Cololabis saira (Pacific saury): 133425211
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Entry
133425211 CDS
T09849
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133425211 (gtf3c3)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
133425211 (gtf3c3)
TFIIIC, fungi type
133425211 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_19
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_12
ANAPC3
TPR_Slam
HAT_PRP39_C
Sel1
HAT_Syf1_CNRKL1_C
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
133425211
NCBI-ProteinID:
XP_061571909
LinkDB
All DBs
Position
24:19760815..19784322
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AA seq
943 aa
AA seq
DB search
MSGFSSELIEYLEGRITFEEFDRRRGDRKAEESGAVAEDVENNAEPSTSEQALSKIEEGV
SPGVQLAFSSILRETADLPSSEEEEKEEEEDTLSFVDDENDEDYNAEDDMGRKAKTEERE
KRRRVRGGRKRVSRKKKLSRAEEDAEDAEDAEDAEDLTVGDVFALEMELNRENKKFMKGR
RHGSKLPQALRGLMGEANIRYARGEKDDAILMCMEIIRQAPLAYEPFSTLAMIYEDNEDM
NKALQFGLIAAHLNPSDCEEWIRMAEMSLEQDNIRQAIICYSKAIKYDPTNVRYLWERSS
LHMRLGEHRQCMDGYRRILSLLPMEDGEHFMQLSKDMAKSYYESNDLPAALSVIEEALSR
HPTLVSDDMINMAAELYISNHQYNEAMQVLVRFAGIVLITGNSEHATQQHEEEVTKEQEE
TDEDGTKSSTTEEMAAVENCEVPDSVPVDLKAKLIVCLIHLNVFMPLEGLVSSLMEQSPE
EIGDLYLDIGEAFLEKGEYMSALPLLSALIITDKYNLAVVWLRHAECLKALGHMEAAADS
YTKVVQMAPQHLEARLSLATLQQQLGRMDCALKALESMYDSDILAQDSSAAQKELKLLLH
RSTLLKAQGQKQDYLDAMITMISMLLKVAMQRAKVCVSSVILSGENHLRLVKVEDMLPEI
ADHETAYLDNTGKTNVLSKEDWWQLLVSCVLMLCEVKRYTEAELLVESAMEFYSFYDNKP
RRKELEFFGLSATILDHNYYKAYNYIRLMLMENVNLPQLWNVFNQLTITSQHQRHHRFCL
RLLLKHPDNHALCVLCGHNAMVSGSFKHALGQYVQALQTHPDNPLHSLCVGLTFFHMASQ
KYVAKRHALVLQGFSFLWQYVQLRGECQESMYNLGRALHQMGLAHLAIHYYQKALKLPAH
KLDGIMDHQVDLKMEIAFNLSLIYQASGNMRMAQELIKTYCVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttcagttctgagttaatcgagtatttggaaggaagaataacttttgaagag
ttcgaccggagaagaggagaccggaaagccgaggagtcaggagcagtagcagaagatgtt
gaaaacaacgctgaaccctccacctcggagcaagcgctgtcaaaaattgaggaaggagtc
agcccaggagtccagctggccttctcttccattctgagagaaactgcagacctgccatcg
tcagaggaagaggagaaagaggaggaggaagataccctgagctttgtcgacgatgaaaac
gatgaagactacaatgcagaggatgacatggggagaaaggcgaagactgaagagagagag
aagaggcgacgggtgagagggggaagaaaaagggttagcaggaaaaaaaaactgtcccgg
gcagaggaggatgcagaggatgcagaggatgcggaggacgcggaggatttgacagtagga
gacgtgtttgccctggagatggagctgaaccgagaaaataaaaagtttatgaaggggcgt
cgtcatggcagcaagctgcctcaggctctcaggggcctgatgggagaagccaatattcgc
tatgcaaggggagaaaaggacgatgccatcctgatgtgtatggaaatcataagacaggct
cccctggcctatgagcctttttcgacgttggccatgatttacgaggataacgaggacatg
aacaaagcgctccagttcggcctcatcgccgcccacctcaacccctccgactgtgaggag
tggattcgaatggctgaaatgtctctggagcaggacaacatccgacaagccatcatttgc
tacagcaaagctatcaaatacgaccccaccaacgtgcggtatctgtgggagcgctccagc
ctccacatgcgtttgggggaacacagacagtgcatggacggttaccgcaggatcctgtct
ttgctcccaatggaagatggagagcacttcatgcagctctccaaggacatggccaaaagt
tactacgagagcaatgacctgcctgcagccctaagtgtgattgaagaagctttgtcaaga
catcccaccttggttagtgacgacatgatcaacatggcagcagaactgtacatttccaac
caccagtacaacgaggccatgcaggtcttggtccgatttgcaggtattgttttaattaca
ggaaattcggaacatgcaacacaacagcatgaagaggaagtgaccaaggagcaagaggag
acggatgaagacggcacaaagtcaagtaccactgaagaaatggcagcagtggaaaactgt
gaagtaccagacagtgtcccagtggacctgaaggccaagcttatcgtctgcctcatacac
ctgaacgtctttatgcctctggaaggcttagtttcctcactgatggagcagagtccagag
gagattggtgacttgtacctggacataggtgaagctttcctcgagaagggagagtacatg
tctgctctgcctttactgtctgccctcatcataacggacaagtacaatctagctgttgtt
tggctccgacatgcagagtgtctgaaagctctgggtcacatggaggctgcagcagacagc
tatacgaaggtcgtgcagatggcaccgcagcacctagaggcccggctctccctcgccact
ctgcagcagcagctgggtcggatggattgtgctctgaaagcgctcgagtccatgtacgat
agtgacatattggcacaagattcatcagctgcacagaaggaattaaagcttctgctgcat
cgctccacactgctgaaggcacagggccagaagcaggactacctggatgctatgattacc
atgatttcaatgctgcttaaggtggccatgcaacgggctaaggtgtgtgtgagttctgta
atcctgtcaggagagaatcaccttaggttggtcaaagttgaggacatgctgccagagatt
gctgaccatgaaacagcttacctggataatacaggtaaaaccaatgttttgtccaaagag
gactggtggcagctcctggtgagctgtgtgctgatgctgtgtgaggtgaagcgctacacg
gaggccgaactcctcgtggagtcggccatggagttctactccttctatgacaataagcct
aggaggaaagaactggagttttttggcctgtctgccaccatccttgaccacaactactac
aaggcctacaactacatcagattgatgcttatggaaaatgttaatctgcctcagctttgg
aatgttttcaaccagctgacaatcacctcccaacatcagcgtcaccaccgcttctgtttg
cgtctactgttaaaacatcccgacaaccacgccttgtgtgtcctctgcggacacaatgcc
atggtgtcagggagcttcaagcatgctttgggccagtatgttcaagccttacagactcac
cctgacaacccgttgcacagtctgtgtgtgggtctcacattcttccacatggcatctcag
aaatatgtagcgaaacggcacgcactggtgctgcagggtttctccttcctgtggcagtat
gtgcagttgcgcggagagtgtcaagagagtatgtacaacttgggccgagcgctgcaccag
atgggcctcgcacatttagccatacattactaccaaaaggcccttaaactacctgcacat
aaattggatggcatcatggaccatcaagttgatctgaagatggagattgcttttaacttg
tcacttatctaccaggccagtgggaacatgaggatggcccaggagcttattaaaacatat
tgtgttgtttga
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