Cololabis saira (Pacific saury): 133424843
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Entry
133424843 CDS
T09849
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133424843 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133424843 (dis3l)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
133424843 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
133424843
NCBI-ProteinID:
XP_061571365
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All DBs
Position
3:4973082..5026123
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AA seq
1048 aa
AA seq
DB search
MIKTEKVVHLRSGRGRRVRVVREHYLRERVPCFSALCQADCNNDGPVLPGDLTHYVVPDA
EVVVNFLEILELRELQGIVFTQTAVQALQSRGRRCYNRLRSLVKDPRHDCVLFANEFQEF
CFCPREEGERQERWQTRSVYSAAVWYYNHLAGVMNVVMITEDQEAVAQYSSLNSGVFVVT
VQDYLQNFWPDLVQAQDLYRSISQVLQDKEGEDTQREFSEHLPPEVLESGIKSGRFLQGS
LNVSKHRASDQAFVVNQVLSSKNTDLSGGVLVYGFKNRNRAVHGDSVVLELLPRSQWRGR
LTALAEGPGTETGEDGEGRPVPTGRVVGILQRNWRDYVVTFPSRDGSQSQTRNSQRILAI
PWDRRIPKIRISTQQAETLQDHRVVVRIDSWEITSLYPNGHSVRVLGRAGELETEVQTIL
IENGIHVPPFSDAQLREMPPNSPEKPWSVDPAQAGRRRDLRDQLVFSIDPPGCQDVDDTL
SVRRLAGGKLELGVHIADVTHFVREGSLTDLEARTRATTYYLADRRYDMLPAVLSADLCS
LLGGMDRYAMSVLWELDAGSLAVSSVWFGRTLVRSSYQLHYELAQALLDGEEAPVPELAQ
LGPEERDAKLAELLEALEMLTQVARHLRAQRDQGGALELEGVEVRAQLDQDRNITALVPR
QPLEVHETVAECMIYANHWVARRIQEAFPSTALLRRHPPPCQELFTQLVDLAQARGFPMN
TRTNKDLADSLERAADPQDPLVNRLLRMMATQAMSQAQYFCTGSQPQDQYYHYGLALDRY
THFTSPIRRYADVVVHRLLTAALELEGGAAPAPARALGGNKEMEETAQHINNKNRAAQRA
QNLSTGLFQCLFFKDRDPQTDPRCLADAIIYAVRDNGVLVFVPEYGVKGPVYLRNREGQV
VSAGPDGGCEWLSGSVRRHPDQISTCSNGGSCTFRLLDHVTVCISVLSTSCHPDTLKLEL
VSNRPHHSGAAPRPAPAPGRNQLVQEVVRLAQEAQQAQNQAQQRPRLSREEREFQQSKTP
NLYSLLEEVRELALLDQDSLLRAAAATA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgattaagacggagaaggtggtgcacctgaggagcggccggggccgcagggtccgggtg
gtgcgggaacattacctgcgggagcgggtcccgtgcttcagcgcgctgtgccaggcggac
tgcaacaacgacggtccggttctacccggagaccttacccactacgtggttccggatgcc
gaggtggtggtgaacttcctggagatcctggagctcagggagctgcagggcatcgtgttc
acgcagaccgccgtccaggccctgcagagccggggacgcaggtgctacaaccgactccgg
agcctcgtcaaagacccccgacacgactgcgtgctgtttgctaacgagttccaggagttc
tgcttctgtccgcgggaggaaggcgagcggcaggagcgctggcagaccaggagtgtgtac
tcggctgcggtgtggtactacaaccacctggcaggtgtgatgaacgtggtgatgatcacg
gaggaccaggaggccgtggctcagtacagcagcctgaactcgggggtgttcgtcgtcacc
gtgcaggactacctccagaacttctggccggaccttgtccaggcccaggacctgtaccgg
tccatctcccaggtcctgcaggacaaggagggggaggacacccagagggagttctccgag
cacctgccccccgaggtcctggagtccggcattaagtccggacgcttcctgcagggcagc
ctgaacgtcagcaagcaccgagcctcggaccaggccttcgtggtgaaccaggtcctgtcc
agcaagaacaccgacctgagtggaggcgtgctggtctacggcttcaagaaccggaaccgg
gccgtccacggagactcggtggtgctggagctgctgccccggagccagtggagggggagg
ctgacggcgctggccgagggaccggggacagagaccggcgaggacggggagggcagaccc
gtcccaacaggccgcgtggtggggatcctgcagaggaactggagggactacgtggtgacc
ttccccagcagggacgggtctcagtcacagaccaggaactcccagcggatcctggcgatc
ccctgggaccgccgcatccccaagatccggatcagcacccagcaggccgaaacgctgcag
gaccacagggtggtggtgcgcatcgactcctgggagatcacctcgctctaccccaacggc
cacagcgtgcgggtcctgggtcgggccggagagctggagaccgaggtccagaccatcctc
atcgagaacggcatccacgtgccccctttctcagacgctcagctgagggagatgccgccc
aactccccggagaagccgtggtcggtggacccggcccaggcggggcgacgccgggacctc
agggaccagctggtgttcagcatcgacccgccgggctgccaggacgtggacgacacgctg
tcggtgcggcgcctggcgggggggaagctggagctgggggtccacatcgctgacgtcacc
cacttcgtcagggaggggtccctcacggacctggaggcccggaccagggccaccacctac
tacctggccgaccgccgctacgacatgctgcctgccgtcctgagtgcagacctgtgctcc
ctgctggggggaatggaccggtatgccatgagcgtcctgtgggagctggatgctgggtcc
ctggccgtcagcagcgtctggttcggccggacactggtccggtcctcctaccagctccac
tatgagctggcccaggcgctgctggacggggaggaggccccggtaccggagctggcccag
ctcggcccggaggagagggacgccaagctggccgagctgctggaggcgctggagatgctg
acccaggtggcccggcacctgcgggcccagagggaccaggggggtgccctggagctggag
ggggtggaggtgcgggcccagctggaccaggacaggaacatcacggccctggtaccccgc
cagcccctggaggtccacgagacggtggccgagtgcatgatctacgccaaccactgggtg
gcccgcaggatccaggaggccttcccctccacagcgctgctgaggcgccacccgccgccc
tgccaggagctgttcacccagctggtggacctggcccaggcccggggcttccccatgaac
accaggaccaacaaggacctggcggactctctggagcgggcggcggacccccaggacccg
ctggtgaaccggctgctccggatgatggccacccaggccatgtcccaggcccagtacttc
tgcaccgggtcccagccccaggaccagtactaccactacggtctggctctggaccgctac
actcacttcacctctcccatccgccgctacgccgatgtggtggtgcaccgcctcctgacg
gcagcgctggagctggaggggggggcggccccggccccggcccgggccctgggcgggaac
aaagagatggaggaaacggctcagcacatcaacaacaagaaccgggcggcccagcgggcc
cagaacctgtccaccgggttgttccagtgtcttttcttcaaggacagagatcctcagacg
gacccgcgctgcctggccgacgccatcatctacgccgtccgggacaacggagtcctggtc
ttcgtcccagagtacggggtgaagggtccggtctacctgaggaacagggagggccaggtg
gtgtcagcagggccggacggcggctgtgaatggctgagcggctcggtacgtcgccatcca
gaccaaatcagcacctgctccaacggcggcagctgcaccttcaggctgttggaccacgtc
acggtctgcatctctgtcctctccaccagctgccaccctgacaccctgaagctggagctg
gtcagcaaccggccgcaccacagcggcgcggcgccccggcccgcgccggcaccgggccgg
aaccagctggtccaggaggtggtccggctggcccaggaggcccagcaggcccagaaccag
gcccaacagaggccccggctatccagggaggagagggagttccagcagagcaagaccccc
aacctgtactccctcctggaggaggtccgggagctggccctgctggaccaggactcgctg
ctaagggccgccgccgccacggcgtag
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