Cololabis saira (Pacific saury): 133424973
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Entry
133424973 CDS
T09849
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
csai
Cololabis saira (Pacific saury)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
133424973
NCBI-ProteinID:
XP_061571578
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Position
24:6709906..6728143
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AA seq
745 aa
AA seq
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MVAASLHFAYQLISVFHLCWLHLAHGGAYYGQKQPPQQPQALPQYGDGFPQQQFLGNEMP
PSSYGNEGPLLTQYGKEFPQLPLQMGKQRPLGNGKGKGQTFPRGSKGPQPVPGGDVIREG
PQGIQGPPGARGPPGPSGNPGQPGQGLPGPPGKPGPPGPLGYKGIGKPGMPGMPGKPGGS
GIPGQKGDLGPNGGEGPTGHPGPPGLPGPSGLPGIAKHGGLGLPGVTGPPGEPGPKGPPG
LPGLSGPKGDKGVGLPGFPGLKGPGGPQGPPGQVGLPGIGKPGLNGLPGQPGIPGKPGGP
GESGVVGSPGERGLPGVPGMPGIGKPGKDGFNGQPGPTGGRGEPGLPGSSGPPGLPGYGK
PGFPGQNGHKGHAGIPGPLGPKGDKGNVGLPGVIGPTGVSGMPGQPGPIGPPGSLGFTGQ
KGEDGDGGQRGNPGAKGQIGPSGLPGQPGRGGESGQPGPRGFQGPTGPKGEGGMRGLPGA
PGASGLSGPRGEGGEPGDKGPQGPQGIPGLSGPGGPIGPPGLPGQKGETGPSGNPGYPGE
GNPGPPGQVGSQGSPGPIGPPGLTGQQGPPGPPGPPGLPAASPDLVQILPHSGPYNGQGY
KKPKNGGEISEASLEMPAFTAKLTTPYPPVGSPIIFDKLLHNGNQDYSPQNGVFTCRIPG
IYYFAYHVHCKGSNVWVALMKNNEPVMYTYDEYKKGLLDQASGSAVLPLRKGDTVHVQLP
SDQAAGLYAGQYVHSTFSGYLLYSM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgcatcacttcattttgcttatcaactcatctcagtcttccacctatgttgg
ttacatctggctcatggtggagcatattatggacagaaacagccacctcaacagccccag
gccttaccacagtacggtgatgggtttcctcagcaacagtttctgggtaatgagatgcca
ccctcatcttatggaaacgaagggccattgctgactcagtatggaaaagagtttcctcaa
ctacctttgcaaatgggaaaacagagaccattgggaaatggtaaaggtaaagggcaaact
ttcccaagaggatctaaaggtccacaaccagttcctggtggggatgttatccgagaggga
ccacaaggaattcagggtccaccaggagcaagaggccccccaggaccatcaggcaaccca
ggccaaccaggacaggggttgccaggtccgccgggaaagccaggaccccctggtcctctg
ggctacaaaggaattggaaaacctggtatgccagggatgccaggaaaacctggaggatct
ggaataccaggacaaaaaggtgaccttggtccaaatggtggtgaagggccaactggacac
cccgggcctccgggactcccaggtccttcaggtctacctggaatcgcaaagcatggaggt
ttggggctgccaggcgtgacaggcccaccaggagagcctggcccaaaaggtccaccaggg
ttacctggtttgtcaggcccaaagggagacaaaggagttggcctacctggttttccaggt
ttgaaaggacctggtggaccacaaggtccccctggacaagtgggcctccctggcattggt
aaacctggccttaatggtctccctgggcagccagggataccaggaaaacctggtggtcct
ggagaatcaggggtggtagggtcacctggtgaaagaggccttccaggtgtaccaggcatg
ccaggaattggaaaaccaggaaaagatggtttcaatggtcaaccagggcccacaggtggg
agaggggagccaggtcttcctggttcatcagggcctcctgggttgccaggttatggtaaa
ccagggtttcctggccaaaatggtcataaaggacatgctggtattccaggaccacttggc
ccaaaaggagataaaggtaatgtaggtcttccaggggtcattggtcccaccggcgttagt
ggaatgcctggtcagccaggtccgatagggcctcctggtagtcttggattcacgggacaa
aagggagaggatggtgatggaggccaaagaggaaatccaggagcaaagggtcaaattggg
ccttcgggtcttccaggacagcctggcagaggaggggagtcaggacaacctggaccaaga
ggttttcaaggacctactggtcctaagggagaaggcggtatgaggggtttacctggtgct
ccaggtgcttcaggattatcaggaccaagaggagaggggggagaacctggagacaaaggc
ccccaaggaccacagggtattcctggactttccggaccaggaggaccgattggacctcct
ggacttccagggcaaaaaggtgaaacaggcccatcaggaaaccctggttatcctggtgag
ggaaacccaggaccccctggtcaagttggctctcaaggtagcccaggtccaattggccct
cccggacttacaggacaacaaggaccccctggcccccctggtcctccaggactacctgct
gcatctcctgacctagtgcagatcctgccacacagtggcccatacaatggccaaggttac
aagaagcccaagaatggaggggagattagtgaagctagcctggagatgcctgcattcaca
gcaaagcttacaactccataccctcctgttgggtctcccatcatctttgacaaactcctg
cacaacggcaatcaggactacagtccccaaaatggtgtttttacctgtcggataccaggc
atctactactttgcttaccacgtccactgcaaagggagtaatgtttgggtagcactgatg
aaaaacaatgagccagtaatgtacacttatgatgaatataaaaagggtttactggatcag
gcctcggggagcgccgtactcccattacggaagggagacactgtgcatgtacagctacca
tcggaccaggcagcaggactttatgccggtcagtacgtccactctacattttctggatac
ttattatactcgatgtaa
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