Cololabis saira (Pacific saury): 133425153
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Entry
133425153 CDS
T09849
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133425153 (sox1b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133425153 (sox1b)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133425153
NCBI-ProteinID:
XP_061571818
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Position
24:9411176..9413695
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AA seq
340 aa
AA seq
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MYSIMMETDLHSPAVPQSNPSNPGGPAGKVPQERIKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLGSPAGVMGGQRLESPVGGHGAGAGYATHVNGWANGTYSGQVAAAAAAAHAMMQE
AQLAYTQHPGGAHPHHGHHHPHHHPHNPQPVHRYDMGALSYSPISNSQSYMSASPPGYGG
ITGYTHPHQGSGASPVSGALGGSLGGTLGSLVKSEPSVSPPVSSARALPPCAPGDLRDMI
SMYLPAGEAAGDAQGRLHVLHPQHYQAGSAPAGTVPLTHI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacctgcattcccccgcggtgccccagagcaaccca
tccaacccggggggccccgcggggaaggtcccgcaggagcgcatcaagagacccatgaac
gccttcatggtgtggtcccggggccagcgcaggaagatggcccaggagaaccccaagatg
cacaactctgagatcagcaagagactgggcgcggagtggaaggtgatgacggaggcggag
aagaggccgttcatcgacgaggcgaagcggctgcgggccatgcacatgaaggagcacccg
gactacaagtaccggccccgcaggaagaccaagacgctgctgaagaaggacaagtactct
ctggccggcgggctgctgggctcccccgccggggtgatgggcggccagcggctggagagc
ccggtggggggccacggggccggggccggctacgccacgcacgtcaacggctgggccaac
ggcacgtactctggacaggtggcggccgcagccgccgccgcgcacgccatgatgcaggag
gcgcagctggcgtacacgcaacacccgggcggcgcgcacccgcaccacggccaccaccac
ccgcaccaccacccgcacaacccgcagcccgtgcacaggtacgacatgggcgcgctgtcc
tacagccccatctcgaactctcagagctacatgagcgcgtccccgccgggctacggcggc
atcaccggctacacgcacccgcaccagggctccggcgcatccccggtgtccggggccctg
ggggggtccctggggggcaccctggggtccctggtcaagtcggagcccagcgtcagcccc
ccggtgtcctcggcgcgggcgctgccgccgtgcgccccgggagacctgcgggacatgatc
agcatgtacctgccggccggggaggcggcgggggacgcgcagggccggctgcacgtcctg
cacccgcagcactaccaggccggctccgcgccggccgggacggtgccgctcacgcacatc
tga
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