Cololabis saira (Pacific saury): 133424899
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Entry
133424899 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133424899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133424899
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133424899
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133424899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
Ig_DSCAM-DSCAML_C
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
133424899
NCBI-ProteinID:
XP_061571459
LinkDB
All DBs
Position
24:11508466..11586931
Genome browser
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCATNESVQSIGAFQCPTCR
YVISLSPERGLDGLKRNVTLQNIIDRVQRASSSAGLPLPLPAPHSGPNSPSEEGGNRLAL
VPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHEEEKVNMYCVSDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQII
GSKIKEGKAQRLRKLAQQITNCKQCIERSSALITQADQTLKETDHARFLQTAKCINERVS
MATASTQVLIPEIHLTDTFDTVALDFTREKKLLESLDYLTAPSAPCIREELCTASYDTIS
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLDSWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHNQD
RFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAIGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLEPNN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggaatcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgcccacagcctgtgcttcggctgcgcccaccgcatcctggtctcc
cactgcgccaccaacgagtccgttcagagcatcggcgccttccagtgccccacctgtaga
tatgtcatctccctgagtccggagcgaggactagacgggctgaagagaaacgtgacctta
cagaacatcattgacagagttcagcgggcctcatcttccgccgggctcccgctaccgcta
cccgccccccacagcgggcccaactcccccagcgaggaaggcggcaaccgcctggcgctg
gttcccgtcagcgccgccatgtccagcccgggaactcccccggagccggtccagtgccag
ttctgcgagcaggacccgccgcaggacgccgtgaagacgtgcgtgacgtgcgaggtgtcg
tactgcgaggagtgcctgagggccacccaccccaacaagaagcccttcacgggccaccgg
ctcatcgagcccatgccggactcccacctgcgggggctgcagtgcctggagcacgaggag
gagaaggtcaacatgtactgtgtcagcgacgaccagctcatctgctccctgtgcaagctg
gttggacggcaccgggaccaccaggtggcagcactgagcgaccgctacgaaaaactcaag
caagccctggattccaacctgagcaatctgatcaagaggaacaacgagctggagtctctg
atggggaaactgatccagacttgtcagcacgttgaggtgaacgcatcccgccaagagggc
aagctcctggaggagtgtgacgttctgattgacatcattcagcaacggaggcagatcatt
ggcagcaagatcaaagaggggaaggctcaaaggcttcgaaagctcgcccaacagatcacc
aactgcaagcagtgcatcgagagatcctccgccctcatcacacaggctgaccagacgctg
aaggaaacggatcacgctcgattcctgcagacggccaagtgcatcaacgagagggtttcc
atggcaactgcgtcaacccaggtactgatccctgagatacacctgacagacaccttcgac
accgttgccctggacttcaccagagaaaagaagttgttggaaagtctggattatctcact
gctccaagtgctccgtgcataagggaagagctgtgcacggcttcttacgataccatcagt
gtccactggacatctgatgatgaattcaccgtggtgtcctatgagctccagtacgccatc
ttcaccggccagtccaacattgccagtctatgtaactcattggacagttggatgattgtt
cccaacattaaacaaaaccactacacggtacacggtctgcaaagtggcacaaagtatatc
ttcgttgtcaaggccattaaccaagcgggaagcaggagcagtgaaccagggactctgaag
accaacagccagccattcaaactggaccccaaatctgcacacaagaagctaaaggtgtcc
cacgacaacctcaccgtggagcgagatgagaccacttccaaaaaaggccacaaccaggac
cgtttctccagccagagcagctatggcgttgtgggaaatgtctacatagacagcggacgt
cactactgggaagctctgattggagggagcacatggtatgctattggcatagcctacaaa
tcagccccaaagcacgagtggatcggcaagaactcagcatcctgggtactctgccgttgc
aacaattcctgggtggttcgccacaacagcaaggagctggctatcgagccttcgccccac
ctgcgtcgcgtcggggtcctgctggattacgatgcgggatacgtgaccttctacgatgcc
gtgggctcccagcacctacacacgtttcacgtctcttttgtccagcctgtgtgtcctgta
ttcaatgtgtggaataagtgtctgaccatcctcactggtcttcccatccctgaccaccta
gaggggctggaacccaacaactga
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