Cololabis saira (Pacific saury): 133425173
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Entry
133425173 CDS
T09849
Symbol
als2b
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133425173 (als2b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
133425173 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
RCC1_2
MORN
VPS9
PH_alsin
Alsin_RLD
HA_Alsin
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
133425173
NCBI-ProteinID:
XP_061571851
LinkDB
All DBs
Position
24:3599656..3636954
Genome browser
AA seq
1678 aa
AA seq
DB search
MEETKRKSSGEDCGERGLLHAWKGYSCSITPERLHLPRPVLQVALGSRHGVLLLEGGQVY
SFGALSWKQSQTSEAGEPVLESALSGQRVLAVAAGSLHSGAVTEDGGVHMWGDNSAGQCG
LSALATVSNPTPVALLDSDGGAVQTVPVLELACGEKHTLALSAQRELWAWGSGCQLGLNA
SIFPIWKPQKVELLAGRSVLQVACGASHSLALVRCPGPQELHRPPVDKCTQCNQLLYTMT
DKEDHVIISDGHCCPLGVEPTEEEDRLETPAPSSLKTSPSEPVLPSQSGSNSPAPAAAAD
ASDASQTRESEGREKSLANGVHPAPDPDASAQSKGAGVKSSPYPDERAVKEYLRKLSDSS
QVDTKTGALHALLPSSGGPGSSTLNSLVASCASAVGERVASTYEALSLKKMMNFYLPSGA
ARPGCSDGVVVGDTSAERVRQEDSMQGKKSSSTGDIHEEEAEGVRRRLSLPGLLSQGRYA
VHLLSSSYTVLLSPRLLRKAGRPRIRALPLTPMGGGVPEDKEVFPTLQTEVWSWGHGEHG
QLGHGDNLARLQPLCIKSLNNKEVIRVVAGAHHSLALTAQSQVFSWGRNSSGQLGHMETP
STVPRLAKLSEGIRVWDASAGERHTVLLADGDCIQPILYYSGEQVKGGEPGRRDGGETEE
QQTGGTQQPVLLPFCMNLGYVSSVFAGGQRCMAQSDRNVMGFIASFHELASAERKFYCKL
CDVKSQIVRPLLELESLSSALGPASFALLQTLAGQFSLLCHVTGQHAASLTANLRRGRDV
QSLLILDHASIFLDSYNDYCSAVGNFQVMGGFHALTKPSLDLFGKSPELLQRLSECSEEN
AAAAELLVALFYLPLGHLHEYGRLLLKLATCFEVSSSDYQKLQDNCSKFEALTVQLKRKR
KEADYTFHFWKSFPGKMTDSLRKPQRRLICESSNKALTLQNAGRFSVNWFILFNDALVHA
QGVAPCKNLFSTHHIFPLTTLWVEPVSEEDTGVHGLKVITPEETLTLLASAPMEKTKWLR
AINQAVDQALSGAGQEITSAGSGLKSEPPLSRTASYTFYRDGRLKEGKYEGRWLAGKPHG
RGVLKWPDGRVYTGMFKTGLEDGFGEFVCPNKMFSKNDHYQGHWKEGRMHGLGTYRYASG
EVYDGSFQDGVRHGHGMLRSGKLNTSSPSVFIGQWLQDKKSGYGVFDNITKGEKFMGMWQ
DHLRQGTGVVVTQFGLYYEGNFKDNKMLGTGILLSEDDTAYEGEFSDDWTLTGKGVLTMA
NGDYFEGSFSGEWGSGLKVTGTYFKPHLFDTDKDKPRVVKLGRLCVSAEEKWDAVFEECW
RQLGCEGAGRGEHWKAWENVAVALSASQQHIRDSPEKLSRSQSKILESLEVIPQHVGPMT
MERYGSIRLYLIQACDTPLHPLGRLVETLVAVYRMTYVGVGANRRLLPQAVNEIKSYLNR
IFQIVRFLFPDVPEEGGLIPEPTASVQDKQEPESADAPLDSPKPGRVVSSSALLLPVLLP
RLYPPLFTLYALEKEKEDDVYWECVLRLNKQPDLALLAFLGVQQKFWPVSIPASLLTPGE
KQMVISSTKDACFASAVETLQQISTTFTPSDKLQVIQLTFEEITQEVQSLLQQDFLWSMD
ELFPVFLYVVLRARIRNLGSEVSLIEDLMDPCIQHGEHGIMFTTLKACYYQIQHEKVT
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaccaagaggaagagctctggggaggactgtggggagcgcggcctcctccac
gcctggaagggctactcctgcagcatcaccccggagaggctgcacctccctcggcccgtc
ctccaggtcgccctgggctccaggcacggcgtgctgctgctggaaggaggacaggtgtac
agttttggagcgttgtcatggaaacagagccagacatcggaggcgggggagccggtcctg
gagagcgccctgagcgggcagcgggtgctggccgtggcggccgggagcctgcacagcggg
gcggtgacggaggacggcggcgtccacatgtggggggacaacagcgcgggccagtgcggc
ctgtcggctctcgccaccgtctccaaccccacgcccgtggctctgctggactcggacggc
ggcgcggtgcagacggtgccggtgttggagctggcctgcggggagaagcacacgctggcg
ctgtcggcccagcgggagctgtgggcctggggcagcggctgccagctcggcctcaacgcc
agcatcttccccatctggaaaccccagaaggtggagctcctggccgggaggtccgtcctg
caggtggcctgcggggcgtcccacagcctggccctggtgcgatgccccggcccgcaggag
ctccaccgcccgcccgtggacaaatgcacccagtgtaaccagctgctctacaccatgacg
gacaaggaagaccacgtcatcatctcggacggccactgctgcccgctcggcgtggaaccc
accgaggaagaggacaggctggagacgccggctccctccagcctgaagacatccccctct
gagccggtgctcccgtcccagtccggctccaactcccccgccccggctgcagccgccgac
gcctctgacgcctcccagacccgggagtctgaaggaagagagaagtctttggcgaatggc
gtgcacccggcccctgacccggacgcctcggctcagtccaaaggtgccggcgtcaagagt
tccccgtacccagacgagcgggcggtgaaggaatacctgaggaagctgtcagacagctcg
caggtggacaccaagactggagcgctgcacgctctgctgccgtcatccggaggccccggc
tcctccaccctcaacagcctggtggcgtcctgcgcctcggcggtgggcgagcgggtcgcc
tccacctacgaggccttgtctctcaaaaagatgatgaacttctacctgccgtcgggcgct
gcgaggcctggttgctcggacggggtcgtagtgggggatacctccgctgagcgcgtccgc
caggaggactcgatgcaggggaagaagagctccagcacgggggacatccacgaggaagag
gcggagggtgtgcggcgccgcctgtcgctgccaggactcctctcacagggtagatacgcc
gttcacctcttatcctcctcctatacggtgctgctttcgccgcggctgctgaggaaagcc
ggtcgcccccggatacgagccctccccctcaccccgatgggagggggggtccccgaggac
aaggaggtgttccccaccctgcagacagaggtgtggagctggggacacggcgagcacggc
cagctgggccacggagacaacctggccaggctgcagccgctctgcatcaagagcctgaac
aacaaggaggtgatccgggtggtggccggcgcccaccattccctggccctgacggcacag
tctcaggtgttctcgtggggcagaaacagctccggtcagctgggacacatggagactccc
agcacggtcccccgcctcgccaagctgtcggaggggatccgggtctgggacgccagtgcc
ggggagagacacaccgtcctgctggcagacggagactgcatccagcccatcctctactac
agcggggagcaggtgaaggggggggagcctggccggcgggatggaggagagacggaggag
cagcagacgggaggcacccagcagccggtcctgctgcctttctgcatgaacctgggttac
gttagcagtgtgttcgctggcggccagaggtgcatggcgcagtcagataggaatgtaatg
ggcttcatcgctagcttccacgagctggcgtcagcagagaggaagttctactgcaagctg
tgcgacgtcaagtctcagatcgtgcgcccccttctggagctggagtctctgagctcggcg
ctcggcccggcgtccttcgcgctcctgcagacgttggcaggtcagttcagtcttctgtgt
cacgtgaccggccagcacgccgccagcctcaccgccaatctgcgccgtggccgcgacgtc
cagagtctgctcatcctggaccacgccagcatcttcctcgactcctacaatgattactgc
agcgctgtgggaaacttccaggtgatgggcggcttccacgctctcactaaaccatctcta
gacctctttgggaaaagtcctgagttgctgcagaggctgtcggagtgcagcgaggagaac
gctgccgcagccgagctcctggtagcgctcttttaccttccgctcggccaccttcacgaa
tacggccggctgctgctcaaactggccacctgcttcgaggtgagctccagcgactaccag
aaactgcaggacaactgctccaagttcgaagctctgaccgtccagctgaagaggaaaagg
aaagaggccgactacacctttcacttctggaagagcttccccggcaagatgacggactcg
ctccggaagcctcagcgccggctgatctgcgagagcagcaacaaggccctgaccctgcag
aacgccggcaggttctccgtcaactggttcatactcttcaacgatgctctggtgcacgcg
cagggcgtggcgccttgtaagaatcttttctccacccatcacatcttccctttaaccacg
ctgtgggtagagccggtctccgaggaggacactggcgtacatgggttaaaggtgatcact
cctgaggagacgctgactctcctggcctcggctcccatggagaagaccaagtggcttcgc
gccatcaaccaggcggtggatcaggccctgagcggggcgggacaggagatcacgtcagcc
ggctcggggctgaagtcggagcctcccctctccaggacggcttcctacactttctacaga
gacggacgactgaaggagggcaaatacgaaggtcgctggcttgccggcaagccccacggc
aggggagtgttgaaatggcctgacgggagagtttacaccgggatgttcaagacgggactg
gaggacggctttggagaatttgtttgtcccaacaagatgttcagcaagaacgatcactat
cagggccactggaaggagggcaggatgcacggcctggggacgtaccggtatgccagtggt
gaagtctacgacggctccttccaggacggcgtgcggcacggccacggcatgctgcgcagc
ggcaagctcaacacctcctcccccagcgtcttcatcggccagtggctgcaggacaagaag
tcgggttacggagtctttgacaatatcaccaaaggagagaagttcatgggcatgtggcag
gaccacctgcggcagggcaccggggtcgtcgtcacccagtttggtctctactacgaagga
aatttcaaagacaataaaatgctgggcactgggattcttctctcagaggacgacacagcg
tacgaaggcgagttttctgacgactggaccctcactggaaagggtgtgctgaccatggcc
aacggcgactactttgagggctccttcagtggcgaatggggctccggcctcaaagtgacg
ggcacttactttaaaccgcatctgttcgacaccgacaaggacaagcctcgagtcgtgaaa
ctgggccgcctgtgcgtgtctgcggaggagaagtgggacgccgtgttcgaggagtgctgg
aggcagctgggctgcgagggagcgggacgaggagagcactggaaggcctgggagaacgtc
gccgtggccctcagtgctagccagcagcacatacgggacagtccggagaagctgtctcgg
agtcagagtaaaatcctggagagtctggaggtcatcccgcaacacgtaggacccatgacc
atggagagatacggcagcatccggctctacctcatccaggcgtgcgacacccccctgcac
ccgctgggccggctggtggagaccctggtggccgtctacaggatgacctacgtgggcgtc
ggcgccaaccgccgactcctgccgcaggctgtcaacgagatcaagtcctacctcaaccgc
atcttccagatcgtcagatttctgttcccagacgtgccagaagagggcggtctcatcccc
gagccgaccgccagcgtccaggacaagcaggagccggagtctgccgacgcccccctggac
tcgcccaaacccggccgcgtggtgagcagctcggctctgctgctgcccgtcctgctgccg
cgcctctacccgccgctcttcaccctctacgccctggagaaggagaaggaggacgacgtg
tactgggagtgcgtcctgcggctcaacaagcagcccgacctggccctgctggccttcctg
ggcgtgcagcaaaagttctggcccgtttccatcccagcgtctttgctgacaccaggggag
aagcagatggttatttccagcactaaagacgcttgctttgcctctgcggtggaaacgctg
cagcagatcagcacgacgttcaccccgtcagacaagctgcaggtgatccagctcaccttc
gaggagatcacacaggaggtccagtcgctgctgcagcaggacttcctgtggtccatggac
gagctcttccccgtcttcctctacgtggtgctgcgagctcgaatcaggaacctggggtcg
gaggtgagcctcatcgaagacctgatggatccctgcattcagcacggcgagcacgggatc
atgttcaccaccctcaaggcctgctactaccagatccagcacgagaaggtcacataa
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integrated database retrieval system