KEGG   Cololabis saira (Pacific saury): 133424843
Entry
133424843         CDS       T09849                                 
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
  KO
K18681  DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133424843 (dis3l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133424843 (dis3l)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     133424843 (dis3l)
SSDB
Motif
Pfam: RNB OB_Dis3 Rrp44_CSD1 CSD2 Rrp44_S1 OB_HELZ2
Other DBs
NCBI-GeneID: 133424843
NCBI-ProteinID: XP_061571365
LinkDB
Position
3:4973082..5026123
AA seq 1048 aa
MIKTEKVVHLRSGRGRRVRVVREHYLRERVPCFSALCQADCNNDGPVLPGDLTHYVVPDA
EVVVNFLEILELRELQGIVFTQTAVQALQSRGRRCYNRLRSLVKDPRHDCVLFANEFQEF
CFCPREEGERQERWQTRSVYSAAVWYYNHLAGVMNVVMITEDQEAVAQYSSLNSGVFVVT
VQDYLQNFWPDLVQAQDLYRSISQVLQDKEGEDTQREFSEHLPPEVLESGIKSGRFLQGS
LNVSKHRASDQAFVVNQVLSSKNTDLSGGVLVYGFKNRNRAVHGDSVVLELLPRSQWRGR
LTALAEGPGTETGEDGEGRPVPTGRVVGILQRNWRDYVVTFPSRDGSQSQTRNSQRILAI
PWDRRIPKIRISTQQAETLQDHRVVVRIDSWEITSLYPNGHSVRVLGRAGELETEVQTIL
IENGIHVPPFSDAQLREMPPNSPEKPWSVDPAQAGRRRDLRDQLVFSIDPPGCQDVDDTL
SVRRLAGGKLELGVHIADVTHFVREGSLTDLEARTRATTYYLADRRYDMLPAVLSADLCS
LLGGMDRYAMSVLWELDAGSLAVSSVWFGRTLVRSSYQLHYELAQALLDGEEAPVPELAQ
LGPEERDAKLAELLEALEMLTQVARHLRAQRDQGGALELEGVEVRAQLDQDRNITALVPR
QPLEVHETVAECMIYANHWVARRIQEAFPSTALLRRHPPPCQELFTQLVDLAQARGFPMN
TRTNKDLADSLERAADPQDPLVNRLLRMMATQAMSQAQYFCTGSQPQDQYYHYGLALDRY
THFTSPIRRYADVVVHRLLTAALELEGGAAPAPARALGGNKEMEETAQHINNKNRAAQRA
QNLSTGLFQCLFFKDRDPQTDPRCLADAIIYAVRDNGVLVFVPEYGVKGPVYLRNREGQV
VSAGPDGGCEWLSGSVRRHPDQISTCSNGGSCTFRLLDHVTVCISVLSTSCHPDTLKLEL
VSNRPHHSGAAPRPAPAPGRNQLVQEVVRLAQEAQQAQNQAQQRPRLSREEREFQQSKTP
NLYSLLEEVRELALLDQDSLLRAAAATA
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgattaagacggagaaggtggtgcacctgaggagcggccggggccgcagggtccgggtg
gtgcgggaacattacctgcgggagcgggtcccgtgcttcagcgcgctgtgccaggcggac
tgcaacaacgacggtccggttctacccggagaccttacccactacgtggttccggatgcc
gaggtggtggtgaacttcctggagatcctggagctcagggagctgcagggcatcgtgttc
acgcagaccgccgtccaggccctgcagagccggggacgcaggtgctacaaccgactccgg
agcctcgtcaaagacccccgacacgactgcgtgctgtttgctaacgagttccaggagttc
tgcttctgtccgcgggaggaaggcgagcggcaggagcgctggcagaccaggagtgtgtac
tcggctgcggtgtggtactacaaccacctggcaggtgtgatgaacgtggtgatgatcacg
gaggaccaggaggccgtggctcagtacagcagcctgaactcgggggtgttcgtcgtcacc
gtgcaggactacctccagaacttctggccggaccttgtccaggcccaggacctgtaccgg
tccatctcccaggtcctgcaggacaaggagggggaggacacccagagggagttctccgag
cacctgccccccgaggtcctggagtccggcattaagtccggacgcttcctgcagggcagc
ctgaacgtcagcaagcaccgagcctcggaccaggccttcgtggtgaaccaggtcctgtcc
agcaagaacaccgacctgagtggaggcgtgctggtctacggcttcaagaaccggaaccgg
gccgtccacggagactcggtggtgctggagctgctgccccggagccagtggagggggagg
ctgacggcgctggccgagggaccggggacagagaccggcgaggacggggagggcagaccc
gtcccaacaggccgcgtggtggggatcctgcagaggaactggagggactacgtggtgacc
ttccccagcagggacgggtctcagtcacagaccaggaactcccagcggatcctggcgatc
ccctgggaccgccgcatccccaagatccggatcagcacccagcaggccgaaacgctgcag
gaccacagggtggtggtgcgcatcgactcctgggagatcacctcgctctaccccaacggc
cacagcgtgcgggtcctgggtcgggccggagagctggagaccgaggtccagaccatcctc
atcgagaacggcatccacgtgccccctttctcagacgctcagctgagggagatgccgccc
aactccccggagaagccgtggtcggtggacccggcccaggcggggcgacgccgggacctc
agggaccagctggtgttcagcatcgacccgccgggctgccaggacgtggacgacacgctg
tcggtgcggcgcctggcgggggggaagctggagctgggggtccacatcgctgacgtcacc
cacttcgtcagggaggggtccctcacggacctggaggcccggaccagggccaccacctac
tacctggccgaccgccgctacgacatgctgcctgccgtcctgagtgcagacctgtgctcc
ctgctggggggaatggaccggtatgccatgagcgtcctgtgggagctggatgctgggtcc
ctggccgtcagcagcgtctggttcggccggacactggtccggtcctcctaccagctccac
tatgagctggcccaggcgctgctggacggggaggaggccccggtaccggagctggcccag
ctcggcccggaggagagggacgccaagctggccgagctgctggaggcgctggagatgctg
acccaggtggcccggcacctgcgggcccagagggaccaggggggtgccctggagctggag
ggggtggaggtgcgggcccagctggaccaggacaggaacatcacggccctggtaccccgc
cagcccctggaggtccacgagacggtggccgagtgcatgatctacgccaaccactgggtg
gcccgcaggatccaggaggccttcccctccacagcgctgctgaggcgccacccgccgccc
tgccaggagctgttcacccagctggtggacctggcccaggcccggggcttccccatgaac
accaggaccaacaaggacctggcggactctctggagcgggcggcggacccccaggacccg
ctggtgaaccggctgctccggatgatggccacccaggccatgtcccaggcccagtacttc
tgcaccgggtcccagccccaggaccagtactaccactacggtctggctctggaccgctac
actcacttcacctctcccatccgccgctacgccgatgtggtggtgcaccgcctcctgacg
gcagcgctggagctggaggggggggcggccccggccccggcccgggccctgggcgggaac
aaagagatggaggaaacggctcagcacatcaacaacaagaaccgggcggcccagcgggcc
cagaacctgtccaccgggttgttccagtgtcttttcttcaaggacagagatcctcagacg
gacccgcgctgcctggccgacgccatcatctacgccgtccgggacaacggagtcctggtc
ttcgtcccagagtacggggtgaagggtccggtctacctgaggaacagggagggccaggtg
gtgtcagcagggccggacggcggctgtgaatggctgagcggctcggtacgtcgccatcca
gaccaaatcagcacctgctccaacggcggcagctgcaccttcaggctgttggaccacgtc
acggtctgcatctctgtcctctccaccagctgccaccctgacaccctgaagctggagctg
gtcagcaaccggccgcaccacagcggcgcggcgccccggcccgcgccggcaccgggccgg
aaccagctggtccaggaggtggtccggctggcccaggaggcccagcaggcccagaaccag
gcccaacagaggccccggctatccagggaggagagggagttccagcagagcaagaccccc
aacctgtactccctcctggaggaggtccgggagctggccctgctggaccaggactcgctg
ctaagggccgccgccgccacggcgtag

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