Cololabis saira (Pacific saury): 133424853
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Entry
133424853 CDS
T09849
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133424853 (ascc3)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133424853 (ascc3)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
133424853 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
IstB_IS21
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
133424853
NCBI-ProteinID:
XP_061571378
LinkDB
All DBs
Position
3:complement(3843370..4120766)
Genome browser
AA seq
2204 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKKEDLYDQLYDLKAKRLKRQELFAKEGLTWQKIVHFCTEDRDK
AEQQAASQELKSLLLAAKQIVGAEHGQEAIESAAVFLFDTFHNKDHVGTEETRAIKHMFG
LFPSSAAETSCACVARLVAPVAESKLQDFIQTQSSRHKPERGSTFGRNIAFSFDCYTLEP
LEDLPGSGDPDESGKLDFINFINNQQSGKKRAGEDVLSSGRSLSSGDESILQSEVEKYLD
GGNMISSNPEELCTSLFEMLTSHRSDDELQNELFELLGPEGLEMISTLLQRRGAIVDSFL
CTPADRTGYAADAGRKFSSEVTKPAFGCQVTIQSEKEKQMMKMYRREEKKEKKRGKGTDD
GDSSDAALTFEPREMRAQREHALLNARVEPVLTRERVYERVRYPNVYDNYAEATTAPAFV
GGARMLLPEGIHRENNKMYEEVEIPPNEPMAVGFDEKPVLISDLDQVGQLVFKGMKRLNR
IQSLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKIVYVAP
MKALAAEMTNYFSKRLEPLGISVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVA
SFLHVNPYIGLFYFDSRFRPVPLGQTFVGIKTTNKIQQIHDIEEVCYNKVLAQVKAGHQV
MVFVHARNATVRTAMGLIELAKNHGETCFFQPDQGPDYGQCEKQIQRSRNKQMREIFPEG
FGIHHAGMLRSDRSLMESMFSKGHVKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGAF
VDLGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFLSSLADNL
NAEVALGTVTNVEEAVKWLSYTYLYVRMRANPLVYGINYQAFQMDPTLALYRKELVLESG
RKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTIETFNELFNSQRTEADILSIVSKA
EEFDQLKVREEEMEEMEQMLCNYCELPVTGGVENGYGKVNILLQTYIGRGEVDSFSLISD
VSYVAQNAARIVRALFEVALRKRWPAMTYRLLTLCKVIDKRLWGFAHPLRQFPHLSHIVL
NRLEEKRLTLDKLKEMRKDEIGHMLHHVNVGLSIKQCVHQIPSVTMEASIQPITRTVLRV
RLVITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTAEPQHVVFTIP
IFEPLPSQYYIKVVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGSPEY
ESLYKFSHFNPIQTQIFHTLYHSDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPGAKVVYI
APLKALVRERIEDWKVRIEEKLGKRVVELTGDVTPDMRAIANADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANARD
LADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPV
LIFVSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIATVRDSNLKLTLAFGIGM
HHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAE
IAAGTISSKQDAMDYITWTYFFRRLVMNPSYYNLEDISHESINKYLSTLVERSLRDLECS
YCIEIKEDDRTIEPLTYGRIASYYYLKHQTICLFKERLKAELSVHELLSVLTDAEEYAEL
PVRHNEDQLNSQLAQQLPLQVNPRSFDSAHTKTHLLLQAHFSHAALPCSDYTTDTKTVLD
NAIRICQAMLDVAANEGWLVTAISICNLVQMIVQGRWLHDSSLLTLPHVEQQDLYLFRKW
ADKKVKGNAPGFSGAVEGLPELIASCGGKEGVFSAMLSPTLHPNQIAQAWGFLSHLPVLE
VQLSLKGWWEDGREQGERRLPAAATSLREQSSWLDVHADQEYVLQVALRRVNVGQQRRKQ
DSKAQAPRFPKNKDEGWFLVVGEVDRRELLAVKRIGFVRNHTAVSVAFYTPERTGKCIYT
LYLLSDSYLGLDQQYDIHLNVTPASIAAQVNTEVAGSTSGVSLS
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccacgcctcacaggtgcacttcgttccttctccaacgtcagcaagaaggag
gacctttatgatcagctctacgatctgaaggccaagcgcctgaaaagacaggagctgttt
gccaaggagggcctgacttggcagaagattgtccatttctgcactgaggatcgggacaaa
gctgaacagcaagctgccagtcaagaactgaagagcctccttctggcagccaagcagatt
gttggtgctgaacatggtcaggaggccattgaaagtgctgccgtctttctctttgacacc
ttccacaacaaagaccatgtgggcacagaggagaccagagccattaaacacatgtttggc
cttttcccgtcgtcagcagctgaaacctcctgtgcctgcgtggctcggctggtggctcca
gtcgccgagtccaaacttcaagactttatccagacccagagttctcgtcacaagcctgaa
agaggttccacttttggacggaacattgccttctcctttgactgctacacactagagcca
ctggaggacctgcctggctctggtgatcctgacgagagtgggaaattagactttatcaac
ttcatcaacaaccagcagagtgggaagaagcgagccggtgaagatgtgctcagttcagga
agatctctgagctctggagatgaatccatccttcagagtgaggtggagaaatatttagat
ggaggcaacatgatttcatccaacccagaggagctgtgcacctctctgtttgagatgctg
acgtcacacaggagtgatgacgagctgcagaatgagttatttgaactgctgggcccagag
gggctagagatgatatcaactctccttcaacgaaggggagccattgttgactccttcctc
tgcaccccagctgacaggaccggatatgcagcagatgccggtagaaaattcagtagtgag
gtgaccaagcctgcgtttggctgccaggtgaccatccagtcagagaaggagaaacaaatg
atgaagatgtaccggagagaggaaaagaaagaaaagaagagaggcaaaggaacggatgat
ggcgactcctcggatgccgccctgacctttgagcccagagagatgagagcccagcgagag
cacgctctgctgaacgcacgcgttgaacccgtcctaaccagagaaagggtgtatgaacgg
gtccggtatcctaacgtctacgacaactatgcagaagcaacaacagctccggcgtttgtt
ggaggagccaggatgctgctgcctgaagggatccacagagaaaacaacaagatgtacgag
gaggtggagatccctcccaacgagcccatggccgtcggctttgacgagaagcccgtcctc
atctccgacctggaccaggtggggcagctggtgtttaaggggatgaagcgtctgaacagg
atccagtcgctggtgtttgagacggcgtacaacaccaacgagaaccttctgatctgcgcc
cccactggtgctggcaagaccaacatcgctatgctgactgtcctgcatgagatcaggcag
cacctgcagcccgggggcgtcatcaagaaggacgagttcaagatcgtgtatgtggctccc
atgaaggcgttggcagctgagatgactaattacttcagcaagcgtctggagccgctgggc
atcagcgttaaagagctgactggagacatgcagctgaccaaaggagagatcctccggaca
cagatgttggtgacgaccccagagaagtgggacgttgtgactaggaagagtgtcggagac
gtggctctctcccagattgtgcgtcttctaatcttggatgaagttcaccttctccatgaa
gaccgaggcccggtgctggagagcctggtggcccggaccatcagacaggtggagtccacc
cagagtatgatccggatcctggggctgtccgccaccctgcccaactacctggacgtggct
tccttcctgcacgtcaacccctacatcggcctgttctacttcgacagtcgcttcagacca
gtgcccctcggacaaaccttcgtgggcattaaaacaaccaataagatccagcagattcat
gacatcgaggaagtttgttacaacaaagtcctggcgcaggttaaagccggtcatcaggtg
atggtgttcgtgcacgctcgcaacgccaccgtgagaactgctatgggcctaatagagctg
gcaaagaaccacggggaaacgtgcttctttcagccagaccagggtccggactacggccag
tgtgaaaaacagatccaacggtccagaaacaagcagatgagggagattttccctgagggc
tttgggatccaccacgccgggatgctgcggtcggaccgcagcctcatggagagcatgttc
tccaaaggccatgtaaaagtgctggtctgcactgccaccttggcctggggggtgaacctg
ccagcacacgcagtcatcatcaagggaactcagatctacgacgccaagcgtggtgctttt
gtagacctgggcatcctggacgtcatgcagatctttggccgagcgggtcggcctcagttt
gacaagtacggcgagggcactatcatcaccacccacgagaagctgagtcattacttgacg
ctgctgacgcagcagaaccccatcgagagccagttcctgagcagcctggccgacaacctc
aacgcagaggtggctctgggaacggtcaccaatgtggaggaggcggtgaagtggctcagt
tacacgtacctgtacgtccgcatgagggccaacccgctggtgtacggcatcaactaccag
gccttccagatggatccaacgttggcgctgtacaggaaggagctggtgctggagtcgggc
aggaagctggacaaggccaggatgatccgcttcgaggagagaaccggatacttcgcctcc
acggacctgggccggaccgccagccacttctacatcaaatacaacaccatcgagacgttc
aatgagctgttcaactctcagaggacggaggccgacatcctcagcatcgtgtccaaggcc
gaggagtttgaccagctcaaggttcgggaggaggagatggaggagatggagcagatgctg
tgtaactactgcgagctgccggtcaccggcggcgtggagaacggttacggcaaggtcaac
atcctgctgcagacctacatcgggcgaggagaggtggacagcttctccctcatctcagac
gtgtcgtacgtggcccagaacgccgccaggatcgtcagggctctgtttgaggtggctctg
aggaagaggtggcccgctatgacctaccgcctgctcaccctctgcaaggtgatcgacaag
cgtctgtggggctttgctcaccctctccgccagttcccccacctgagccacatcgttctg
aaccgcctggaggagaagagactcacgctggacaagctgaaggaaatgaggaaagatgag
atcggtcacatgctgcaccacgtcaacgtgggtttatccatcaagcagtgtgtccaccag
attccctccgtcaccatggaggccagcatccagccaatcacacgcaccgttctccgcgtg
cgtctcgtcatcacgccggacttccgctggaacgaccaggtgcacggctcggtgggggag
ccctggtggctgtgggtggaggaccccatcaacgaccacatctaccactccgagtacttc
ctgctgcagaagaagcaggtggtgactgcagagccccagcacgtggtgttcaccatcccc
atctttgagccgctgccctcccagtactacatcaaggtggtgtctgaccgctggctgggg
gccgaggccgtctgcatcatcaacttccagaacctgatcctgccggagagacaccccccc
cacaccgagctactggacctgcagccgttaccggtgacggctctggggagcccggagtac
gagagcctgtacaagttcagccacttcaaccccatccagacccagatcttccacacgctg
taccacagcgacaccaacgtgctgctgggggcccccacgggctccgggaagaccatcgct
gcagagatggccatgttccgggtcttcaacaagtacccgggggccaaggtggtgtacatc
gcccctctaaaggccctggtgagagagaggattgaggactggaaggtccggatcgaggag
aaactggggaagagagtggtggagctgaccggggacgtgactcctgacatgagagccatc
gccaacgccgacctcatcgtcaccacgccggagaagtgggacggcgtgagcaggagctgg
cagaaccggagctacgtccagaaggttgccatcctcatcatcgatgagatccacctgctg
ggggaggaccgaggtccggtgttggaggtgatcgtgtccaggactaacttcatctcctct
cacacgtccaagaccgtccgtgtggtgggactgtccacggctctggccaacgctcgggac
ctggccgactggctgggcatcggacaggtgggtctgtttaacttccgtccgtctgtgcgg
cccgtccccctggaggtgcacatccacggtttccccgggcaacactactgcccccgcatg
gccagcatgaacaagcccaccttccaagcgattcgcagtcattcaccggccaagccggtc
ctgatctttgtgtcctcccggagacaaacccgcctgacggccctggacctcatcgcctac
ctggccacggaggacaaccccaagcagtggctgcaccaggacgagagagagatagaagac
atcatcgccacagtgagggattccaacctgaagctcacgctggcctttggcatcggcatg
caccatgcaggcctccatgagagggacaggaagactgtggaggagctgtttgtgaactgt
aagatccaggttctgatcgccaccagtactctggcgtggggcgtcaacttccccgctcac
ttggtggtcgtcaagggaactgaatactacgatggcaaatccaggcgctatgtggactat
ccaatcacagatgtcctgcagatgatgggacgggcaggtcgacctcagtttgatgaccag
ggcaaagcagtaatcttggttcacgacattaagaaggatttctacaagaagttcctctac
gaacctttccctgttgagtccagtctcctgggcgtgctgtcagaccatctcaacgctgag
atcgctgctggaaccatctcctccaaacaggacgccatggactacatcacctggacctac
ttcttcaggcggctggtgatgaaccccagctactacaacctagaagacatcagccatgag
tccattaacaagtatctgtccaccttggtggagagaagcctgcgggacctggagtgctcc
tactgcatagagatcaaagaggacgatcgaacgattgagccactgacttacggtcgcatc
gcctcgtattactatctgaaacatcagaccatctgcctgtttaaagaaagactgaaggct
gagctgtccgtccacgagctgctgtctgtcctcaccgatgcggaggagtacgccgagctg
ccggtccgacacaacgaggaccagctcaacagccagctggctcagcagctccccctgcag
gtcaacccccgctccttcgacagcgcccacaccaagacccacctgctgctgcaggcccac
ttcagccacgccgcgctgccctgcagcgactacaccaccgacaccaagacggtgctggac
aacgccatccgcatctgtcaggcaatgcttgacgtcgctgccaacgagggatggctcgtt
acggccattagtatctgcaacctggtgcagatgatcgtccagggccgctggctgcacgac
tcctcgttactcacactgccacatgtggaacaacaagacctctatctgttcaggaaatgg
gcagataagaaggtgaaggggaatgctccaggcttcagcggagcggtggaaggacttccc
gagctgatcgcctcctgcgggggaaaggaaggagttttcagtgccatgctcagcccaacg
cttcatcctaaccagattgcccaggcgtggggtttcctgagccacctgccggtgctagag
gtgcagctgagcctgaagggctggtgggaggacggccgggagcagggggagcgccggctg
ccggcggccgccaccagcctgagggagcagagcagctggctggacgtccacgccgaccag
gagtacgtcctgcaggtggcgctgcgacgggtcaacgtgggccagcagaggaggaagcag
gacagcaaggcccaggctccgcgcttccccaagaacaaggacgagggctggttcctggtg
gtcggggaggtggatcgcagagagctgctggccgtcaaacggatcggattcgtgcgcaat
cacacggctgtgtcagtggccttctacacacctgagaggaccggaaagtgcatctacacc
ctgtacctgctgagcgacagctacctggggctggaccagcagtacgacatccacctgaac
gtaacccccgccagcatcgcggcccaggtcaacacggaggtggcgggctccacgtccggg
gtttccctcagctag
DBGET
integrated database retrieval system
