Cololabis saira (Pacific saury): 133424602
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Entry
133424602 CDS
T09849
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b isoform X1
KO
K05636
laminin, beta 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133424602 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133424602 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
133424602
NCBI-ProteinID:
XP_061571279
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All DBs
Position
23:complement(13869714..13905880)
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AA seq
1781 aa
AA seq
DB search
MWLIIFTLTTIGLWCPVRAQQEPQLPQFPDVCTEGSCYPATGDLLIGRAHKLSASSTCGT
HRPANFCIVGHLEEEKKCFSCDSRQMYDEVNNPISHTIENVVTTFAPNRLKTWWQSENGV
ENVTIQLNLEAEFHFTHLIMTFKTFRPGAMMIERSMDFGKTWQVYRYFSQNCESSFPGIS
TGPMVRVDDIICDSHYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNIRVKFV
KLHTLGDNLLDSREEVTEKYYYALYDLVVRGNCFCYGHASECAPIDGEPSSAEGMVHGRC
VCNHNTEGLNCEHCQSFYHDLPWRPAEGRNTHSCKQCECNHHTSSCHFDLAVYMSTGNAS
GGVCDDCQHNTVGRQCEQCAPFFYQHPNRDLRDPSICEPCNCDPNGSQQGGMCDPRTDVA
RGLISGQCRCKANVEGERCDHCRQGHYGVGQGPDGCLACTCNPLGTLPGGNPCDSNSGRC
YCKRLVDGHNCDQCLPQHWGLTHDMDGCRPCDCDQGGAVDNNCDAQTGQCTCREHMFGRR
CDKVESGFYFIALDHYIYEAEDAKHGPGVTVVQRPYPLDRSPTWTGMGFVNVPEGAYLEF
NVNDVPESMDYNILIRYEPQLPQQWEQVNMRVERPVFQPPSHFGHCSNSIQSGDDQSISL
PPGSRHVMLVTPVCFEKGLNYTVRLTLPLYSSDSHIQSPYTLIDSLVLMPRVREMDMFHG
LEGEEAWDTFQRYRCLESSQSVVKSPMTDICNDYIFSVSALLHQGAMACHCDPQGSLSSL
CDPSGGQCRCRPNVVGRNCDHCAPATFLFSPAGCTPCNCDPLGSVHAFCHEATGQCECSS
GVLGRQCTHCRPGFWGFPQCRPCHCNGHSEYCHPQTGECQGCRDYTTGQHCERCLGGYHG
NPELGSGGRCRPCMCPDGPRSGRQFSDSCYVLPHTNELVCVCSPGYKGARCEECAPGHYG
NPLVPGGQCMPCQCNNNINMHDPESCDARTGACVKCLHYTQGYACQSCKPGYYGNAATQS
CRKCVCFPAGTAPHACSSPTECQCDQRSGLCPCQPNVVGQSCDRCAPDTWDIASGSGCRR
CDCDPVHSLGSSCDEATGQCVCRPGFGGRTCRECKELFWGDPEVKCHACDCDRRGISSDQ
CHRATGQCTCVEGASGPRCDQCARGYEGTFPACQPCHQCFAVWDTVVGELTNQSRRLERQ
VTELLTSGVTAPYKELVVSLERNAKAVREIVENKTATVKLEQIQDLMHQITGLMSYVSGK
LNTTEEGLTLLHYASNTTGENVDTLINEANHLERKVQELRQEVHNAKNANIYGAMNTIST
AHMESSNAEFRCKASTSDPGNTVEQSAAMRKATEDKLSGSQKEFDRKNQRNTQKLDKLSK
ELDKSDLSSLNEKICGSAAKGEDCSPCGGLGCGGDEGPQCGGEGCGGLVTTSQEALQSAK
NLDQQIQDAMQEVDKLSRMVWEANIRANEAKANAMQVLIKSNQSKERVEQSNEQFRNLIK
DIRDLLNNEKADASVIEAVANEVLALDMPTSAERLQELTNEIREKVSTLSNVETILSQSA
DDVQVAEALLKQAKMASDETSNMKEKADTVREAQDETERAQNNATDAIQLAQNNTRGTLD
LLLSVESDTARSELKLSNTTGRLLQLEREVGLLRQNDLEVNKLATTAEQITEQATQNADK
AHEEFKEEVIDKFEEVKEQVEDKGESVLQARRKADQLQQEAKELLVQSSTKLEKLGELEK
SYQINQGVLEEKAGQLVELEQTVRRILDEISQKVTLYSTCV
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcataatcttcactttaactactattggtctgtggtgtcctgtcagggcgcag
caggagccacagttaccacagtttccagatgtgtgcacagagggcagctgttacccagct
acaggagacctgctgatcggcagggcacacaagctctccgcctcctccacctgtggcacc
caccgcccggccaacttctgcatcgttgggcaccttgaggaggagaagaaatgcttttcg
tgcgactcaaggcagatgtacgatgaggtcaacaaccccatcagccacaccatcgagaac
gtggtcaccaccttcgccccgaaccgcctcaagacctggtggcagtcggaaaacggtgtg
gagaatgtgacgatccagctgaaccttgaggccgagtttcatttcacacaccttatcatg
accttcaagacgtttcgtcctggtgccatgatgatcgagcggtccatggattttggaaaa
acgtggcaggtttatcgctacttttcccaaaattgcgagtcatccttcccgggaatttcc
acaggacccatggtcagagtggacgacatcatctgtgactcccattactcagacatcgaa
ccatccacggagggagaggtgatatttcgagtgctggaccctgcctttgagatcgaggat
ccctacagcttgaggatacagaacatgctaaagatcaccaacatcagagtgaagttcgtc
aagctccacacgctgggcgacaacctgctggactcccgcgaagaggtgacggagaagtac
tactacgccctctacgacctggtcgtccgggggaactgcttctgctacggccacgcctcc
gagtgcgcccccatcgatggagaaccgagttctgctgagggcatggttcacggtcgctgc
gtgtgcaaccacaacacggagggactgaactgcgagcattgtcagagcttttaccacgac
ttgccttggagacctgcagaaggacgaaacacccactcctgcaagcagtgcgagtgtaac
catcacacctcatcgtgtcactttgacctcgctgtatacatgtcgaccggcaacgccagc
ggaggcgtttgtgatgactgccaacacaacacggtgggccggcagtgcgagcagtgtgcc
cctttcttctaccagcaccccaacagagacctgagagaccccagcatctgcgaaccgtgc
aactgtgacccgaacgggtctcagcagggcggcatgtgtgacccccggaccgatgtggcc
agagggctgatctcaggtcagtgtcggtgcaaagccaacgtggagggagagcggtgcgac
cactgcagacagggacactacggagtgggacaaggcccagacggctgcctggcgtgtacc
tgtaacccgctgggaacgttgccgggaggaaacccctgcgactccaactcaggaagatgc
tactgcaaacggctcgtggacggacacaactgcgaccagtgtctgccacagcactggggt
ctgacgcatgacatggacgggtgccggccatgtgactgcgaccagggaggggctgttgac
aataactgtgacgctcagacaggccagtgtacgtgcagagagcacatgtttggacgccgc
tgcgataaggtggagtccggcttctacttcatcgctctggatcactacatctacgaagcc
gaggacgccaagcacggacccggcgtgacagtggtgcagaggccttatcctctggaccga
agccccacgtggactgggatgggcttcgttaatgtgccggaaggagcgtatctggagttc
aacgtcaacgacgtcccggagtccatggattataacattctgatacgctatgagccgcag
ctgccgcagcagtgggagcaggtgaacatgcgcgtggagcggcccgtcttccagcctcca
agccacttcggtcactgcagcaactccatccagagcggggatgaccagagcatctctctt
ccacctggatccagacacgtgatgctggtgacgccggtgtgcttcgagaagggcctgaac
tacaccgtccgactcactctgccgctgtactcgtctgacagccacatccagagtccgtac
acactcatcgactcgttggtgctgatgccccgagtcagagagatggacatgtttcatggg
ctggaaggtgaagaagcttgggataccttccagcgctaccgatgtctggagagcagccag
agcgtcgtcaaaagccccatgaccgacatctgcaacgactacatcttcagcgtctctgcc
ctgctgcaccaaggagccatggcatgccactgtgaccctcagggttccctcagcagcctc
tgcgacccaagtggtggacagtgcagatgtcgacccaacgtcgtgggcaggaactgcgac
cactgtgctccggccacgttcctgttcagccccgccggatgcacaccctgcaattgtgac
cctctgggctcggtccacgccttctgccacgaggccaccggccagtgcgagtgctcctcg
ggagttctgggtcgccagtgcacccactgccggcccgggttctggggcttccctcagtgc
cgaccgtgccactgcaacggccacagcgagtactgccaccctcagaccggggagtgtcag
ggctgcagggattacaccacaggacagcactgtgagaggtgtctcggcggttaccatggt
aaccccgagctgggctcaggtggccgctgtcgcccttgcatgtgtccggacggcccgcga
agcggcaggcagttttcagacagctgttacgtcttaccccacaccaacgagctggtgtgt
gtgtgcagccccggctacaaaggcgccaggtgtgaggagtgcgccccgggccattatgga
aacccactggttcctggaggtcaatgcatgccctgccagtgcaacaacaacatcaacatg
cacgaccccgagtcctgcgacgctcgcacgggggcctgtgttaaatgcctgcactacacc
cagggctacgcatgccagagctgcaaaccgggttactacggcaacgctgccacacagagc
tgcaggaagtgcgtgtgtttccccgcgggaacggcgcctcacgcctgctcgtcccccacc
gagtgtcagtgcgaccagcgcagcgggctgtgtccctgccagcccaacgtggtgggccag
agctgtgaccgctgcgctcccgacacctgggatatcgccagcggctcgggctgccggcgc
tgcgactgcgaccccgtccactccctcgggtcctcttgcgatgaggcgacaggacagtgt
gtgtgcagaccaggtttcggtggcaggacctgccgtgagtgcaaggagcttttctggggg
gatccagaggtcaaatgccacgcctgtgactgcgaccggcggggaatctccagcgaccag
tgtcaccgcgccaccggccagtgtacctgcgtggagggagcgtcgggcccgcgctgcgac
cagtgtgcccggggctacgagggaacgttcccggcctgtcaaccctgccaccagtgcttt
gcagtgtgggacaccgtggtgggcgagctcaccaatcagagccggcgtctggagaggcaa
gtgactgaacttctgaccagcggggtgacggccccctataaggagttggtcgtctctctg
gagagaaacgccaaggctgtcagggaaatcgtggagaacaagaccgcaacagtaaagctg
gagcaaatccaagatctgatgcatcagataactggtttgatgtcctacgtcagtggaaag
ctaaacacaaccgaagagggcttgacgcttctccattacgccagcaacaccacaggggaa
aacgtagatactctgattaatgaggcgaaccatctggagagaaaggtccaggagctgaga
caggaggtgcataatgccaaaaatgccaacatctacggtgccatgaacaccatttctaca
gcgcacatggagtccagtaacgcagagttccgctgcaaagcctccaccagcgatcctggc
aacacggtggagcagtccgccgccatgaggaaagccaccgaggacaaactgagcggaagt
cagaaggagttcgacagaaagaatcaaagaaacacacagaagctggacaagctgtccaaa
gagcttgataaatctgacctgtcttcactcaacgagaagatatgtggcagtgcagccaag
ggtgaggactgctccccgtgtggcggtctgggctgtgggggggatgaggggcctcagtgt
ggaggagagggctgcggtggcctggtcacaacctctcaggaagctctgcagtctgccaag
aacctggaccagcaaatccaagacgctatgcaggaggtggacaaactgtccaggatggtg
tgggaagccaacatccgtgcaaacgaggccaaggcgaacgccatgcaggtgctgatcaaa
tccaaccaaagcaaagagcgagtggagcagagcaacgagcagttccgcaacctcatcaaa
gacatacgagacctcctcaacaatgagaaggcggatgcgtccgtgattgaggccgttgcc
aacgaggtgctggctctggatatgccgacctctgcggagaggttgcaggagctgaccaat
gagatcagggagaaggtgagcaccctgagcaacgtggagacaatcctcagtcagagtgcc
gacgacgtccaagttgcagaagctctcctgaagcaagccaagatggccagtgacgagacg
tccaacatgaaggagaaagcagacacagtgagagaggcccaggatgagactgagcgtgct
cagaacaacgccaccgacgccatccagctggcccagaacaacacgaggggaacgctggac
ctgctgctctctgtggagtcggacacagccaggtcggagctgaagctcagcaacaccacc
ggccgtctgctgcagctggagagggaggtcggcctgctgaggcagaacgacctggaggtg
aacaagctggcgacgacggcggagcagatcaccgaacaggccacgcagaacgccgataag
gcccatgaggagttcaaagaggaggtcatagataaatttgaggaggttaaggagcaggtg
gaagataaaggggaatcggtgctgcaggcgaggaggaaagcggatcaactgcagcaggaa
gctaaagagctactcgtgcagagcagcaccaagctggagaaactcggagagttggagaag
tcgtaccagatcaaccagggcgtcctggaggagaaagccggacagctggtcgagctggag
caaaccgtccgtcgcatccttgatgagatcagccagaaagtgacgctttacagcacttgt
gtgtga
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