Cololabis saira (Pacific saury): 133427116
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Entry
133427116 CDS
T09849
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133427116 (sntb1)
BRITE hierarchy
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133427116
NCBI-ProteinID:
XP_061572423
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All DBs
Position
3:20414917..20454632
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AA seq
552 aa
AA seq
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MAVVAAAGVSGGSGARKSGFLEVLVRERWHKVLVNLGEDALTLSCEEEDDAGNNNDHVHS
NGVTNGSYLDNRNANSNNGPVQAQAVRTAFTDLPERVPEAIANRKRCVKVTKQDVGGLGI
SIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNSVNLRDATHDEAVQALKQAGR
EVTLEVKYMREATPYVKKGSPVSEISWEAPPPESPRPSSPPVTTPFDLPSPPTQPSLSLN
GDRRCIPLKMCYVTRAMTTPDPENRQLELHSPDARHSLVLRCPDQPSALSWFSAMHSVTS
TLAQRALVEVIHNTSKMGIAASKEMRHLGWLAGKTESEKQCWKPVLVVMTEKDLLLYDSF
PRGREAWQSPAHVFPLLATRLVHSGPDRGSPRCGTELLFATRTGTRLGIETHLFRAETTK
ELSLWTRHIVNACHASAEMIKEVTTSCLYHSQECRLVIHYEKGFSVLTDPTVRDEVDGEE
RAVNTSIKPQALLSYPFEKLKMSSDDGIRMLYLDFGEKQGEIQLDLHSCPKPIVFILHSF
LSAKISRLGLVA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagcagcggcgggggtgtcgggtggctccggtgcgcgcaaaagtggattt
ttggaggttttggtgcgggagcggtggcacaaagttttggtgaacttgggcgaggacgcg
ctcacgctgagctgcgaggaggaggacgacgccgggaataataacgaccacgtccactcc
aacggcgtcaccaacgggtcttacctggacaacaggaacgccaactccaacaacggtcct
gtgcaggctcaggctgtgcgcaccgcgttcaccgacctgccggagcgcgtccccgaggcc
atcgccaacagaaagcgctgcgttaaggtgaccaagcaggacgtcggaggactcggcata
agcattaaaggggggaaggagaacaaaatgcccatcctcattagtaagatatttaagggg
ctcgcagcggaccagacccaggctctgtatgtcggggacgccatcctctccgtgaacagc
gtgaacctgcgcgacgcgacccacgacgaggctgtgcaggcgctgaaacaagccggccgg
gaggtgacgctggaagtcaagtacatgcgtgaggccacgccatatgtcaaaaagggctct
cctgtgtcggagatcagctgggaggccccgcctcccgagtctccacgccccagcagccct
cccgtcaccacaccctttgacctcccaagtcctcctacccagccctccctgtcactaaac
ggcgacaggagatgcataccgctgaagatgtgttatgtaacacgagccatgaccacacca
gatcctgagaacagacaactggagctgcactctcctgatgccagacacagcctagtgctc
cggtgcccagaccaaccatctgccctgtcctggttctctgccatgcactcggtcacatca
acactggctcagcgggcactagtggaggtcatccacaatacttccaagatggggattgct
gccagtaaagagatgcgacacctgggatggctggcaggcaagacagagagtgagaagcag
tgctggaagccggtgctggtggtgatgacagagaaggacctgttgctgtacgacagtttt
ccacgaggcagagaggcctggcagagccctgcacatgtttttccacttttagcaacacgt
ctggtccactctggccctgatcgagggtcacctcgctgcggcacagagctgctctttgct
actcggactggcacacgacttggcatagagactcaccttttccgggctgagaccaccaag
gagctatccctctggaccagacacattgtcaatgcatgccatgcatctgctgagatgatc
aaggaagtcacgacaagctgcctgtaccacagtcaggagtgccggctggtgatccattac
gagaagggcttttctgtgttgaccgacccaacagtcagagatgaggtggatggtgaagag
agagcagttaatacttctatcaagccccaagcactcctctcctacccctttgaaaaacta
aagatgtcctcggatgacggaatacggatgctctatctcgactttggagagaagcagggg
gagattcaactggaccttcattcatgtccgaagccaatcgtcttcatcctccactccttc
ctctctgcaaagatctcccgcctaggtctggtggcctga
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