Cololabis saira (Pacific saury): 133425007
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Entry
133425007 CDS
T09849
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133425007 (obsl1a)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
133425007 (obsl1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_6
Izumo-Ig
Ig_4
C2-set_2
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
133425007
NCBI-ProteinID:
XP_061571628
LinkDB
All DBs
Position
24:complement(6256954..6272477)
Genome browser
AA seq
2211 aa
AA seq
DB search
MDIFGGAPRVLGYPRPVVAQSGTDATLKCQIGGDPRPDVIWERKNVQILSEGRYKLSEEG
KVYLLTITGVNPEDAGQYICKARNSVGETYAAASLKVEGEAKSQDGELMQLRVNGGTQSI
KENGDFSGHVNGYGPVQNGESVEEMKEEQKQNNNLSKKLEGIDLIPNDKPRFLIKPLSLR
VDRGEDAAFSCKISGTPLPNVCWEKDGKKLSDIFESSHFSVSNQDGGWFQLKIYRTRMPD
KGVYTCKAVNGHGEALAGAVLLVEPVPEREESKISSNSHTNSQWSPKPRSGRLGLSKLME
EPPVNAAKVKKFAVTEGKHAKFRCFVTGKPKPEIIWKKDGNPLEPDRRHLIFEDREGYYT
LKVLYCKLQDTGLYVCAASNTLGNTLSAVHLTVKGPAVRFRRSLQDVEVRERDVAVLECE
VPDEKIPAAWYLEDQRLMPSSKYGMEQKGTRRRLTIHDIGADDDGVYLCEMPDGAKSIAE
LSVKGTILRKLPRKLEVLEGENAAFCVEVEDDDLEIHWFKDGLKLHETHQTILKSFGKTH
ILVFVNVAHHDSGVVTFVTGRSKTSSRLKVKATKHSPPICPGDIKMDVDRPNSALLTWVA
APNSQTSTRSVFVLERQEVGSQEWQKCFTSETDTSVEVTGDSVPCEGNYRFRVSCINKYG
RSGHVEFPNVVHLAPGPKIHSHLKSCEMVEGEDAHFSIELSTSMVGTWFFNSSQLQHGGR
YSIQHTQTKHSLVIHETQAADDTAEITFIANGVRDSAVLKVKPAVVKFTPLSELDSNKKV
EAGEAIVLYCEVSHPAAKVSWFKDGEELQVTEGLNIQSDGNMRRIVIQDADVSHSGVYTC
ETSADVIKFNVDVGGPPVEFSPVAEDELHKSSMELDPVVLLCHVSTADAEVVWYKDGCEI
QPTDNITLQEEGTMRRLIIRSAETSDAGSYTCQAGNNSMDFTVNIREPPVIIVEPKDDVV
MEGYGSEEINLQCELSRSSGKVRWFKDGLQVQESDEIQLISEGPYRKLSILCAAGEDSGE
YVCETDGDSVFFQLIVKEPPVKIVSPSQSEVEVSHLASERLELSCEISQADARVRWYRDS
LEVEEGCNLILEEDGAKRGLVIPCTTVDDTGEYICYTEDDSVAFLVTITEPPVTLTRPQN
IPDQVASFTGEPIVLEIEVSRPSAEVQWWLNGREIKESSNFTITEDSLIRRLTIHSPTPD
DSGEYTCYASDDKIDFQVNVTEPPVNILRKSEDESNLKFMVSDDIVLECELSRANASTKW
YKDGCRLGEDERFCEEEEGAFRSLVILNAELEDSGEYLLDVGDDSLTFQVTVEEPPVTIV
GNSYDDDYQEMVAGDDLILACEVSRANGPVTWYCNDRMLTNDSRTTIESYGTLRKLIISS
IESSDSGKYVCDAVDDKMVSIVRIQEPPVTFVNKEDDIVVTGYEAESVTFESYVSKDRAL
VRWLKDWTTVEGERFQALMEGHKRTLTIDPLRRSDAGEYTCDVNTDQIHFSLLVREMRIK
FVKALQDTVAHADGMVTLRCEVCKPKADVQWLKNGAEVIPSRRFSIRADGCERSLTIHRL
TREDAGEYTCESRDDQTTATLRVEMPRVVEFLTDLHNTTVLEGEDATFKCVVSPDDVQLI
WLMDNEPIVMGNRFQATQNGLCHMFVIKKCQILDSSKITAEAEGQMSKASLKVQEAQVMF
TKKMDVVIGEEFGDATLEAEIGLETGEVQWMRQGVVIQSGSRHTLAQSGCKRSLTIHNLT
LSDRGTYRCETLHDRTQVKLNVEPRKIVIRKGLADQETFERETASFEVELSHTDVEGVWQ
KDGIRVKPNNQFRVSTNGQVHGLTLCNLTIEDTGTIVFSAEGVRTTARLTVKETPVSILK
PLADVRVEEEFPATLECEFSRQNVEVRWLKNGTELKPGKNYRIYSMGRKRFCQILQCSRA
DSGSYTCDAGENNTSCSLEVYEHELEIVHDLEDLYIQEDQNAVFMCEVSLEDVNGEWYKD
GHRIRPTSTTKTRTEGTKHFLLMCNVKAEDAGEIRFVARDVESTAYLEVEELPVSIVKPL
RDRTALEKHRLILECTVSSARSSVTWYKDRQELVSSDRMEIQADGCCHKLTIHKVDVEDE
GTYSIEVGEHTSTAKLMVEAQALVMVTELQDVEVAEPEAASFQCEVSVDINKPPVWTLNG
VALQQGPSIRLENHGTVHKLTLRETSVDMSGTVKFTMGKAKSSATLSVIGE
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttggtggtgctccacgtgtgctgggctatccacgccctgtcgtggcacag
agtggaacagatgccacactgaagtgccaaattggcggagaccctcgtcccgatgtcatt
tgggaacgtaaaaatgtccaaatcttgtctgaaggacgatacaagctctcagaggagggg
aaagtgtacttgttaaccattactggagtgaatcctgaagatgctggccagtacatctgc
aaggctagaaatagcgtaggtgaaacctatgcagcagcttctcttaaagtggaaggagaa
gcaaagtcacaagatggagagctgatgcaattaagggtcaatggtggaacccaatcaata
aaggaaaatggagattttagtggacatgttaatggatacggcccggtgcaaaatggtgag
agtgtggaggaaatgaaagaagagcagaagcagaataacaatctaagcaaaaagctggaa
ggcattgatttaatacccaatgataagccacgattcctgatcaagcccctgtctctgcga
gtggataggggagaggatgctgctttctcctgcaaaatctcgggcacacctttgcccaat
gtatgttgggagaaagatgggaaaaagctgagtgacatctttgagagctcacacttcagt
gtgagcaaccaagatggtggctggttccagctcaagatctacaggacgcgtatgccagac
aaaggtgtttatacgtgcaaggctgtcaacggtcacggtgaggccttggccggagccgtc
ctcctagtggaacccgtaccagagcgagaagagagtaagatttcctcaaacagtcacact
aacagccagtggtcaccaaagccccgatctggacggctcggcttgtccaagctcatggag
gagccgccagtcaacgcagcaaaagtcaaaaagtttgcagtaacagaggggaagcacgcc
aagtttcgctgctttgtgacgggcaaaccgaaacccgagatcatctggaagaaggacggg
aatcccctcgaaccagacaggcgtcatctgatatttgaggacagagagggttactacaca
ctgaaggttctgtactgcaagctccaggatacaggactgtatgtgtgcgctgcatcaaac
actcttggaaacacccttagcgctgttcatcttactgtgaaaggcccagctgtgcgattt
agacgctccttacaagacgtggaggtgagggagagggatgttgctgtgctggagtgtgag
gtgccagatgagaagataccagctgcctggtaccttgaagaccagcggctgatgcccagc
agtaaatatgggatggagcagaaaggaaccagacggagactcaccatccacgacattgga
gcagatgacgatggagtctatctgtgcgaaatgcctgatggagcaaagagcattgccgag
ctatcagttaaaggtactattcttcgtaaacttccccggaagctggaggtcctcgagggg
gagaatgcagcattttgtgtggaggtggaggatgatgatctggagatccactggttcaaa
gacggcctgaagcttcacgagacgcaccaaaccattctgaaatccttcggtaaaacccac
attctggtctttgtaaacgtggcccatcacgactcgggggttgtgacgttcgtcacagga
agatccaagacgtcgtcacggcttaaagtcaaagccaccaaacacagccctcctatctgc
cccggggatataaaaatggatgtggatagacccaacagtgctctgctcacctgggtggcc
gcccccaacagccagacctccacccgctctgtctttgttctggaacggcaggaagtgggc
tcgcaggagtggcagaagtgtttcacctcagagaccgacacctctgttgaagtcacgggg
gacagcgtgccttgtgaaggcaattaccgcttccgtgtcagctgcatcaacaaatatgga
cgaagtggccatgtagagtttcccaacgttgtccatcttgccccaggccccaagattcac
agccatctcaaaagctgtgagatggtggaaggagaagatgctcatttctcaattgaactg
tccacctcgatggtcggaacttggtttttcaatagctcccaactgcagcatggtgggcga
tattcaatacaacacactcaaacaaagcactcgctggtgatccatgaaactcaagcagca
gatgacaccgctgagatcacattcatagccaacggagtcagagactcagctgtgctcaag
gttaaacctgccgtggtgaagttcaccccactgtcagagttagacagcaacaagaaagtg
gaggcaggtgaggccatcgttctctattgtgaagtctcccaccctgctgcaaaagtttcc
tggttcaaagatggagaggaacttcaggtgactgaaggcctgaacatccagtcagacggg
aatatgaggaggatagtgatccaggatgctgatgtatctcactcgggagtttatacgtgt
gaaacgtcagcggatgtcatcaaattcaacgttgatgtaggaggtcctccagtggagttc
agtccagtcgcagaggacgagctgcataaaagcagcatggagctggaccccgtggtcctg
ctctgccacgtgtccacagctgacgctgaagttgtgtggtacaaagacggctgtgagatc
cagcccactgacaacataactctgcaggaggaaggaaccatgaggaggctaatcatccgc
tctgcagaaacttcagatgctggaagttacacgtgccaggcaggaaacaacagcatggac
ttcactgtcaatatcagagaacctccagtgataattgtggaaccaaaagatgacgttgtg
atggaaggttatggatcagaggagataaacttgcagtgcgagttgtctcgctccagcggg
aaagtgcgctggttcaaggatggcctgcaggtgcaggaaagtgacgagatccagctgata
tcagaaggtccttataggaagctcagcatcctctgcgccgcaggagaggacagtggagag
tatgtctgtgaaacagatggagactctgtcttcttccagctgattgttaaagaaccacca
gtaaagatagtttctcctagccaatcagaggtagaagtgagccacttggcctcagagagg
ctggagctcagctgtgagatctctcaggccgatgcacgggtccgttggtacagggacagt
ctggaggtagaagaggggtgcaacttgatcctggaggaggacggggccaagcgcggtcta
gtcataccttgtacaactgtggacgatactggggagtacatttgttacactgaagatgac
tccgtggccttcctggtgaccattacagagccaccagtgacacttacccgtccccaaaac
atacctgatcaagtggccagcttcacaggagaaccaatcgttctggaaatagaggtgtcc
cgtccgtcagcagaagtccagtggtggctgaatggcagggaaataaaagaaagcagcaac
ttcaccatcacagaggactccctcatccgccgcctgaccatccactctcccactcctgac
gattctggggaatacacctgctatgccagtgatgataaaattgatttccaggtcaatgtt
acagagccaccagtgaatatcttaagaaagtcagaagacgagtcaaacttaaagttcatg
gtttccgatgacattgtgctggagtgtgagctctcaagagcaaatgccagcaccaaatgg
tacaaggatggctgtcgtcttggggaagatgaaagattctgcgaagaagaagaaggtgct
ttccgctcactggtcatcctcaatgctgaacttgaagattcaggagaataccttcttgat
gttggagatgacagccttaccttccaggttacagtagaagagcctccagttaccattgta
ggaaactcgtatgacgatgactaccaggagatggtagcaggcgatgacctaatcctggct
tgtgaggtgtctcgggccaatggccccgttacctggtactgcaatgacaggatgctcacc
aacgattcccgtaccaccattgaaagctacgggaccctgagaaaactgatcatctcaagt
atagagtcatccgattctggaaagtacgtgtgcgatgctgtggatgacaagatggtcagc
attgtcaggattcaagagcctccagttacttttgtaaacaaggaggacgacattgttgtt
acgggatacgaagcggaaagtgtgaccttcgaaagttacgtgtccaaggacagggctctg
gtgcgatggcttaaggactggacaacggtagaaggtgaacgcttccaagcgctcatggag
ggccataaacgcactcttacgatagaccctttaagacgctctgatgctggggaatacacc
tgtgatgtcaacacagaccagatccacttcagtctgctggtgagagaaatgaggattaag
tttgtaaaagccctccaagatactgtggctcacgccgatgggatggtgaccctgcgttgt
gaagtgtgcaagcccaaagcagacgtccagtggctaaagaacggagcagaggtgatccca
agcaggaggttctccattcgggcagatggatgtgaacgaagcctgaccatccaccgttta
actcgagaggatgcaggggagtatacctgcgagtccagggatgaccagaccactgcgaca
ctaagagtggagatgcctcgagtggtggagtttctcactgaccttcacaacacaaccgtg
ctggaaggagaagacgccaccttcaagtgtgtcgtctctcctgatgacgtccagttgatc
tggctcatggacaatgagcccatcgtcatgggcaatcgtttccaggcaacgcagaatggc
ttgtgccacatgtttgtcatcaaaaagtgccagatattagattcttcaaagattacagca
gaagctgaaggacagatgagcaaagccagtctcaaagttcaggaggctcaggtcatgttt
acaaagaaaatggacgtggttatcggggaggagttcggcgatgccaccttggaggcagag
atcggcctagagacgggtgaggtccagtggatgaggcaaggggtggtcatccagtccggt
tcccgacacacgctggcccagagcggctgcaaacgcagtctgaccatccacaacctgact
ctgtcagaccgggggacctaccggtgcgagactcttcacgaccggacgcaggtcaaactc
aatgtggaacccagaaaaatcgtgatccgcaaaggcctagctgaccaagaaacctttgaa
cgggagacggcttccttcgaggtggagctctcgcacacagatgtagaaggggtttggcag
aaagacggcatccgcgtgaaacccaacaaccagtttcgtgtgagcaccaacgggcaggtc
cacggcctcacgctgtgcaacctgaccattgaagacacgggtaccatcgtcttctcagct
gaaggagtgcgcaccaccgccaggctcacggtcaaagagacaccggtgtctatcttgaaa
ccgctggccgatgtccgtgtggaggaggaatttcctgccactctggaatgtgaattctcc
agacaaaatgtcgaagtcagatggttaaagaatgggacagagctgaagccggggaagaac
tatcggatctactccatgggtcggaagcggttctgccagatcctgcagtgttcccgggct
gactctggctcgtatacatgtgacgcaggggaaaacaacacttcctgctccctggaggtt
tatgaacatgagctggagatcgttcacgatcttgaagatctctacattcaggaagaccag
aacgccgtgttcatgtgtgaggtttctctggaggacgtgaacggggagtggtacaaggac
ggccacaggattcggcccacgagcaccacaaagacacgcactgaagggaccaaacacttt
ctgctcatgtgcaatgttaaagcggaagatgctggagaaatccgttttgtagccagggat
gtggagtcaacagcctacctggaggtagaagaacttccggtgtccattgtaaaaccccta
cgagaccgaactgccctggagaagcaccggctaatccttgaatgcacagtgtcctcggcc
cgctccagcgtgacctggtacaaagacagacaggagctggtttcttcggatcgcatggag
atccaggcggacggctgctgccataaactaaccatccacaaggtggacgtggaggatgag
ggcacctacagcatcgaggtcggggagcacacatccacagctaaactgatggttgaagcc
caggcccttgtgatggtgacggagctacaggatgtggaggtggcagagccggaggcggct
tctttccagtgtgaggtgtccgttgacataaacaagcctccagtttggactttgaacggg
gtggctcttcaacagggcccgtccatccgcctggaaaaccacgggacagtccacaaactc
acgttgagggaaaccagtgtagacatgagcggcacagtgaagttcaccatgggcaaggca
aagagcagcgccacgctcagcgtgatcggagagtag
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integrated database retrieval system