Cololabis saira (Pacific saury): 133425266
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Entry
133425266 CDS
T09849
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133425266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133425266
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133425266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
133425266
NCBI-ProteinID:
XP_061572003
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Position
24:complement(23861090..23876314)
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AA seq
297 aa
AA seq
DB search
MLATGAAVSSALAQVDREKIYLWINELSGPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSITPPTLTAHQSNRVCNALALLQCVASHPETRSAFLSAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SRAREALRQCLPDQLKDSTFETVLKDDGTTKRWLAQLVKNLQEVPVTDPRGVVLPGQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgacgggagcggcggtgagctctgctctggcccaggtggaccgggagaaaatc
tacctgtggatcaacgagctgtcggggccggagacgagagagaacgctctgctggaactc
agcaagaaacgggagagtgttccggacctggcgcccatgctgtggcactcgtgtggaacc
atcgccgcgctgctgcaggagatcgtcaacatctacccgtccatcactccccccactctg
acggcccaccagtccaaccgggtctgcaacgccctggccctgctgcagtgtgtagcctca
caccccgagaccaggtcggcgttcctgtcggcccacatccctctcttcctctacccgttc
ctgcacacggtcagcaagacccggcccttcgagtacctgagactcaccagcctgggcgtc
atcggggccctggtgaagacggatgagcaggaggtgatcaacttcctgttaaccaccgag
atcatccctctgtgtctgaggatcatggagtccggcagcgagctgtccaagacggtggcc
accttcatcctgcagaagatcctgctggacgacacgggcctggcttatatctgccagacc
tacgaacgcttctcccacgtggccatgattctggggaagatggtgctccaactctccaag
gagccgtcggctcggctgctcaaacacgtggttcgctgttacctccgtctgtccgacaac
tccagggcccgtgaagctctgcgtcagtgtctcccggaccagctgaaagactccacgttt
gagacggttctgaaggacgacggaaccaccaagcgctggctggcccagctggtgaagaac
ctgcaggaggttccggtgaccgacccgaggggggtggtgctgccgggccagtga
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