Cololabis saira (Pacific saury): 133424950
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Entry
133424950 CDS
T09849
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04136
Autophagy - other
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133424950 (atg13)
04136 Autophagy - other
133424950 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133424950 (atg13)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133424950 (atg13)
Membrane trafficking [BR:
csai04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133424950 (atg13)
Atg1 complex
133424950 (atg13)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133424950 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
133424950
NCBI-ProteinID:
XP_061571533
LinkDB
All DBs
Position
24:complement(9198158..9206260)
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AA seq
529 aa
AA seq
DB search
MESDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLMAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCGSGRPANMGHPCNYRAPGDE
DGGAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRLSYQPDFCHPAAHTTQVLHVGKEGGAVPAHSQALQGADVHLTVEHAPNTPSSSGDD
EGLSPSGEERRSVSPNDPVESLNAFTRKVGAFVNKPSNQITAANLDLPFAAFAPRGLESE
ENDPMVQPPDSPPSQSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDDLLPMDLGTFYR
EFQNPPQLASLSLHISSQSMADDLDSLPEKLRVYEKNIDEFDAFVETLQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacctgagtccacaggataaaaaagacttggacaagttcattaaattcttt
gctttgaagactgtccaggtgatagtacaagctcgcctcggggaaaaaatatgcacccgc
tcttcgtcatcgcccactggctctgactggtttaacttggccatcaaagacataccagag
gtcacccatgaagccaaaaaggctctggctggacagcttccaggcatcgggcgctccatg
tgtgttgagatctcccttaagacatcagagggggactcaatggagttagagacttggtgc
ttggagatgaatgaaaagtgcgataaggacatcaaggtgtcttacacggtgtataatcgc
ctgtctgtccttctgaagtctctgatggccatcaccagagtaacacctgcctacaaactg
tccagaaagcagggacatgactacgtcatattgtacaggatctacttcggagaggtccag
ctgagtggattaggagaaggtttccagacggtgcgcgtcggcgttgtcggcactcctgtt
ggcacggtcaccctctcttgtgcctaccgcaccaacctggcattcatgtccaacagacag
tttgaaaggtccgctcccatcatgggaatcattgtggatcactttgtggaccccccctgc
ggcagcgggcgtccagcaaacatgggacacccctgcaactacagagccccaggtgacgag
gacggcggggcatttgcaggagtccaggactcccaggaggtctgcaccacctccttctcc
acctctcccccctctcagtgcgtatgcacgctgagtccatctccttctaaactgtccaag
cccctccctttggacagtctgcagctcccattggctcctggacttgtcactcacaatctg
tacgcctccaggttatcctaccagcctgacttctgtcaccctgcggcgcacacaacccag
gtactgcatgttggaaaagaaggtggggctgtgccggctcattctcaggctcttcaggga
gcggatgtgcatctgacagtagagcatgcccccaacacaccaagcagcagtggcgatgat
gaaggtctgtcaccgagtggcgaggagaggaggagcgtgtctcccaacgaccccgtcgag
tctctcaatgcattcaccaggaaagtgggagcttttgtaaacaaacccagcaatcagata
acagcagcaaatctggacctgccgttcgctgcattcgcccctcgaggcctggagtcggag
gagaacgatcccatggtgcagcctccagactcccccccctcccagtcccccctgcaggcc
agccttcactctcagggctcggagggatcaggccagcaggacgactttgtcatggtcgac
tttcgtccagctttctccaaagacgacttgttgccaatggatctgggaaccttctaccga
gagtttcagaacccgccgcagttggccagcctgtcacttcacatcagctcccagtccatg
gccgacgacctggattcgctgccagaaaaactgcgcgtctacgagaaaaacatagatgag
tttgacgcttttgtggaaacgcttcagtag
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