Cololabis saira (Pacific saury): 133425283
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Entry
133425283 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: runt-related transcription factor 1-like
KO
K08367
runt-related transcription factor 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133425283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133425283
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
133425283
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
133425283
NCBI-ProteinID:
XP_061572022
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Position
24:complement(23357999..23388934)
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AA seq
459 aa
AA seq
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MVFLWDKYDPAPGRRYTPPSTSLGSGGKMEALPLGAQEAGGPALVGKLRMAERGMVEVVS
EHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVAMGDVPDGTLVTVMAGNDENFSAE
LRNATAALKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGPREP
RRHRQKLDEVKPGSLAFSERLTELETLRRSSMRATPPHHHHQNHNAGRQPGGPFSGPAQI
TADSRQIQSSPSWSYDQSYPYLGQIATPTVHSANPLSPGRSSLGDLSSRLSGPDLAAFGD
PRVSLDRPFSSLPPLPESRFPDPRVHYPPPAAAFSYNPPHSSVGITMATAMASTPGGRYH
TYLPPPYSASGPHQAQGGPPYHLYYSSATGSYQFSMXGGGGPGPSPPRILPPCTNASTGS
ALLHPSLPNQSEGVGVEAEPSHSSSPSNMGGAEAVWRPY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggtttttctgtgggacaaatacgaccccgcccccggccggcgctacacccccccctcc
acgtcgctgggctcgggggggaagatggaggccctgcccctgggggcccaggaggccggc
gggccggccctggtggggaagctacgcatggcggagcgcggcatggtggaggtggtctcg
gagcacccgggggagctggtgaagactgacagtcccaacttcctgtgctcggtgctgccc
acgcactggaggtgcaacaagacgctgcccatcgccttcaaggtggttgccatgggcgac
gtcccagacggcaccttggtgacggtgatggcagggaacgatgagaacttctcagcagag
ctacgtaacgccacggcggcgctgaagaaccaggtggcccggttcaacgacctgcgcttc
gtgggccggagcgggagagggaagagcttcaccctgaccatcacggtgttcaccaacccc
ccccaggtggccacgtaccagagggccatcaagatcaccgtggacgggcccagagagcca
agacgtcaccggcagaagctggacgaggtgaaacccgggtcgctggccttctccgagcgg
ctgacggagctggagacgctgcgccggagctccatgagggccacgcccccccaccaccac
caccagaaccacaacgccggccgccagcccggcgggcccttctccggccccgcccagatc
accgccgactcccggcagatccagtcctccccctcctggtcctacgaccaatcgtatccc
tacctgggccagatagccacgcccaccgtccactcggccaatccgctgtctccgggccga
tcctcgctgggagacctgtcgtcccggctctcagggccggacctggcggccttcggggat
ccccgcgtgtccctggaccggcccttcagctcgctgccgcccctgcccgagtcccggttc
ccggacccgcgggtgcactacccccccccggcggccgccttcagctacaaccccccgcac
agctccgtgggcatcaccatggcgacggccatggcctccacgccggggggccgctaccac
acctacctgcccccgccctactcggccagcgggccccaccaggcccagggcggccccccc
taccacctgtactactccagcgccaccggctcctaccagttctccatgnngggggggggg
ggcccgggcccctcgccccccaggatcctgcccccctgcaccaacgcctccacaggctcc
gccctcctgcacccgtcgctgcccaatcagagcgagggggtgggggtggaggcggagcct
agccacagctcctccccctccaacatggggggggccgaggccgtgtggaggccctactga
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