Cololabis saira (Pacific saury): 133424998
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Entry
133424998 CDS
T09849
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
133424998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133424998
Transporters [BR:
csai02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
133424998
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
133424998
NCBI-ProteinID:
XP_061571610
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Position
24:complement(10380619..10404343)
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AA seq
630 aa
AA seq
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MAVCLSLPEPVMGDPLPSHQANQPLTKFPPAILPNGKDVGKEGLLARGQWASKAEFLLAV
AGQIIGLGNVWRFPYLCYKNGGGVFFVPYLLFLVLCGIPLFLLETSLGQFTSLGGVSAWR
TMCPLFGGLGYASQVMILHGCVYYIVILAWALFYLSYSFQAVLPWSHCNNTWNTNACVLF
HHRNQTVNGSSLPENATSPVMEFWEREVLRLSSSLDELGPVSWKLALCLAAVWFVCYFCV
WKGVKSTGKVVYLTATFPYVMLLVLLVRGATLPGATQGIIYYLKPNSTRLADPQVWMDAG
TQIFFSYGICLGSLTALGSYNKYNNDCYKDSFMLCLLNSFTSFLAGFAIFSVLGFMAEEQ
GVDISSVAQSGPGLAFIAYPRAVAMMPLPQLWAVCFFLMIIMLGLDTQFVSLEALMTSVT
DLYPHLIRRGHRRELLLLFVCIVCFLVGLVMITPGGLYVFQIYDHFSCSGASLLLLSIFQ
SVAIGWVYGADRFSSNIKDMTGHTPLPFFKLCWRYLTPALCTATFIFSLVRWSPLSLGKG
LVAPTWATTLGWILTLSSVSLLPIWALYALLTTPGTLAQRFQILCSPAEKSSLAFHHIST
NGSVLTYSPVLPLTEKSREKMTELMQDQAT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgcttgtctttgccagaaccagtgatgggagacccgttgccttcccaccag
gccaaccagccgctgactaagttcccaccagcaatcctccccaacgggaaggacgtgggc
aaggaagggctgctggcccggggccagtgggcgagcaaggctgagttcctcctggccgtg
gcgggtcagatcatcgggctgggcaacgtctggagatttccctacctctgctacaaaaat
ggaggaggggtcttctttgtgccctacctgttgttcctggtgctgtgcggcatccccctg
ttcctgctggagacctcgctgggacagtttaccagcctggggggcgtcagcgcctggagg
acgatgtgcccgttatttggaggtctgggttacgccagccaggtgatgatcctgcacggc
tgcgtgtactacatcgtcatcctggcgtgggcgctcttctacctgtcctacagcttccag
gcggtgctgccgtggtcgcactgcaacaacacctggaacacgaatgcgtgcgtcttgttc
caccaccgcaaccagacggtcaacggaagcagcctgccggagaacgccacctcccccgtc
atggagttctgggagcgggaggtgctgcggctgtccagctccctggacgagctgggaccg
gtcagctggaagctggctctctgtctggctgccgtctggttcgtctgctacttctgcgtg
tggaagggagtgaagtccaccgggaaggtggtgtacctgacggccaccttcccctacgtc
atgctgctggtgctgctggtgcgcggggccaccctacctggagccacccagggcatcatc
tactacctcaaacccaacagcacccgcctggcagacccacaggtatggatggatgcaggt
acccagatatttttctcttatggaatctgcttggggagtctcacagctttgggcagttac
aacaaatacaacaatgactgctataaggactccttcatgttgtgcctcctgaacagcttc
accagcttcctggctggtttcgccatcttctcagtgctgggcttcatggctgaggagcag
ggcgtggacatctcctctgtggcccaatcaggacctggccttgccttcatcgcctacccg
agagctgtagccatgatgcctctgcctcagctgtgggccgtctgcttcttcctcatgatc
atcatgctggggctggacacgcagttcgtgagcctggaggccctgatgacgtcggtgacg
gacctgtaccctcacctgatccgccgaggccaccgccgggagctgctgctgctgttcgtc
tgcatcgtctgcttcctggtgggactggtcatgatcacgccggggggtctgtatgtgttc
cagatctacgaccacttctcctgcagcggagccagcctgctgctgctctccatcttccag
tctgtggccatcggctgggtctacggagccgaccgcttcagcagcaacatcaaggacatg
acgggccacacccccctccccttcttcaagctgtgctggagatacttgaccccggccctg
tgcaccgctacgttcatattctccctggtgcgctggtcccccctgagcctggggaaaggg
ctggtggctccgacatgggccacgacactgggctggatcctgactctctcctccgtgtcc
ctgcttcccatctgggccctgtacgccctgctgaccacgccgggaactctggcccagcgc
ttccagatcctctgcagtccggcggagaagtcctcgctggcgttccaccacatatccacc
aacggctcggtgctcacctacagccccgtgctgccgctcaccgagaagtccagggagaag
atgacagagctcatgcaggaccaggccacatga
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