Cololabis saira (Pacific saury): 133424880
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Entry
133424880 CDS
T09849
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133424880 (appa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133424880 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csai00535
]
133424880 (appa)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133424880 (appa)
Peptidases and inhibitors [BR:
csai01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
133424880 (appa)
Proteoglycans [BR:
csai00535
]
Cell surface proteoglycans
Others
133424880 (appa)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Others
133424880 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
133424880
NCBI-ProteinID:
XP_061571432
LinkDB
All DBs
Position
24:complement(10301310..10330578)
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AA seq
788 aa
AA seq
DB search
MGRRVALLLLLAAVSAMALEVPTDVSMGLLAEPQVAMFCGKLNMHINVQSGKWEPDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPISIQNWCKKGRKQCRSHMHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPAEAERDADSAEQDTDDSDVWWGGVETDYSDNSMVREPEPAEQQEEAKPSVV
EVDEDEEVPEEEEEEEEDEEDDVLDNDQDGDGEEDEEMVEEEDEEMDEEDGNDDILDALD
DDADDADEPTTSVAMTTTTTTTTESVEEVVKDVCWANAETGPCRAMLPRWYFNRQEGRCV
QFIYGGCGGNRNNFESQEYCLSVCSSVIPTATPSSPDAVDHYLETPADENEHAHFQKAKE
SLEAKHRERMSQVMREWEEAEREAKNLPRADKKAVIQRFQEKVESLEQEAASERQQLVET
HMARVETLLNDRRRLALESYLTALQQDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVR
MVDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGVADDIQDQVELLQREQAEMAQQL
ANLQTDVRVSYGNDALMPDQELGDGQTDLLAQEDSLGLGGIGFIHPESFNQPNTENQVEL
VDSRPSLDRGIPTRPVTGKEMEALPELRMEPDDTQSTEYEVHHQKLVFFAEDVGSNKGAI
IGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVDAAVTPEERHLSKMQQNGYENPTY
KFFEQMQN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtcgagtagctctactgctgctgcttgctgccgtttcggccatggctctggag
gtgcccacagacgtgtctatgggactgctggccgagccccaggtggccatgttttgcggt
aaactcaacatgcacatcaacgtacagagcggcaagtgggagccagacccctcaggcacg
aagagctgcatcggtaccaaggagggcatcctgcagtactgccaggaggtgtatccagag
ctccagatcaccaacgtggtcgaggccaaccagcccatcagcattcagaactggtgcaag
aagggccgcaagcagtgtcgcagccacatgcacatcgtcgtgccttaccgctgcctcgtg
ggagagtttgtgagcgacgccctgctcgttcctgacaaatgcaagttcctgcaccaggag
cgcatggaccagtgtgagagccaccttcactggcacaccgtggccaaggagtcatgcggg
gaccgcaccatgaacctccacgactacgggatgctgttgccgtgcgggatcgaccgcttc
cgaggggtggagttcgtgtgctgccccgccgaggcggagcgcgacgccgacagcgcagag
caggacacggacgactccgacgtctggtggggcggggtggagaccgactactccgacaac
agtatggtgcgggagccggagccagcagagcagcaagaagaagccaaaccatctgtggta
gaggtcgacgaggacgaggaggtgcccgaggaagaggaggaggaggaggaggatgaggag
gacgacgtgctggacaacgaccaggacggagacggggaggaagacgaagagatggtggag
gaagaggacgaggagatggacgaggaggacggcaacgacgacatccttgacgcgctcgac
gacgacgccgacgatgccgacgagcccacgaccagcgttgccatgacgaccaccaccacc
accaccaccgagtccgtggaggaagttgtcaaggatgtgtgctgggccaatgcagagacc
ggcccgtgccgggccatgctgccccgctggtactttaaccgccaggagggccgctgcgtt
cagtttatctacggcggctgcggaggcaacaggaataactttgagtcacaggagtactgc
ctgtctgtctgcagcagcgtcatacccacagccacacccagctccccagatgccgtggac
cactatctggagactcctgctgacgaaaacgagcacgcccacttccagaaggccaaggag
agtctggaggccaagcaccgcgagaggatgtcccaggtgatgagggagtgggaggaggcc
gagagggaggccaagaatcttccccgtgccgacaagaaagctgttatccaacgtttccag
gagaaggtggagtctctggagcaggaggcggccagcgagcgccagcagctggtggagacc
cacatggcccgcgtggagaccctgctcaacgaccggcgccggctggccctggagagctac
ctgacggcgctgcagcaggacccgcccaggccccgtcacgtcttcagcctcctgaagaag
tacgtgcgcgctgagcagaaggacaggcagcacaccctcaaacacttcgaacatgtccgc
atggtggatcccaagaaggcagctcagatcagaccccaggtgctgacccatctgcgtgtg
attgaggagcgcatgaaccagtccctgggactcctctacaaggtccccggcgtggctgac
gacatccaggaccaagttgagctgctgcagcgggagcaggcggagatggcccagcaactg
gcgaacctgcagacagacgtgagggtcagctacggaaacgacgccctgatgcccgaccag
gagctgggagacggccagaccgacctgttggcccaagaggactccctgggactcggggga
atcggcttcatccaccccgagagcttcaaccagcccaacaccgagaaccaggttgagctc
gtggattctcgccccagtctggacagaggtattcccacacggccagtgactggaaaggag
atggaagctcttcccgagctgcgaatggagccagatgatacacagagtactgaatatgaa
gtccaccaccagaaactggtcttcttcgctgaggatgtcggctccaacaagggcgccatc
atcggcctgatggtcggaggcgtcgtcatagcaacggtgatcgtcatcactctggtgatg
ctgaggaagaagcaatacacctccatccaccacggagtcatcgaggtggatgctgccgtc
acccccgaggagcgccacctgtccaagatgcagcagaatggttatgagaatccaacctac
aagttctttgagcagatgcagaactga
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