Cololabis saira (Pacific saury): 133425110
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Entry
133425110 CDS
T09849
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133425110
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133425110
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Gene cluster
GFIT
Motif
Pfam:
dsrm
A_deamin
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
133425110
NCBI-ProteinID:
XP_061571774
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Position
24:complement(23767453..23799890)
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AA seq
588 aa
AA seq
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MPFFLNLNLSPSPRESECSRFQEAVKTLSCRADPLVLIGETLRRRMEEEEEGGPRSRTIN
EPSGPIVPPSFGSGPALVRGVNVKRDKGVSKFHIYKILQRKRCKFLFLGVAGSCSADIKE
NQNQNLDNLLYKAGVVAGAGAGQPPGTGQPPGAGQPPGRKRPLEDGANGRTPSRYKPKRR
KTAAGPVPPKNALVRLNEVRPGLQYRLLSQTGPVHAPVFVMAAEVNGQVFQGSGPTKKKA
KLIAAEKALQSFVQIPDTSEAHLARIMAAHTDFTSDQADFPNELFNAFERSTPLDDPLGP
LASIHTGSSPSLGSEYQFLLSSGPGRAPKNPIMILNEMRPGLRYEFVSESGESHAKSFTV
SLAVEARRFQGSGRNKRLAKARAAQAALAALFGLGLDRPPSQQPIPGEGRQLHPPQVLAD
AVSRLVIDKFGELTDNFTSPHARRKVLAGVVMTTGSDLRTAQVVCVATGTKCISGEHVSG
RGISGELVSDRGLALHDGHAEVVARRCLVRFLYSQLENVLRIMPRYLTSLPPALRAPAPR
LPPTYRQAKQAALDYQAAKQTLYRAFHRAGLGIWNQKPGDQDRFTGES
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttttctgaatctgaatctgtctccgtcccccagagagtcggagtgcagccgg
ttccaggaggctgtgaagactctgtcctgcagggccgacccgctggttctgatcggggag
acgctgaggaggaggatggaggaagaggaggagggggggcccagatccagaacaataaac
gaaccttcaggtcccatcgtccccccttcctttggttctggtcccgccctggtccgggga
gtaaatgtaaaaagagacaaaggagtgtctaagtttcacatttacaagatcctgcagcga
aaacgttgtaaattcctctttctgggcgtcgcaggttcgtgcagcgctgatatcaaggaa
aaccagaaccagaacctggacaacctcctgtacaaagccggggttgtggccggggccggg
gccggccaaccccccgggaccggccaaccccccggggccggccaaccccccgggaggaaa
cgccccctggaggacggcgctaacggccgcacgccctcccggtacaaacccaagaggcgt
aagacggcggccgggccggtcccgcccaagaacgccctggtgcggctgaacgaggtccgg
cccggcctgcagtaccggctgctgtcccagaccgggccggtccacgcgcccgtcttcgtc
atggccgccgaggtcaacgggcaagtcttccagggctccgggcccaccaagaagaaggcc
aagctgatcgcagcggagaaagctctgcagtccttcgtccagatccctgacacgtccgag
gcccacctggcccggatcatggcggcccacacggacttcacctcggaccaggccgacttc
cccaacgagctcttcaatgccttcgagagatccacccctttggacgacccgttgggtcca
ttggcgtcaattcacaccggttcctccccgtcgttgggatcagagtaccagttcctcctc
tcctccggtcccggacgagcccccaaaaaccccatcatgatcctcaacgagatgcgtccc
ggcctcaggtacgagttcgtgtcggagagcggcgagagccacgccaagagcttcacggtg
tccctggcggtggaggcccgccggttccagggttctggccggaacaagcggctggccaag
gcccgggccgcccaggccgcgctggccgccctcttcggcctggggctggaccggccgccg
tcgcagcagcccatacccggggagggacggcagctgcacccgccgcaggtcttggccgac
gctgtctctcgtctggtcatcgataaattcggcgaactgacggataacttcacatccccg
cacgctcgacggaaggttctggcgggcgtcgtcatgacaacaggttcagacctgcggacg
gcccaggtcgtctgcgttgccacggggaccaagtgcatcagcggcgagcacgttagcggc
cgcggcatcagcggcgagctcgttagcgaccgcggcctggcgctgcacgacggccacgcc
gaggtggtggcgcggcgctgcctggtccggttcctgtactcacagctggagaacgtcctc
agaataatgcctaggtacttgacttcgctcccccccgccctgcgagccccggcaccacgg
ctgccccccacataccgccaagccaagcaggcggcgctggactaccaggccgccaagcag
accctgtaccgggccttccaccgggctgggcttgggatctggaaccagaaacccggggac
caggaccggttcaccggggagtcctga
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