Cololabis saira (Pacific saury): 133425231
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Entry
133425231 CDS
T09849
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133425231
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133425231
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133425231
NCBI-ProteinID:
XP_061571950
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Position
24:complement(22702182..22735018)
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AA seq
1318 aa
AA seq
DB search
MDQTEDLEVGDPPSGDPPSGDPSSGPSLPGEDQGLAAQRIRPGPGPGPGTGPGPGPGPGP
EPRPGPGPGSSESVCSNRSMEPPLRFQSESRIGPGPESGPEPEPGPSCVSLKSDQSKEYI
LNFGKAELSPAQSFSQRDSPGPGPGPGPGPGPGPGPGPGPGPGPSCASVKSDHSKEIIIQ
FKGDRPPAAKRRKVESPESASSLVKSSVHREHGPRQVPRTPEQQMSEPPSGPSVQQHQPD
LEPIFTTLEENIITFVKKELKKTKKLLSGDYPEHLEDEGEQQTTSNRESFLKITLDFLRR
MNQEQLAERLQSNTSAAVCQQNLRSKLKEKFQFVIEGIVTAGKPILLNEIYTELDITEGG
TGEVNKEHEVRQFQKKSRKPETTIRQEDIFKLPPGRSKPIRTVMTKGVAGIGKTLLTHKF
TLDWAEGRTNQDIQLLFPFTFRELNVLKGSNISLVELVHLFFTETKGICKFEEFQVAFIF
DGLDECRLPLDFRNNAVLTDVTESTSMDVLLTNLIRGKLLPSARLWITSRPAAANQIPPD
CVDMVTEVRWFTDPQKEEYFRKKLKDKKQANKIISHIKTSRSLHIMCHIPVFCWITATVL
EKVLETRDGAELPTTLTEMYIHFLVVQAKLKKVKYDGGDETDPHWSPESRKMIKSLGKLA
FEQLQKGNLIFYESDLRECGIDVREASVYSGVFTQIFREESGLYKDKFFCFIHLSVQEFL
AALHVHLTFINSGINALTEEQTKSETTGDDSAETHFYQTAVDKALQSQNGHLDLFLRFLL
GLSLQENQILLHGLLKPKRRSQNNQETIEYIKRRTSEDLSAESIINLFHCLNELNDRSLE
EEIQQSLRSGRLSTDKLSPAQWSALVFILLSSGEDLEVFDLKEYSSSEEALLRLLPVVKA
SKKALLGGCNLSERSCESLSSVFSSQSSKLRDVDLSNNDLQDSGAKLLSAGLESPHCKLE
NLKSVIIKSLKLLYYISTSFVIRVSCTVCVLKMFVSFINVPCVLVQYYTFRLNICNLSGT
SCEVLSSPLSSPSSSLKELDLSNNDLQDSGLKLLSFGLESPHCRLETLRLSGCLVTEEGC
TSLVSALTSNPSHLRELDLSYNHPGESAVKHLSAGLEDPTWRLETLKVDPAGERWLSPGL
RKYSSELTVDTNTVNKHIKLSHNNGMLTFVDEDQSHPDHPDRFDERPQLLCRDALTGRCS
WEVQWRGRVEVALSYRGIRRKGDLIDCQFGGNNQSWSLSCSESNCYSVWHNGRKHSSSTF
PSSHRVVVYVDCPAGALSFYEVSSDALIHLHTFNTTFSEAVCPGFRVLRDSSVSLSSE
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggaccagactgaggacctggaggtgggagaccccccttctggagaccccccctctgga
gacccctcctctggaccatctctgcccggggaagaccagggtctagccgctcagaggata
agacccggacctggacctggacccggaaccggacctggacctggacctggacccggaccc
gaacccagacctggacccggacctggatccagcgagtctgtgtgtagtaatcgctccatg
gagcccccgctgcggttccagtcagaatcacggattggacctggaccagaatctggacct
gaacctgaacctggacccagctgtgtctccttgaagagcgaccagtcaaaggaatatatt
cttaattttgggaaggctgaactttctcctgcacagagtttcagtcagagagactcccca
ggacctggacctggacctggacctggacctggacctggacctggacctggacctggacct
ggacctggacccagctgtgcgtccgtgaaaagcgaccactcgaaggagattattattcag
tttaaaggagaccgacctcctgcagcgaagaggaggaaggtggaaagtcctgaatcggcc
tcttctctggtgaagagcagcgtgcatcgtgaacatggaccgcggcaggttcccagaaca
ccggagcagcagatgtcggagcctcccagtggtccgtctgtccagcagcatcagccagac
ctggagcccatattcacgacgctggaggagaacatcatcacgtttgtgaagaaggagctc
aagaagaccaagaagcttctgagtggagattacccagagcatctggaggacgagggagaa
caacagacgacgagtaacagagagtcatttctgaagatcactctggacttcctgaggaga
atgaatcaggagcagctggcggagcgtctgcagagcaatacctctgctgcagtttgtcaa
caaaacctcagatctaagctgaaggagaagttccagtttgtgattgaagggattgttaca
gcaggaaagccaatccttctcaatgagatctacacggagcttgacatcacagagggagga
accggagaggtcaataaagaacatgaagtcagacagttccaaaaaaaatccaggaaacca
gaaacaaccatcagacaagaagacatctttaaacttccgcctggaagaagtaaaccaatc
agaacagtgatgacgaagggagtggctggcatcggaaaaacgctcttaacacataagttc
actttggactgggctgaaggcagaaccaaccaggacatccagttactgtttccattcacc
ttcagagaactgaatgtgctgaaagggagcaacatcagtttggtggaacttgttcatctg
ttcttcactgaaaccaaaggaatctgcaaatttgaagagttccaggtcgcgttcatcttt
gacggtctggatgagtgtcgacttcctctggacttccgcaacaatgcggttctgactgat
gttacagagtccacctccatggacgtgctgcttacaaacctcatcagagggaaactgctt
ccttctgctcgcctctggataacatcacgacctgcagcagccaatcagatccctcctgac
tgtgttgacatggtgactgaagtcagatggttcactgacccacagaaggaggagtacttc
aggaaaaaattgaaggataagaagcaggccaacaagatcatctcccacatcaagacatca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctactgtcctg
gagaaagtcctggagaccagagacggagcagagctacccacgaccctgactgagatgtac
atccacttcctggtggtccaggccaaactgaagaaggtcaagtatgatggaggagatgag
acggatccacactggagtccagagagcaggaagatgatcaagtctctgggaaaactggct
tttgagcagttgcagaaaggaaacctgatcttctatgaatcagacctgagagagtgtggc
atcgatgtcagagaggcttcagtgtactcaggagtcttcacacagatctttcgagaagaa
agcggcctgtacaaggacaaattcttctgcttcatccacctgagtgttcaggagtttctg
gctgctcttcatgtccatctgaccttcatcaactctggaatcaatgcgctaacagaagaa
caaacaaaatctgaaactacaggtgatgattctgcagagacacacttctaccagactgct
gtagacaaggccttacagagtcaaaacggacacctggacttgttcctccgcttcctcctg
ggtctttccctgcaggaaaatcagattctcctacatggtctgttgaaaccgaaaagaaga
tcacagaacaatcaagaaacgattgagtacattaagaggagaaccagtgaggatctgtct
gcagagagtataatcaacctgttccactgtctgaatgaactgaatgatcgttctctagag
gaggagatccaacaatccctgagatcagggcgtctctccacagataaactgtctcctgct
cagtggtcggctctggtcttcatcttactgtcatcaggagaagacctggaagtgtttgat
ctgaaggaatactcatcttcagaggaagctcttctgaggctgctgccagtggtcaaagcg
tccaagaaagctcttctgggtggctgtaatctctcggagagaagctgcgaatctctgtct
tcagttttcagctctcagtcttccaagctgagagatgtggacctgagtaacaacgacctg
caggattcaggagcgaagcttctgtctgcaggactagagagtcctcactgtaaactggaa
aatttgaagtcagtaatcataaaatccctcaaattattgtattacatttctacttccttt
gtgataagagtctcatgtactgtatgtgttctaaagatgtttgtcagttttataaatgtc
ccttgtgttcttgttcaatattatactttcaggctaaacatctgtaacctctcagggaca
agctgtgaagttctgtcctcacctctcagctccccgtcatccagtttgaaagaactggac
ctgagtaacaacgacctgcaggattcaggactgaagctgttgtcctttggattggagagt
ccacactgtcgactggaaactctcaggctgtctggttgcttggtcactgaggaaggatgt
acttctctggtctcggctctgacgtccaatccctcccacctgagagagctggacctgagc
tacaaccatccaggagagtcagcagtgaagcatctgtcagcaggactggaggatccaacc
tggagactggaaactctcaaggtggatcctgctggagaacgatggttgagtccaggtctg
aggaagtattcctctgaactcaccgtcgacaccaacaccgtcaacaaacacataaagctg
tcccacaacaacgggatgttgacctttgtggacgaggaccagtcccatccggatcaccca
gaccggtttgatgagcggccgcagctgctgtgcagagacgctctgaccggtcgctgctcc
tgggaggtccagtggagaggacgggttgaagtagctctgagttacagaggaatcagaagg
aagggggacttgatcgactgccagttcggtgggaacaaccagtcctggagccttagctgt
tctgaaagtaactgctattccgtctggcacaacggcaggaaacactcttcctccaccttc
ccttcctcccacagagtagtggtgtacgtggactgtcctgctggagctctgtccttctac
gaggtttcctccgacgctctgatccacctccacaccttcaacaccacgttctctgaagct
gtttgtcctggatttagagtcttgcgtgattcctcggtgtctctgagttcagaatag
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