcccgacctggagagtgcagccagc
agcaacggcacggccggccagccggactccgacgacgatcttcttcaatga
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