Cololabis saira (Pacific saury): 133425346
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Entry
133425346 CDS
T09849
Symbol
mcf2la
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133425346 (mcf2la)
Membrane trafficking [BR:
csai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133425346 (mcf2la)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
CRAL_TRIO
PH_10
Spectrin
Spectrin_SESTD1
hSH3
Motif
Other DBs
NCBI-GeneID:
133425346
NCBI-ProteinID:
XP_061572131
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All DBs
Position
24:complement(9635486..9685057)
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AA seq
1158 aa
AA seq
DB search
MALNRVSQLCHDITRLWLQLKMITDDLMQKEDSPVCAAEIGSELQKQFAILPGGRASNGS
PVVVFPEYPAFSELEEEELQNVLGYLTSLPSAAASGVGFILVIDRRQDRWAAVRATLHRI
AGSFPRILDLVLVLRPTTLFQRTLSDFLFKFNKDEFKMKVVMLSSVTELHAYIDPGQLTT
DLGGTQEYCHDSWISHRTAIEAFALMVKTTAQTLQAFGTELAETELPNDAEATTTLLHTH
SLKKDTMKENLQVALSQGGRLLECINEPLQADPEYNMTHDEMENLATVQRLLGQLDETQS
AFEDFWERHCTKLEQCLQLRHFEKHFREVRAQLDVTSERLSGFSEISVSPTHAEHVLREL
SSHEDKACDVMDVALSLASEGDRLIENSHYAEDSIRPKCSELRGVCDEISSILRSKKSLL
LRALELHHALDKATRWCEDGIFLLASQPVDRCQSQDGAEAALQELERYLDTAALHTLTDR
GAICCQYEAVLNSQIRDQIERVFQKQNSVEEMFEKRRVSLKKLAAKQTRPVQPVAPRPEI
KSPLSSPHVERKERRYSADGALCRKTEPPMHNGTTRHASLTEEEENLAVLRRHVMNELLD
TERAYVEELLCVLEGYAAEMDNPAMAHLIPSTLQSKKDILFGNMPEIYQFHKRMFLKDLE
AYTDCPELVGRCFLERMKDLQIYEAYCQNKPRSESLWRQCSDCAFFQECQKKLEHKLGLD
SYLLKPVQRITKYQLLLKEMLKYSKGCDGCGDLQEALSSILGILKAVNDSMHLIAITGYE
GNLSELGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHQKALLFCKRREENGEG
YEKAPSYSFKHSLSMSAVGITENAKGDNKKFEIWCNSREEVFIVQAPTAEIKTAWVNEIR
KVLTQQLKACRDARQLKNSDSVTPSPTSNTSISLSPFRSSGQKNQKKQEEKKAEPSPASD
TNSCSSPKHKDETVTSPTTDRSSVAKKRFTLQGFSNLKSPKAMSPELGSKRHSLKSDPTP
FGFKGWNKASLSADASEENDGYSSGEDPMNSDTEDEVKKLAPGKYTVVSDCDKAGPQELS
VKSGDMVQLIREGEDGQWFVKNLRSSKEGWVAAANLLSLISESKSSQSLSSSDGSVSGNL
STSSSCSETYTSFSDIKP
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaccgagtgtctcaactctgccacgatatcaccaggctgtggctgcagctg
aagatgataacagatgacctcatgcagaaggaggacagtcctgtctgtgcggctgaaatt
ggctccgaactccagaaacagtttgccatcctgccagggggccgagcgagcaacggcagc
cccgtcgtcgtcttcccagagtacccggcattcagcgagctggaggaagaggaactccaa
aatgtgctgggctacctcacaagcctccccagtgccgcagcatcgggagtgggtttcatc
ctggtcatcgaccgacggcaggaccgatgggccgctgtcagagccaccctgcatcgcatc
gcaggttcatttccaaggatcttggacttggttctggtgttgcgtcccactactttgttc
cagcggactctttcagacttcctgttcaagttcaacaaggatgagttcaaaatgaaggtg
gtgatgctgagctcagtgactgagctccacgcgtatatcgacccgggacagctcaccaca
gatctgggaggcacacaggaatactgccacgacagctggatctcgcaccgcaccgctatc
gaggccttcgccctcatggtgaagaccacggctcagaccctgcaagcgtttggaaccgag
ctcgcggagacggagttacccaacgatgccgaggccaccaccaccctgttgcacacacac
agcctgaagaaggatacaatgaaggagaacctgcaggtggcgctgtctcaaggaggccgt
ttgttggagtgtattaatgagcctctgcaggcagatcctgagtacaacatgacgcatgat
gagatggagaacttggctaccgtacagaggctcctgggtcagctagatgaaacgcagtcg
gcctttgaggatttctgggagcgtcattgcaccaagctggagcagtgtttgcagctccgc
cactttgaaaagcacttccgtgaagtgcgtgcccagcttgatgtgacgtccgagcggttg
tcgggcttctctgaaatcagcgtaagccccacccacgccgagcacgtcctccgagagctc
agcagccacgaagacaaggcttgtgatgtgatggacgtggccctgtcgctggccagtgag
ggcgacagactcatagaaaactcccactacgccgaggactccatcaggcccaagtgcagc
gagctgagaggagtgtgtgatgagatcagctccatcctgagaagcaagaagagcctcctg
ctccgggccctggagctccaccacgctctggacaaggcaacgcggtggtgtgaggatggc
atctttctgttggctagtcagcccgtggaccgctgtcagtctcaggatggagctgaggct
gccctgcaagagctggagcgctacctggacacagcggcgcttcacaccctcacggaccgc
ggcgccatctgctgccagtacgaggcggtgctcaactcccagatcagggaccagatagag
cgggttttccagaagcagaactccgtggaggagatgtttgaaaagagacgcgtcagcctg
aagaaactcgccgccaagcagacgagaccagtgcagccggtagccccgagacccgagatc
aagtctccactttcctctccccatgtagagaggaaagagcggagatactcagcagacggt
gccctatgcagaaagacggagcctcccatgcacaacggtacgacgaggcatgcgtctctg
acggaagaagaagaaaacctggcagtgctccggcgtcatgtgatgaatgagctgctggac
acggagagagcgtatgtggaggagttgctgtgtgtcctggagggctacgcggcagagatg
gacaaccctgccatggctcacctcatccccagcaccctgcagagcaagaaggacatcctg
tttggaaacatgccagaaatctaccagtttcataagaggatgtttctgaaggacctggaa
gcgtacaccgactgcccagaactagtgggccgctgctttttggaacggatgaaggacctt
cagatctatgaggcgtactgccagaataaacctcgctccgagagcttgtggagacaatgc
tccgactgtgccttcttccaggagtgccagaagaagctggaacataaactcggcttggac
tcctacctcctcaaacctgtccagagaatcaccaagtaccagctactacttaaagagatg
ttgaagtacagtaaaggctgcgacggctgtggtgacctgcaggaagctctctcctccatc
ctggggatcctgaaggccgttaatgactccatgcacctcattgccatcacaggatacgag
ggtaacctgtcagagctgggccgtctgctcatgcaaggctccttcagcgtgtggacggag
cataagaaaggccacgccaaggtgaaggacctggccaggtttaagcccatgcagcggcac
ctgttcctgcaccagaaggccctgctcttctgcaagaggagggaggagaacggggagggc
tacgagaaagctccctcttacagcttcaaacactccctcagtatgagtgcagtgggaatt
accgagaacgctaaaggagacaacaagaaatttgagatttggtgcaactccagggaagag
gtttttatagttcaggcaccaacagcggagattaaaacggcgtgggtgaacgagatccgg
aaagttctgactcagcagctcaaggcctgcagagatgccaggcagctaaagaactcagac
tcagtcaccccgagtcccaccagcaacacctccatctccctcagccctttccgcagcagt
ggtcagaagaaccagaaaaaacaagaggagaagaaggctgagccgagcccagcctccgac
accaactcatgttcgtcaccaaaacacaaagatgagactgtgaccagcccgaccactgac
aggtcctcagtggctaaaaagcgttttactttacagggcttcagcaatctcaagagtcca
aaagctatgagccccgagctcggctccaaacgccactcgctcaagagtgaccccacaccg
tttgggtttaaaggctggaacaaggcatctctatcagcggacgcctcggaggagaacgat
gggtactccagcggagaggaccccatgaactctgacactgaggatgaagtgaagaagctg
gctccgggaaagtacaccgtggtatcagactgcgacaaggcgggacctcaggagctgtcc
gtcaagagtggagacatggtgcagctaatccgggaaggagaagacggacagtggtttgtg
aagaaccttcgctccagtaaagagggctgggtggcagcagcaaacctcctcagccttatc
tccgagtccaagtcatcgcaatcactcagcagctcagatggcagcgtctctgggaacctc
agcacttcttccagctgcagcgagacctacaccagcttctcggacatcaaaccctga
DBGET
integrated database retrieval system
